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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSP90AB1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
418.8
Number of samples
64
Samples
Sample
Description
pTPM
TCGA-KN-8427-01A
54 years, male, white, stage:Stage IV, alive, 30 days
1537.9
TCGA-KL-8344-01A
51 years, male, white, stage:Stage III, alive, 876 days
830.8
TCGA-KM-8639-01A
67 years, male, white, stage:Stage I, alive, 953 days
758.1
TCGA-KN-8436-01A
62 years, male, white, stage:Stage II, alive, 1288 days
751.4
TCGA-KL-8345-01A
75 years, male, white, stage:Stage III, alive, 1665 days
722.4
TCGA-KL-8343-01A
72 years, male, white, stage:Stage III, dead, 2172 days
708.8
TCGA-KL-8331-01A
48 years, female, white, stage:Stage II, alive, 3010 days
659.2
TCGA-KN-8435-01A
59 years, male, white, stage:Stage II, alive, 3498 days
657.2
TCGA-KN-8429-01A
38 years, female, white, stage:Stage III, alive, 2650 days
616.9
TCGA-KN-8418-01A
41 years, female, white, stage:Stage II, alive, 3935 days
599.1
TCGA-KL-8339-01A
67 years, male, white, stage:Stage IV, dead, 855 days
549.2
TCGA-KM-8442-01A
38 years, male, stage:Stage II, alive, 1437 days
549.1
TCGA-KL-8334-01A
37 years, female, white, stage:Stage III, alive, 2949 days
549.0
TCGA-KO-8417-01A
30 years, female, white, stage:Stage I, alive, 2815 days
539.5
TCGA-KL-8328-01A
60 years, male, white, stage:Stage II, alive, 3127 days
524.8
TCGA-KO-8413-01A
46 years, male, white, stage:Stage I, alive, 3038 days
524.7
TCGA-KM-8443-01A
57 years, male, white, stage:Stage II, alive, 1520 days
488.5
TCGA-KL-8341-01A
41 years, male, asian, stage:Stage IV, dead, 754 days
461.0
TCGA-KN-8432-01A
86 years, female, white, stage:Stage II, alive, 76 days
451.2
TCGA-KO-8411-01A
58 years, male, white, stage:Stage I, alive, 3958 days
440.1
TCGA-KN-8423-01A
44 years, male, white, stage:Stage I, alive, 788 days
435.1
TCGA-KO-8406-01A
17 years, female, white, stage:Stage I, alive, 3145 days
431.9
TCGA-KO-8414-01A
50 years, female, white, stage:Stage II, alive, 3212 days
430.0
TCGA-KL-8329-01A
57 years, female, asian, stage:Stage I, alive, 2752 days
426.7
TCGA-KL-8323-01A
57 years, female, white, stage:Stage III, dead, 1158 days
425.8
TCGA-KL-8333-01A
69 years, male, white, stage:Stage II, alive, 2991 days
424.0
TCGA-KN-8434-01A
65 years, female, white, stage:Stage II, alive, 1797 days
422.3
TCGA-KL-8325-01A
56 years, female, white, stage:Stage II, dead, 725 days
420.4
TCGA-KL-8330-01A
44 years, female, black or african american, stage:Stage II, alive, 3304 days
418.6
TCGA-KL-8326-01A
69 years, male, white, stage:Stage III, alive, 3322 days
400.4
TCGA-KL-8340-01A
34 years, male, white, stage:Stage II, alive, 2024 days
397.4
TCGA-KM-8440-01A
37 years, male, black or african american, stage:Stage III, alive, 1366 days
387.9
TCGA-KN-8424-01A
42 years, female, white, stage:Stage I, alive, 1983 days
387.2
TCGA-KN-8428-01A
71 years, male, white, stage:Stage II, dead, 1590 days
376.3
TCGA-KO-8407-01A
42 years, male, white, stage:Stage II, alive, 2820 days
372.8
TCGA-KN-8419-01A
43 years, male, black or african american, stage:Stage II, alive, 714 days
366.2
TCGA-KN-8426-01A
50 years, male, white, stage:Stage IV, alive, 108 days
362.7
TCGA-KN-8421-01A
47 years, female, white, stage:Stage II, alive, 2674 days
359.7
TCGA-KO-8410-01A
74 years, female, white, stage:Stage I, alive, 3136 days
359.2
TCGA-KM-8441-01A
61 years, female, white, stage:Stage I, alive, 876 days
336.9
TCGA-KM-8477-01A
56 years, male, white, stage:Stage I, alive, 1553 days
333.3
TCGA-KL-8338-01A
51 years, male, white, stage:Stage III, alive, 2633 days
315.2
TCGA-KN-8425-01A
53 years, male, white, stage:Stage I, alive, 3179 days
304.6
TCGA-KL-8346-01A
62 years, male, white, stage:Stage II, alive, 1897 days
301.0
TCGA-KL-8335-01A
67 years, male, white, stage:Stage III, alive, 2815 days
288.3
TCGA-KL-8332-01A
55 years, male, white, stage:Stage I, alive, 2582 days
286.2
TCGA-KL-8342-01A
45 years, female, white, stage:Stage II, alive, 2248 days
284.8
TCGA-KL-8337-01A
26 years, male, black or african american, stage:Stage II, alive, 1364 days
272.5
TCGA-KL-8336-01A
51 years, female, white, stage:Stage IV, dead, 920 days
265.1
TCGA-KO-8405-01A
29 years, male, white, stage:Stage III, alive, 3056 days
263.6
TCGA-KL-8324-01A
67 years, female, white, stage:Stage II, alive, 4676 days
257.2
TCGA-KM-8438-01A
45 years, female, white, stage:Stage II, alive, 4622 days
256.3
TCGA-KO-8404-01A
78 years, male, white, stage:Stage IV, dead, 325 days
250.3
TCGA-KN-8433-01A
46 years, female, white, stage:Stage III, alive, 341 days
243.9
TCGA-KO-8403-01A
49 years, male, white, stage:Stage I, alive, 3208 days
242.9
TCGA-KN-8437-01A
42 years, female, white, stage:Stage I, alive, 3068 days
237.1
TCGA-KO-8415-01A
44 years, female, white, stage:Stage I, alive, 2939 days
234.7
TCGA-KO-8416-01A
41 years, male, white, stage:Stage III, alive, 2752 days
214.6
TCGA-KL-8327-01A
46 years, female, white, stage:Stage I, alive, 4169 days
209.5
TCGA-KM-8439-01A
30 years, male, white, stage:Stage I, alive, 708 days
207.0
TCGA-KN-8431-01A
35 years, female, stage:Stage II, alive, 588 days
206.4
TCGA-KO-8408-01A
47 years, male, white, stage:Stage III, dead, 507 days
196.1
TCGA-KM-8476-01A
47 years, male, white, stage:Stage I, alive, 3745 days
141.4
TCGA-KO-8409-01A
69 years, male, white, stage:Stage II, alive, 3180 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSP90AB1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
598.5
Number of samples
521
Samples
Sample
Description
pTPM
TCGA-B0-4696-01A
58 years, male, white, stage:Stage III, dead, 866 days
2511.8
TCGA-B0-5098-01A
53 years, female, black or african american, stage:Stage I, dead, 1584 days
1704.9
TCGA-CZ-4860-01A
60 years, male, white, stage:Stage IV, dead, 206 days
1500.2
TCGA-CZ-5454-01A
63 years, male, white, stage:Stage IV, dead, 722 days
1406.0
TCGA-CW-6090-01A
68 years, male, white, stage:Stage I, alive, 2552 days
1367.8
TCGA-B0-5113-01A
69 years, female, white, stage:Stage III, alive, 1175 days
1318.2
TCGA-CZ-5463-01A
76 years, male, white, stage:Stage II, alive, 662 days
1189.1
TCGA-BP-4781-01A
78 years, male, white, stage:Stage I, alive, 2080 days
1185.5
TCGA-CJ-4639-01A
49 years, female, white, stage:Stage II, alive, 3229 days
1161.0
TCGA-BP-5004-01A
53 years, male, white, stage:Stage I, alive, 1126 days
1130.9
TCGA-BP-4986-01A
75 years, male, white, stage:Stage I, alive, 785 days
1112.7
TCGA-CZ-5982-01A
59 years, female, white, stage:Stage I, alive, 2439 days
1106.2
TCGA-B2-5636-01A
79 years, male, white, stage:Stage I, alive, 919 days
1084.7
TCGA-B4-5835-01A
64 years, female, white, stage:Stage I, alive, 16 days
1084.0
TCGA-B4-5378-01A
62 years, male, white, stage:Stage I, alive, 175 days
1077.3
TCGA-BP-4174-01A
49 years, male, white, stage:Stage II, alive, 1879 days
1068.1
TCGA-BP-5192-01A
59 years, male, white, stage:Stage I, alive, 714 days
1067.7
TCGA-BP-5173-01A
75 years, male, white, stage:Stage I, dead, 62 days
1062.1
TCGA-CZ-5467-01A
86 years, female, white, stage:Stage III, dead, 73 days
1055.5
TCGA-CW-5583-01A
51 years, female, white, stage:Stage I, alive, 2489 days
1050.3
TCGA-BP-4177-01A
65 years, male, white, stage:Stage I, alive, 1670 days
1049.1
TCGA-CZ-5462-01A
83 years, male, white, stage:Stage IV, dead, 311 days
1044.9
TCGA-B8-5159-01A
61 years, female, white, stage:Stage I, alive, 722 days
1041.0
TCGA-BP-4965-01A
46 years, male, white, stage:Stage I, alive, 1871 days
1040.3
TCGA-CJ-5686-01A
59 years, female, white, stage:Stage I, alive, 2038 days
1034.1
TCGA-CJ-5681-01A
44 years, female, white, stage:Stage IV, dead, 552 days
1026.5
TCGA-B0-5402-01A
64 years, male, white, stage:Stage IV, alive, 1290 days
1024.0
TCGA-CW-6097-01A
32 years, male, white, stage:Stage III, dead, 571 days
1019.9
TCGA-CZ-5985-01A
58 years, male, white, stage:Stage II, alive, 1997 days
991.4
TCGA-BP-4768-01A
72 years, female, white, stage:Stage I, alive, 400 days
972.0
TCGA-B4-5834-01A
59 years, male, white, stage:Stage I, alive, 38 days
957.2
TCGA-BP-4976-01A
77 years, male, white, stage:Stage I, alive, 1632 days
950.4
TCGA-B8-5165-01A
43 years, male, white, stage:Stage I, alive, 737 days
939.7
TCGA-CW-6093-01A
73 years, male, white, stage:Stage I, alive, 3146 days
928.5
TCGA-BP-5177-01A
46 years, female, white, stage:Stage I, alive, 293 days
927.7
TCGA-CZ-4861-01A
63 years, male, white, stage:Stage II, dead, 446 days
924.5
TCGA-CZ-5465-01A
76 years, female, stage:Stage III, dead, 2564 days
922.3
TCGA-BP-4790-01A
76 years, male, white, stage:Stage I, dead, 1111 days
922.2
TCGA-DV-5567-01A
40 years, female, black or african american, stage:Stage I, alive, 2004 days
921.0
TCGA-CW-5580-01A
73 years, female, white, stage:Stage IV, dead, 1964 days
919.7
TCGA-B2-4101-01A
52 years, male, white, stage:Stage II, alive, 648 days
916.7
TCGA-BP-4985-01A
72 years, male, white, stage:Stage III, dead, 952 days
909.6
TCGA-B0-4701-01A
66 years, female, white, stage:Stage IV, dead, 238 days
902.1
TCGA-B2-5639-01A
46 years, male, white, stage:Stage IV, dead, 1003 days
900.3
TCGA-B0-4699-01A
74 years, male, white, stage:Stage IV, dead, 110 days
900.3
TCGA-G6-A8L8-01A
62 years, female, black or african american, stage:Stage I, dead, 1091 days
892.1
TCGA-DV-5575-01A
52 years, female, white, stage:Stage I, alive, 1729 days
885.3
TCGA-CW-5590-01A
51 years, male, white, stage:Stage IV, dead, 1075 days
883.7
TCGA-BP-4760-01A
69 years, male, black or african american, stage:Stage I, alive, 2361 days
875.5
TCGA-BP-4765-01A
43 years, male, white, stage:Stage I, alive, 2184 days
874.4
TCGA-B0-5116-01A
52 years, male, white, stage:Stage III, alive, 1274 days
867.5
TCGA-B8-A54F-01A
49 years, female, black or african american, stage:Stage I, alive, 519 days
867.5
TCGA-DV-5576-01A
55 years, female, black or african american, stage:Stage I, dead, 727 days
866.1
TCGA-CZ-5461-01A
52 years, male, white, stage:Stage IV, dead, 330 days
863.1
TCGA-B0-5693-01A
47 years, female, white, stage:Stage I, alive, 4074 days
862.6
TCGA-BP-4983-01A
67 years, female, asian, stage:Stage III, alive, 1413 days
862.6
TCGA-CZ-5986-01A
61 years, male, white, stage:Stage I, alive, 373 days
861.9
TCGA-AK-3431-01A
62 years, female, white, stage:Stage II, dead, 2241 days
860.0
TCGA-BP-4173-01A
47 years, male, white, stage:Stage II, alive, 1893 days
858.1
TCGA-CZ-4857-01A
56 years, male, white, stage:Stage IV, dead, 1432 days
854.4
TCGA-DV-5569-01A
29 years, female, white, stage:Stage I, alive, 355 days
853.3
TCGA-CJ-4899-01A
42 years, male, asian, stage:Stage I, alive, 1528 days
853.0
TCGA-CW-6087-01A
61 years, male, white, stage:Stage IV, dead, 41 days
852.2
TCGA-A3-A6NI-01A
47 years, male, black or african american, stage:Stage I, alive, 1018 days
848.9
TCGA-A3-3328-01A
79 years, male, white, stage:Stage I, alive, 1385 days
847.6
TCGA-A3-3349-01A
34 years, female, white, stage:Stage I, alive, 1385 days
846.8
TCGA-B8-5553-01A
67 years, female, white, stage:Stage I, alive, 435 days
845.2
TCGA-AK-3428-01A
62 years, male, white, stage:Stage III, alive, 3728 days
844.2
TCGA-A3-A6NL-01A
49 years, female, black or african american, stage:Stage I, alive, 689 days
840.6
TCGA-A3-3382-01A
69 years, male, white, stage:Stage I, alive, 574 days
838.7
TCGA-A3-3362-01A
60 years, female, white, stage:Stage I, alive, 1559 days
830.0
TCGA-A3-3320-01A
52 years, female, white, stage:Stage I, alive, 1508 days
826.1
TCGA-BP-4970-01A
44 years, male, asian, stage:Stage III, alive, 433 days
824.6
TCGA-BP-5187-01A
54 years, male, white, stage:Stage I, alive, 406 days
824.3
TCGA-B0-4703-01A
51 years, male, white, stage:Stage IV, dead, 182 days
823.3
TCGA-DV-5573-01A
41 years, male, white, stage:Stage I, alive, 1130 days
823.1
TCGA-CZ-5455-01A
63 years, male, white, stage:Stage IV, dead, 561 days
819.2
TCGA-B0-5701-01A
65 years, male, white, stage:Stage III, alive, 2461 days
818.2
TCGA-CJ-4897-01A
79 years, female, white, stage:Stage III, alive, 3341 days
817.7
TCGA-EU-5905-01A
67 years, female, white, stage:Stage I, alive, 119 days
817.6
TCGA-B0-5094-01A
62 years, male, white, stage:Stage IV, dead, 333 days
816.1
TCGA-BP-4326-01A
53 years, female, white, stage:Stage I, dead, 1625 days
815.8
TCGA-BP-5008-01A
46 years, male, white, stage:Stage I, alive, 1071 days
812.7
TCGA-BP-4762-01A
42 years, male, white, stage:Stage I, dead, 1343 days
812.7
TCGA-BP-4784-01A
67 years, female, white, stage:Stage I, alive, 1854 days
807.7
TCGA-CJ-4904-01A
60 years, female, white, stage:Stage IV, alive, 3302 days
806.2
TCGA-BP-4801-01A
57 years, male, white, stage:Stage I, alive, 1124 days
804.7
TCGA-B8-A7U6-01A
54 years, female, black or african american, stage:Stage I, alive, 495 days
804.5
TCGA-BP-4961-01A
47 years, male, white, stage:Stage I, alive, 1935 days
803.8
TCGA-A3-3370-01A
48 years, female, white, stage:Stage I, alive, 2274 days
801.7
TCGA-CZ-4854-01A
68 years, male, white, stage:Stage I, dead, 1404 days
801.0
TCGA-CJ-4905-01A
62 years, female, white, stage:Stage I, alive, 1496 days
799.5
TCGA-B0-5097-01A
59 years, female, white, stage:Stage III, alive, 665 days
799.5
TCGA-CW-5585-01A
51 years, male, white, stage:Stage IV, alive, 2609 days
799.4
TCGA-B0-5695-01A
61 years, female, white, stage:Stage I, alive, 2150 days
798.6
TCGA-CZ-4859-01A
59 years, female, white, stage:Stage I, alive, 1787 days
797.3
TCGA-CZ-4863-01A
51 years, female, white, stage:Stage III, alive, 1928 days
795.3
TCGA-A3-3376-01A
51 years, male, black or african american, stage:Stage I, dead, 1696 days
794.0
TCGA-A3-3351-01A
42 years, male, white, stage:Stage II, alive, 910 days
793.6
TCGA-B2-5641-01A
79 years, male, white, stage:Stage I, alive, 656 days
793.4
TCGA-BP-4343-01A
64 years, male, white, stage:Stage III, dead, 1912 days
792.8
TCGA-CJ-5684-01A
61 years, male, white, stage:Stage III, alive, 2231 days
792.4
TCGA-BP-4789-01A
48 years, male, white, stage:Stage I, alive, 1489 days
789.5
TCGA-AK-3443-01A
45 years, male, white, stage:Stage II, alive, 1423 days
787.8
TCGA-CJ-4894-01A
58 years, male, white, stage:Stage III, dead, 841 days
787.8
TCGA-B8-5163-01A
63 years, female, white, stage:Stage III, alive, 822 days
785.0
TCGA-CW-5587-01A
62 years, female, white, stage:Stage III, alive, 2226 days
781.7
TCGA-BP-4972-01A
43 years, female, white, stage:Stage III, alive, 1502 days
780.2
TCGA-B0-4698-01A
75 years, male, white, stage:Stage IV, dead, 42 days
780.1
TCGA-B0-5110-01A
71 years, female, white, stage:Stage I, alive, 2009 days
774.8
TCGA-BP-4354-01A
40 years, male, white, stage:Stage IV, dead, 1034 days
771.6
TCGA-CZ-5988-01A
38 years, male, white, stage:Stage I, alive, 693 days
770.5
TCGA-B8-5549-01A
53 years, male, white, stage:Stage I, alive, 194 days
769.3
TCGA-BP-5170-01A
55 years, male, white, stage:Stage I, alive, 2412 days
766.6
TCGA-A3-3325-01A
52 years, male, white, stage:Stage I, dead, 1170 days
760.1
TCGA-BP-5186-01A
50 years, female, white, stage:Stage I, alive, 693 days
756.5
TCGA-BP-4987-01A
41 years, female, asian, stage:Stage I, alive, 1124 days
755.8
TCGA-B2-4102-01A
61 years, male, white, stage:Stage I, alive, 952 days
755.2
TCGA-EU-5906-01A
55 years, male, white, stage:Stage I, alive, 206 days
753.7
TCGA-B0-5691-01A
66 years, female, white, stage:Stage I, alive, 3431 days
752.9
TCGA-CZ-5984-01A
51 years, male, white, stage:Stage I, alive, 2067 days
752.3
TCGA-B0-4823-01A
88 years, male, white, stage:Stage I, dead, 454 days
749.9
TCGA-BP-4353-01A
61 years, male, white, stage:Stage I, dead, 375 days
749.7
TCGA-BP-4766-01A
43 years, female, white, stage:Stage I, alive, 1462 days
748.3
TCGA-AK-3445-01A
69 years, male, white, stage:Stage III, alive, 2392 days
747.7
TCGA-A3-A8CQ-01A
59 years, female, black or african american, stage:Stage I, alive, 3 days
746.6
TCGA-CW-5581-01A
44 years, male, white, stage:Stage I, alive, 2799 days
746.3
TCGA-B0-5699-01A
53 years, male, white, stage:Stage I, alive, 3841 days
744.9
TCGA-CW-5591-01A
56 years, male, white, stage:Stage IV, alive, 2271 days
744.6
TCGA-EU-5904-01A
47 years, female, white, stage:Stage I, alive, 551 days
742.9
TCGA-B0-4690-01A
65 years, male, white, stage:Stage IV, dead, 43 days
740.0
TCGA-B8-5164-01A
65 years, male, white, stage:Stage III, alive, 26 days
738.8
TCGA-A3-3387-01A
49 years, male, white, stage:Stage I, alive, 617 days
736.8
TCGA-CJ-4920-01A
64 years, female, white, stage:Stage I, dead, 139 days
732.4
TCGA-A3-3367-01A
72 years, male, white, stage:Stage I, alive, 2270 days
732.3
TCGA-B0-5711-01A
50 years, male, white, stage:Stage III, alive, 3989 days
731.6
TCGA-CJ-5675-01A
70 years, male, white, stage:Stage II, alive, 3936 days
731.4
TCGA-B0-5106-01A
64 years, male, white, stage:Stage I, dead, 1598 days
728.8
TCGA-B0-5812-01A
53 years, male, white, stage:Stage I, alive, 3834 days
727.9
TCGA-B0-5710-01A
57 years, male, white, stage:Stage I, alive, 2430 days
727.9
TCGA-BP-4998-01A
49 years, male, asian, stage:Stage I, alive, 932 days
727.9
TCGA-B0-5102-01A
74 years, female, white, stage:Stage I, dead, 2764 days
725.3
TCGA-BP-5183-01A
57 years, male, white, stage:Stage III, alive, 1291 days
724.0
TCGA-B8-5551-01A
65 years, female, black or african american, stage:Stage I, alive, 16 days
722.5
TCGA-CZ-5469-01A
41 years, male, white, stage:Stage II, dead, 946 days
718.7
TCGA-CJ-5680-01A
65 years, female, white, stage:Stage IV, dead, 768 days
718.6
TCGA-B0-5705-01A
65 years, female, white, stage:Stage I, alive, 4537 days
718.5
TCGA-B0-5120-01A
72 years, female, white, stage:Stage I, alive, 1169 days
716.4
TCGA-CZ-4864-01A
86 years, male, white, stage:Stage II, dead, 1315 days
715.9
TCGA-CW-5588-01A
78 years, female, white, stage:Stage I, alive, 2017 days
714.3
TCGA-B4-5843-01A
45 years, male, white, stage:Stage I, alive, 11 days
712.0
TCGA-B0-5077-01A
77 years, male, white, stage:Stage I, dead, 1317 days
709.3
TCGA-CZ-5466-01A
67 years, male, stage:Stage III, alive, 685 days
708.6
TCGA-B2-5635-01A
74 years, male, white, stage:Stage I, alive, 755 days
708.6
TCGA-CW-5589-01A
52 years, male, white, stage:Stage I, alive, 2378 days
706.3
TCGA-CJ-5678-01A
62 years, male, black or african american, stage:Stage IV, dead, 574 days
705.1
TCGA-B0-5713-01A
75 years, female, white, stage:Stage III, alive, 2782 days
704.8
TCGA-BP-4975-01A
40 years, male, white, stage:Stage I, alive, 1433 days
703.8
TCGA-A3-3317-01A
67 years, male, stage:Stage II, alive, 1491 days
702.3
TCGA-B8-A54H-01A
69 years, female, black or african american, stage:Stage II, alive, 256 days
701.3
TCGA-A3-3308-01A
77 years, female, white, stage:Stage III, alive, 16 days
700.8
TCGA-GK-A6C7-01A
76 years, female, black or african american, stage:Stage I, alive, 61 days
698.3
TCGA-CJ-4908-01A
38 years, male, white, stage:Stage I, alive, 1531 days
698.2
TCGA-A3-A8OV-01A
75 years, male, black or african american, stage:Stage I, alive, 340 days
696.9
TCGA-BP-4991-01A
54 years, male, white, stage:Stage I, alive, 1413 days
696.3
TCGA-B4-5838-01A
52 years, male, white, stage:'--, alive, 166 days
695.6
TCGA-AK-3461-01A
72 years, male, white, stage:Stage I, alive, 2217 days
694.7
TCGA-B0-4814-01A
58 years, male, white, stage:Stage IV, dead, 168 days
694.7
TCGA-A3-3380-01A
54 years, male, stage:Stage I, alive, 567 days
693.9
TCGA-CJ-4886-01A
42 years, female, white, stage:Stage I, alive, 1952 days
692.7
TCGA-B0-5709-01A
62 years, female, white, stage:Stage III, alive, 3974 days
692.2
TCGA-A3-3324-01A
51 years, male, white, stage:Stage I, alive, 1186 days
691.6
TCGA-B0-5119-01A
61 years, female, white, stage:Stage I, alive, 1552 days
690.8
TCGA-A3-3358-01A
57 years, female, white, stage:Stage I, alive, 1307 days
690.6
TCGA-B0-5712-01A
68 years, female, black or african american, stage:Stage IV, alive, 2722 days
687.9
TCGA-BP-4331-01A
52 years, male, white, stage:Stage I, dead, 2454 days
686.8
TCGA-BP-4332-01A
36 years, male, white, stage:Stage III, alive, 1133 days
686.3
TCGA-A3-3352-01A
74 years, male, white, stage:Stage III, dead, 561 days
685.2
TCGA-A3-3307-01A
66 years, male, stage:Stage III, alive, 1436 days
684.0
TCGA-BP-4763-01A
79 years, female, white, stage:Stage I, dead, 1270 days
681.2
TCGA-CJ-4918-01A
64 years, male, white, stage:Stage IV, dead, 93 days
679.9
TCGA-BP-4329-01A
75 years, male, white, stage:Stage III, dead, 845 days
679.8
TCGA-MW-A4EC-01A
72 years, female, black or african american, stage:Stage I, alive, 498 days
678.7
TCGA-BP-4774-01A
57 years, female, white, stage:Stage I, alive, 1885 days
677.3
TCGA-B8-5546-01A
38 years, female, black or african american, stage:Stage I, alive, 505 days
677.1
TCGA-BP-4162-01A
65 years, female, white, stage:Stage I, alive, 3074 days
675.5
TCGA-BP-4338-01A
43 years, male, white, stage:Stage I, alive, 2859 days
674.3
TCGA-B0-5096-01A
72 years, female, white, stage:Stage III, dead, 68 days
673.8
TCGA-BP-4166-01A
69 years, male, white, stage:Stage III, alive, 13 days
672.9
TCGA-CJ-5683-01A
78 years, male, white, stage:Stage I, alive, 1889 days
672.2
TCGA-BP-4964-01A
54 years, female, white, stage:Stage I, alive, 1862 days
671.7
TCGA-B8-4151-01A
51 years, female, white, stage:Stage III, alive, 1299 days
670.4
TCGA-BP-5194-01A
39 years, male, white, stage:Stage I, alive, 408 days
670.1
TCGA-B8-A54K-01A
61 years, male, black or african american, stage:Stage I, alive, 469 days
670.1
TCGA-B8-5550-01A
71 years, male, white, stage:Stage III, alive, 1476 days
669.1
TCGA-CJ-4868-01A
42 years, male, white, stage:Stage IV, dead, 646 days
668.8
TCGA-AS-3778-01A
35 years, male, white, stage:Stage I, alive, 43 days
668.0
TCGA-B2-A4SR-01A
61 years, male, black or african american, stage:Stage II, alive, 507 days
667.5
TCGA-A3-3383-01A
52 years, male, white, stage:Stage I, alive, 861 days
667.3
TCGA-BP-4795-01A
74 years, female, white, stage:Stage I, alive, 620 days
666.4
TCGA-DV-A4W0-01A
55 years, male, black or african american, stage:Stage I, alive, 2470 days
665.4
TCGA-BP-4995-01A
68 years, male, white, stage:Stage I, alive, 1371 days
665.3
TCGA-BP-4807-01A
42 years, male, white, stage:Stage I, alive, 211 days
665.1
TCGA-BP-4176-01A
64 years, male, white, stage:Stage I, alive, 1955 days
663.8
TCGA-CZ-5456-01A
57 years, male, white, stage:Stage II, alive, 2422 days
662.8
TCGA-BP-4977-01A
57 years, male, white, stage:Stage I, alive, 454 days
662.5
TCGA-A3-3359-01A
82 years, female, white, stage:Stage I, alive, 2504 days
661.7
TCGA-BP-5181-01A
58 years, female, white, stage:Stage I, alive, 1495 days
661.5
TCGA-B0-5399-01A
46 years, male, white, stage:Stage I, alive, 1411 days
659.4
TCGA-BP-4164-01A
51 years, female, white, stage:Stage III, dead, 992 days
659.4
TCGA-B2-3924-01A
73 years, male, white, stage:Stage I, alive, 1092 days
659.0
TCGA-BP-4974-01A
58 years, male, white, stage:Stage IV, dead, 211 days
657.3
TCGA-B4-5844-01A
61 years, female, white, stage:Stage II, alive, 7 days
655.5
TCGA-CJ-4893-01A
76 years, female, white, stage:Stage I, alive, 750 days
651.4
TCGA-BP-5196-01A
53 years, male, white, stage:Stage I, alive, 1018 days
650.5
TCGA-B0-5690-01A
53 years, female, white, stage:Stage I, alive, 3392 days
644.5
TCGA-AK-3450-01A
85 years, female, white, stage:Stage I, alive, 1508 days
642.7
TCGA-B0-4710-01A
75 years, female, white, stage:Stage III, alive, 1755 days
638.9
TCGA-B8-4619-01A
58 years, male, white, stage:Stage I, alive, 523 days
638.8
TCGA-BP-4160-01A
67 years, male, white, stage:Stage III, alive, 2881 days
638.2
TCGA-DV-5565-01A
59 years, male, white, stage:Stage I, alive, 1329 days
637.1
TCGA-B8-4622-01A
57 years, male, white, stage:Stage IV, alive, 1525 days
635.5
TCGA-CW-6088-01A
60 years, male, white, stage:Stage I, alive, 3222 days
634.4
TCGA-CJ-4907-01A
58 years, male, white, stage:Stage III, alive, 1499 days
631.1
TCGA-BP-5202-01A
75 years, male, white, stage:Stage III, alive, 29 days
629.4
TCGA-B0-5692-01A
66 years, female, white, stage:Stage III, alive, 3944 days
629.3
TCGA-BP-5182-01A
56 years, male, white, stage:Stage I, alive, 1165 days
629.0
TCGA-BP-5200-01A
44 years, male, white, stage:Stage II, alive, 1063 days
627.6
TCGA-BP-4344-01A
75 years, female, white, stage:Stage I, alive, 1666 days
627.4
TCGA-BP-4982-01A
42 years, male, white, stage:Stage I, alive, 1014 days
627.3
TCGA-B0-4852-01A
78 years, female, white, stage:Stage II, dead, 1121 days
626.3
TCGA-A3-3322-01A
51 years, male, white, stage:Stage I, alive, 1478 days
626.3
TCGA-CJ-4643-01A
67 years, female, white, stage:Stage II, alive, 1793 days
626.1
TCGA-B8-4620-01A
70 years, female, white, stage:Stage III, alive, 777 days
624.3
TCGA-B0-5703-01A
73 years, male, white, stage:Stage I, alive, 2246 days
624.2
TCGA-B0-4845-01A
70 years, male, white, stage:Stage IV, dead, 1986 days
623.4
TCGA-AK-3429-01A
54 years, female, white, stage:Stage II, alive, 3328 days
621.6
TCGA-CJ-4874-01A
73 years, female, white, stage:Stage I, alive, 2283 days
620.8
TCGA-BP-4787-01A
59 years, female, white, stage:Stage IV, dead, 480 days
620.1
TCGA-BP-4994-01A
54 years, male, white, stage:Stage I, alive, 1308 days
619.8
TCGA-B0-4693-01A
72 years, female, white, stage:Stage III, dead, 77 days
618.4
TCGA-CJ-6032-01A
63 years, female, white, stage:Stage II, alive, 3639 days
618.2
TCGA-BP-5189-01A
60 years, male, white, stage:Stage I, dead, 822 days
617.8
TCGA-BP-4340-01A
70 years, female, white, stage:Stage I, dead, 562 days
616.8
TCGA-CW-5584-01A
74 years, male, white, stage:Stage III, dead, 164 days
613.4
TCGA-A3-3331-01A
86 years, female, white, stage:Stage I, alive, 1257 days
611.0
TCGA-B4-5836-01A
61 years, female, white, stage:Stage I, alive, 141 days
608.9
TCGA-CJ-4878-01A
71 years, female, white, stage:Stage III, alive, 2186 days
608.8
TCGA-A3-3357-01A
62 years, male, white, stage:Stage II, alive, 2688 days
606.5
TCGA-BP-4963-01A
63 years, male, white, stage:Stage I, alive, 1834 days
604.9
TCGA-A3-3343-01A
79 years, male, white, stage:Stage II, alive, 945 days
604.8
TCGA-A3-3372-01A
64 years, male, white, stage:Stage III, alive, 735 days
603.9
TCGA-B0-5697-01A
50 years, male, white, stage:Stage I, alive, 2630 days
603.1
TCGA-BP-4782-01A
55 years, female, white, stage:Stage I, alive, 354 days
603.0
TCGA-B0-4688-01A
46 years, male, white, stage:Stage IV, dead, 101 days
601.9
TCGA-3Z-A93Z-01A
69 years, male, black or african american, stage:Stage I, alive, 385 days
601.8
TCGA-B8-5545-01A
42 years, male, black or african american, stage:Stage I, alive, 1525 days
600.4
TCGA-A3-3326-01A
47 years, male, white, stage:Stage I, alive, 1137 days
597.9
TCGA-A3-3347-01A
76 years, female, white, stage:Stage III, dead, 1610 days
597.3
TCGA-CJ-4870-01A
58 years, female, black or african american, stage:Stage III, alive, 1498 days
596.9
TCGA-CZ-5453-01A
67 years, male, white, stage:Stage II, dead, 2419 days
595.9
TCGA-B0-5700-01A
77 years, male, white, stage:Stage I, alive, 1790 days
595.8
TCGA-BP-4330-01A
60 years, female, black or african american, stage:Stage III, alive, 1888 days
595.1
TCGA-B8-4143-01A
66 years, female, white, stage:Stage IV, dead, 709 days
594.7
TCGA-B0-5694-01A
71 years, male, white, stage:Stage III, dead, 480 days
594.2
TCGA-A3-A6NJ-01A
57 years, female, black or african american, stage:Stage I, alive, 468 days
594.0
TCGA-CZ-4862-01A
46 years, male, white, stage:Stage I, alive, 3271 days
589.4
TCGA-CJ-4885-01A
64 years, male, white, stage:Stage IV, alive, 3451 days
587.8
TCGA-B8-A8YJ-01A
60 years, female, black or african american, stage:Stage I, alive, 431 days
587.6
TCGA-CZ-4858-01A
39 years, male, white, stage:Stage II, dead, 2105 days
586.8
TCGA-CJ-4876-01A
57 years, male, white, stage:Stage II, alive, 1955 days
586.7
TCGA-CJ-6033-01A
54 years, female, white, stage:Stage IV, dead, 224 days
585.4
TCGA-CJ-4637-01A
52 years, female, white, stage:Stage IV, dead, 2227 days
584.4
TCGA-CJ-5677-01A
54 years, female, white, stage:Stage IV, dead, 782 days
583.9
TCGA-B0-4838-01A
69 years, female, white, stage:Stage I, dead, 834 days
580.7
TCGA-B0-5095-01A
81 years, male, white, stage:Stage III, dead, 245 days
580.5
TCGA-B0-5696-01A
69 years, male, white, stage:Stage III, alive, 2609 days
580.4
TCGA-BP-4769-01A
63 years, male, white, stage:Stage I, alive, 1876 days
578.6
TCGA-CJ-4892-01A
65 years, female, white, stage:Stage I, alive, 1521 days
577.4
TCGA-B0-5707-01A
39 years, female, white, stage:Stage I, alive, 3744 days
576.1
TCGA-B0-4945-01A
75 years, female, white, stage:Stage I, dead, 2145 days
573.7
TCGA-B0-5698-01A
77 years, male, black or african american, stage:Stage I, alive, 3631 days
572.6
TCGA-BP-4775-01A
55 years, female, white, stage:Stage I, alive, 1843 days
572.5
TCGA-B0-4846-01A
52 years, male, white, stage:Stage IV, dead, 1200 days
571.7
TCGA-AK-3436-01A
40 years, male, white, stage:Stage IV, alive, 3331 days
571.1
TCGA-BP-5199-01A
58 years, male, white, stage:Stage II, alive, 1355 days
570.5
TCGA-CJ-4903-01A
50 years, male, white, stage:Stage I, alive, 1560 days
570.3
TCGA-BP-4999-01A
56 years, male, white, stage:Stage I, alive, 1266 days
569.6
TCGA-DV-5566-01A
67 years, female, white, stage:Stage I, alive, 1398 days
569.0
TCGA-A3-A8OW-01A
37 years, male, black or african american, stage:Stage III, alive, 323 days
568.4
TCGA-CJ-4644-01A
48 years, female, white, stage:Stage IV, dead, 336 days
568.2
TCGA-T7-A92I-01A
47 years, female, black or african american, stage:Stage I, alive, 356 days
568.1
TCGA-B0-4848-01A
54 years, male, white, stage:Stage III, dead, 883 days
567.1
TCGA-BP-4803-01A
79 years, male, white, stage:Stage III, alive, 204 days
567.1
TCGA-B2-5633-01A
56 years, male, white, stage:Stage I, alive, 963 days
566.7
TCGA-BP-5007-01A
45 years, male, white, stage:Stage II, alive, 1140 days
564.5
TCGA-B2-4098-01A
72 years, female, black or african american, stage:Stage I, dead, 51 days
562.7
TCGA-BP-4170-01A
72 years, female, white, stage:Stage I, dead, 2343 days
562.4
TCGA-CJ-4634-01A
60 years, female, white, stage:Stage I, alive, 3498 days
562.2
TCGA-DV-5574-01A
37 years, male, white, stage:Stage I, alive, 2016 days
561.5
TCGA-CZ-5470-01A
72 years, female, stage:Stage II, alive, 386 days
560.3
TCGA-B0-4718-01A
57 years, male, white, stage:Stage III, alive, 1778 days
560.1
TCGA-BP-4169-01A
76 years, female, white, stage:Stage II, dead, 701 days
558.7
TCGA-CZ-5457-01A
62 years, male, white, stage:Stage III, alive, 2754 days
558.5
TCGA-BP-4347-01A
74 years, male, white, stage:Stage III, alive, 1367 days
556.4
TCGA-CJ-6030-01A
65 years, male, white, stage:Stage I, dead, 2299 days
555.9
TCGA-BP-4342-01A
79 years, male, white, stage:Stage II, dead, 2256 days
555.8
TCGA-CJ-4640-01A
49 years, male, white, stage:Stage III, alive, 3480 days
554.6
TCGA-B0-5109-01A
69 years, male, white, stage:Stage III, dead, 587 days
554.3
TCGA-A3-3323-01A
53 years, male, white, stage:Stage I, alive, 1106 days
553.3
TCGA-BP-4993-01A
58 years, male, white, stage:Stage I, alive, 177 days
553.2
TCGA-CJ-6028-01A
58 years, male, white, stage:Stage IV, dead, 1625 days
552.6
TCGA-BP-5184-01A
54 years, male, white, stage:Stage I, alive, 1133 days
551.9
TCGA-BP-5006-01A
61 years, male, white, stage:Stage I, alive, 840 days
550.7
TCGA-BP-4967-01A
76 years, male, white, stage:Stage III, alive, 205 days
550.7
TCGA-A3-3365-01A
46 years, male, white, stage:Stage I, alive, 873 days
547.4
TCGA-CJ-4895-01A
62 years, male, white, stage:Stage IV, dead, 1200 days
546.4
TCGA-A3-3373-01A
54 years, female, white, stage:Stage I, alive, 1621 days
545.5
TCGA-A3-3329-01A
75 years, male, white, stage:Stage I, alive, 1624 days
545.0
TCGA-CZ-5452-01A
69 years, male, white, stage:Stage II, alive, 1789 days
544.9
TCGA-CJ-5671-01A
51 years, male, white, stage:Stage I, alive, 3987 days
542.4
TCGA-B0-5084-01A
33 years, male, white, stage:Stage IV, dead, 222 days
541.7
TCGA-CJ-5672-01A
84 years, male, white, stage:Stage I, dead, 1972 days
541.0
TCGA-BP-4325-01A
64 years, female, white, stage:Stage I, alive, 2964 days
539.9
TCGA-CJ-4901-01A
47 years, male, white, stage:Stage III, alive, 1450 days
539.8
TCGA-CZ-5458-01A
43 years, male, white, stage:Stage III, alive, 2789 days
539.3
TCGA-CZ-5451-01A
74 years, male, white, stage:Stage II, alive, 1929 days
538.3
TCGA-B8-A54J-01A
60 years, male, black or african american, stage:Stage II, alive, 528 days
537.8
TCGA-B0-4810-01A
47 years, male, white, stage:Stage III, dead, 478 days
536.1
TCGA-AK-3425-01A
68 years, male, white, stage:Stage I, alive, 3343 days
533.8
TCGA-BP-4759-01A
50 years, male, white, stage:Stage I, alive, 2372 days
533.6
TCGA-B8-4148-01A
63 years, female, white, stage:Stage I, alive, 1520 days
530.5
TCGA-BP-5198-01A
72 years, male, white, stage:Stage III, alive, 603 days
528.5
TCGA-A3-A6NN-01A
78 years, male, black or african american, stage:Stage I, alive, 3 days
528.1
TCGA-BP-4158-01A
69 years, male, white, stage:Stage I, alive, 3377 days
524.7
TCGA-B2-3923-01A
59 years, male, white, stage:Stage II, alive, 992 days
522.5
TCGA-EU-5907-01A
81 years, male, white, stage:Stage III, alive, 127 days
520.7
TCGA-AK-3456-01A
48 years, male, black or african american, stage:Stage II, alive, 1143 days
520.6
TCGA-B8-A54E-01A
62 years, female, black or african american, stage:Stage I, alive, 909 days
519.1
TCGA-BP-4163-01A
60 years, female, white, stage:Stage III, alive, 2839 days
518.4
TCGA-B0-4849-01A
51 years, male, white, stage:Stage III, dead, 69 days
515.3
TCGA-A3-3385-01A
46 years, female, white, stage:Stage I, alive, 1993 days
514.7
TCGA-CJ-4902-01A
61 years, male, white, stage:Stage III, alive, 1520 days
514.5
TCGA-CZ-5468-01A
84 years, male, white, stage:Stage IV, dead, 59 days
512.0
TCGA-BP-5174-01A
45 years, female, white, stage:Stage I, alive, 2257 days
510.6
TCGA-B0-5075-01A
77 years, female, white, stage:Stage III, dead, 637 days
509.8
TCGA-CJ-4889-01A
63 years, female, white, stage:Stage I, alive, 1946 days
506.2
TCGA-DV-5568-01A
26 years, male, white, stage:Stage I, alive, 370 days
505.7
TCGA-CZ-4865-01A
70 years, female, white, stage:Stage I, dead, 166 days
505.2
TCGA-DV-A4VZ-01A
53 years, male, black or african american, stage:Stage I, alive, 365 days
502.4
TCGA-CJ-4641-01A
55 years, female, white, stage:Stage IV, dead, 1661 days
500.8
TCGA-CJ-4869-01A
49 years, male, white, stage:Stage III, alive, 2554 days
498.1
TCGA-BP-5195-01A
75 years, male, white, stage:Stage I, alive, 749 days
497.9
TCGA-B0-5107-01A
65 years, female, white, stage:Stage IV, dead, 927 days
497.2
TCGA-B8-5158-01A
56 years, male, white, stage:Stage III, alive, 1218 days
489.4
TCGA-AK-3465-01A
71 years, female, black or african american, stage:Stage I, alive, 369 days
488.6
TCGA-CJ-4872-01A
51 years, male, white, stage:Stage I, alive, 1435 days
487.0
TCGA-A3-3316-01A
57 years, male, white, stage:Stage II, alive, 1493 days
485.3
TCGA-CZ-5459-01A
63 years, male, white, stage:Stage III, alive, 1683 days
484.0
TCGA-AK-3460-01A
58 years, male, white, stage:Stage I, alive, 2508 days
483.3
TCGA-B2-4099-01A
83 years, male, white, stage:Stage I, alive, 972 days
482.9
TCGA-AK-3440-01A
58 years, male, white, stage:Stage I, alive, 2865 days
481.9
TCGA-CJ-5682-01A
60 years, male, white, stage:Stage IV, alive, 3736 days
481.7
TCGA-CZ-4856-01A
62 years, female, white, stage:Stage I, alive, 18 days
481.0
TCGA-A3-3363-01A
50 years, male, asian, stage:Stage II, alive, 319 days
480.3
TCGA-B0-4834-01A
49 years, male, white, stage:Stage I, dead, 2090 days
476.3
TCGA-BP-4777-01A
46 years, male, white, stage:Stage I, alive, 1731 days
474.6
TCGA-B0-4706-01A
61 years, male, white, stage:Stage III, dead, 65 days
474.4
TCGA-BP-4770-01A
73 years, female, white, stage:Stage IV, dead, 329 days
474.4
TCGA-B8-5162-01A
62 years, male, white, stage:Stage II, alive, 36 days
474.2
TCGA-CZ-5460-01A
55 years, male, white, stage:Stage IV, alive, 2873 days
474.0
TCGA-BP-4355-01A
59 years, female, white, stage:Stage III, dead, 953 days
474.0
TCGA-CJ-6031-01A
54 years, male, white, stage:Stage I, alive, 1906 days
473.4
TCGA-BP-4352-01A
74 years, female, white, stage:Stage IV, dead, 344 days
472.3
TCGA-BP-5168-01A
75 years, male, white, stage:Stage I, dead, 1463 days
471.6
TCGA-CZ-5989-01A
60 years, male, white, stage:Stage II, alive, 1905 days
471.5
TCGA-AK-3455-01A
71 years, female, white, stage:Stage III, dead, 683 days
467.9
TCGA-CZ-5464-01A
69 years, male, white, stage:Stage IV, alive, 2128 days
467.7
TCGA-CJ-4916-01A
69 years, female, white, stage:Stage III, alive, 1373 days
465.5
TCGA-B0-5108-01A
54 years, male, white, stage:Stage III, alive, 1782 days
464.3
TCGA-BP-4161-01A
74 years, male, white, stage:Stage I, alive, 2746 days
462.7
TCGA-CZ-4866-01A
79 years, female, white, stage:Stage I, alive, 3267 days
462.4
TCGA-B0-5080-01A
63 years, male, white, stage:Stage IV, dead, 342 days
460.7
TCGA-B0-5099-01A
88 years, female, white, stage:Stage III, dead, 485 days
452.1
TCGA-BP-4341-01A
67 years, male, white, stage:Stage III, dead, 1589 days
449.9
TCGA-B8-A54G-01A
50 years, male, black or african american, stage:Stage I, alive, 53 days
447.2
TCGA-B0-4712-01A
76 years, male, white, stage:Stage IV, dead, 1337 days
445.4
TCGA-B4-5377-01A
68 years, female, white, stage:Stage IV, alive, 365 days
442.4
TCGA-CJ-4636-01A
51 years, male, white, stage:Stage III, alive, 1924 days
442.1
TCGA-CJ-4882-01A
57 years, male, black or african american, stage:Stage III, alive, 1883 days
438.9
TCGA-G6-A8L6-01A
55 years, male, black or african american, stage:Stage IV, dead, 313 days
437.2
TCGA-A3-3346-01A
68 years, male, white, stage:Stage I, dead, 137 days
436.0
TCGA-CJ-4890-01A
72 years, male, white, stage:Stage IV, alive, 3519 days
432.8
TCGA-CJ-4871-01A
63 years, male, white, stage:Stage IV, alive, 2423 days
431.8
TCGA-B0-4691-01A
55 years, male, white, stage:Stage IV, dead, 139 days
426.9
TCGA-B0-4713-01A
76 years, female, white, stage:Stage III, dead, 202 days
425.0
TCGA-BP-4349-01A
68 years, female, white, stage:Stage I, alive, 372 days
421.3
TCGA-A3-3335-01A
41 years, male, white, stage:Stage II, alive, 1886 days
413.9
TCGA-BP-4973-01A
47 years, male, white, stage:Stage III, alive, 1384 days
409.4
TCGA-B0-5092-01A
53 years, female, white, stage:Stage IV, dead, 459 days
408.3
TCGA-BP-4756-01A
62 years, female, asian, stage:Stage I, alive, 374 days
408.2
TCGA-B0-5100-01A
72 years, male, black or african american, stage:Stage III, dead, 1913 days
406.8
TCGA-BP-4969-01A
63 years, female, white, stage:Stage I, alive, 1794 days
405.3
TCGA-BP-4804-01A
59 years, male, white, stage:Stage I, alive, 1459 days
403.9
TCGA-B0-4827-01A
77 years, female, white, stage:Stage III, dead, 885 days
403.1
TCGA-B0-4828-01A
79 years, male, white, stage:Stage IV, dead, 307 days
402.2
TCGA-BP-5201-01A
63 years, male, white, stage:Stage IV, alive, 951 days
397.0
TCGA-AK-3433-01A
48 years, female, white, stage:Stage II, alive, 3409 days
395.9
TCGA-BP-4798-01A
74 years, male, white, stage:'--, dead, 334 days
395.4
TCGA-B0-4839-01A
80 years, female, white, stage:Stage I, dead, 1639 days
392.1
TCGA-BP-4346-01A
57 years, male, white, stage:Stage III, dead, 1493 days
390.3
TCGA-CJ-4884-01A
72 years, female, white, stage:Stage III, alive, 1759 days
389.8
TCGA-BP-4797-01A
34 years, male, white, stage:Stage III, alive, 1107 days
389.4
TCGA-CJ-4635-01A
48 years, male, white, stage:Stage I, alive, 1416 days
389.3
TCGA-B0-4824-01A
49 years, female, white, stage:Stage I, dead, 1657 days
384.4
TCGA-BP-4968-01A
40 years, male, white, stage:Stage I, alive, 1746 days
383.2
TCGA-B0-4815-01A
65 years, male, white, stage:Stage III, dead, 1588 days
382.2
TCGA-BP-4165-01A
64 years, female, white, stage:Stage I, alive, 3037 days
381.1
TCGA-B0-4816-01A
49 years, male, white, stage:Stage II, dead, 1371 days
380.0
TCGA-CJ-4881-01A
41 years, male, white, stage:Stage III, alive, 2014 days
371.9
TCGA-A3-3319-01A
70 years, male, white, stage:Stage I, alive, 1130 days
369.2
TCGA-BP-5176-01A
78 years, female, white, stage:Stage I, dead, 1590 days
368.5
TCGA-A3-3378-01A
60 years, male, white, stage:Stage I, alive, 630 days
365.6
TCGA-B0-4833-01A
82 years, female, white, stage:Stage I, dead, 2386 days
361.9
TCGA-A3-3311-01A
57 years, male, stage:Stage I, dead, 1191 days
361.4
TCGA-CJ-6027-01A
77 years, male, white, stage:Stage I, dead, 3615 days
360.2
TCGA-BP-4758-01A
40 years, male, white, stage:Stage I, alive, 2208 days
354.5
TCGA-AK-3427-01A
65 years, male, white, stage:Stage I, alive, 3583 days
348.0
TCGA-BP-4799-01A
70 years, male, white, stage:Stage III, dead, 1133 days
346.6
TCGA-B0-5706-01A
45 years, male, white, stage:Stage II, alive, 3205 days
346.4
TCGA-BP-4771-01A
62 years, male, white, stage:Stage IV, dead, 162 days
346.1
TCGA-B8-4154-01A
73 years, female, white, stage:Stage I, alive, 1380 days
345.4
TCGA-B0-5088-01A
53 years, male, white, stage:Stage I, dead, 563 days
345.3
TCGA-BP-4345-01A
62 years, male, white, stage:Stage III, alive, 1516 days
341.6
TCGA-CZ-4853-01A
82 years, male, white, stage:Stage I, alive, 774 days
340.8
TCGA-B0-4836-01A
61 years, male, white, stage:Stage IV, dead, 1238 days
339.0
TCGA-BP-4335-01A
65 years, female, white, stage:Stage IV, dead, 475 days
338.1
TCGA-B0-4700-01A
60 years, male, white, stage:Stage IV, dead, 1980 days
331.4
TCGA-B0-4837-01A
63 years, male, white, stage:Stage I, dead, 1378 days
328.3
TCGA-CJ-4638-01A
46 years, female, white, stage:Stage IV, dead, 431 days
325.6
TCGA-CJ-4888-01A
59 years, male, white, stage:Stage IV, dead, 1567 days
325.3
TCGA-BP-4351-01A
51 years, female, white, stage:Stage III, alive, 970 days
323.3
TCGA-MM-A563-01A
41 years, male, black or african american, stage:'--, alive, 591 days
322.3
TCGA-B0-4694-01A
72 years, male, white, stage:Stage III, dead, 106 days
320.3
TCGA-B0-5121-01A
56 years, male, white, stage:Stage I, alive, 1485 days
320.1
TCGA-BP-4989-01A
58 years, male, white, stage:Stage III, alive, 118 days
319.2
TCGA-DV-A4VX-01A
59 years, male, black or african american, stage:Stage IV, dead, 1626 days
318.6
TCGA-BP-5009-01A
52 years, male, white, stage:Stage I, dead, 1092 days
317.5
TCGA-B0-5081-01A
79 years, female, white, stage:Stage III, dead, 362 days
314.8
TCGA-CJ-5676-01A
47 years, male, white, stage:Stage III, alive, 4067 days
313.5
TCGA-BP-5180-01A
53 years, male, white, stage:Stage I, alive, 2263 days
312.9
TCGA-6D-AA2E-01A
68 years, female, black or african american, stage:Stage I, alive, 362 days
310.8
TCGA-B8-4621-01A
63 years, male, black or african american, stage:Stage I, alive, 788 days
308.8
TCGA-BP-4327-01A
75 years, female, white, stage:Stage II, dead, 109 days
304.8
TCGA-B0-4818-01A
68 years, female, white, stage:Stage II, dead, 510 days
303.6
TCGA-B0-4821-01A
68 years, female, asian, stage:Stage III, dead, 1230 days
300.7
TCGA-CJ-4912-01A
61 years, male, white, stage:Stage II, alive, 1657 days
299.9
TCGA-B0-4817-01A
81 years, male, white, stage:Stage III, dead, 1019 days
298.3
TCGA-BP-5190-01A
61 years, male, white, stage:Stage I, alive, 1011 days
298.2
TCGA-B0-4707-01A
63 years, male, white, stage:Stage III, dead, 600 days
297.3
TCGA-CJ-4887-01A
48 years, male, white, stage:Stage IV, dead, 932 days
296.4
TCGA-B0-5083-01A
63 years, male, white, stage:Stage I, dead, 1045 days
295.4
TCGA-BP-4959-01A
49 years, male, white, stage:Stage I, alive, 2660 days
295.1
TCGA-BP-4337-01A
76 years, female, white, stage:Stage III, dead, 2 days
292.5
TCGA-MM-A84U-01A
58 years, female, black or african american, stage:Stage I, alive, 700 days
289.5
TCGA-B0-5400-01A
59 years, female, white, stage:Stage III, alive, 1733 days
288.1
TCGA-A3-3306-01A
67 years, male, white, stage:Stage I, alive, 1120 days
287.8
TCGA-AK-3434-01A
72 years, male, white, stage:Stage I, alive, 2087 days
284.9
TCGA-AK-3453-01A
58 years, female, white, stage:Stage II, alive, 2531 days
282.5
TCGA-A3-3374-01A
51 years, female, black or african american, stage:Stage I, alive, 1314 days
281.4
TCGA-AS-3777-01A
63 years, male, white, stage:Stage I, alive, 1238 days
279.0
TCGA-B4-5832-01A
65 years, male, white, stage:Stage III, alive, 155 days
266.5
TCGA-CJ-4891-01A
57 years, female, white, stage:Stage III, dead, 819 days
266.5
TCGA-BP-5000-01A
40 years, male, white, stage:Stage I, alive, 563 days
264.1
TCGA-BP-4962-01A
58 years, male, white, stage:Stage II, alive, 1785 days
263.4
TCGA-AK-3454-01A
84 years, male, white, stage:Stage I, alive, 874 days
263.1
TCGA-BP-4971-01A
40 years, male, white, stage:Stage III, alive, 1487 days
262.4
TCGA-CJ-4900-01A
69 years, female, white, stage:Stage IV, dead, 1714 days
257.7
TCGA-B8-A54D-01A
69 years, male, black or african american, stage:Stage III, alive, 830 days
254.5
TCGA-BP-4981-01A
75 years, female, white, stage:Stage III, dead, 1097 days
252.6
TCGA-B0-4843-01A
57 years, male, white, stage:Stage III, dead, 320 days
250.6
TCGA-BP-4776-01A
52 years, male, white, stage:Stage I, alive, 411 days
249.3
TCGA-B0-4714-01A
81 years, male, white, stage:Stage IV, dead, 99 days
245.9
TCGA-CJ-5679-01A
73 years, male, white, stage:Stage III, dead, 679 days
242.9
TCGA-CJ-4873-01A
85 years, female, white, stage:Stage III, alive, 1776 days
241.6
TCGA-A3-3313-01A
59 years, male, black or african american, stage:Stage I, dead, 735 days
238.2
TCGA-BP-4159-01A
70 years, male, white, stage:Stage I, dead, 2601 days
237.3
TCGA-BP-4761-01A
57 years, male, white, stage:Stage III, alive, 182 days
236.3
TCGA-B0-4811-01A
48 years, male, white, stage:Stage III, dead, 1417 days
233.4
TCGA-CZ-5987-01A
60 years, male, white, stage:Stage IV, dead, 445 days
232.3
TCGA-B0-4819-01A
60 years, female, white, stage:Stage IV, dead, 183 days
227.8
TCGA-BP-5001-01A
43 years, female, white, stage:Stage I, alive, 1177 days
220.7
TCGA-B0-4844-01A
60 years, male, white, stage:Stage IV, dead, 313 days
217.9
TCGA-BP-4167-01A
59 years, male, white, stage:Stage III, alive, 2718 days
214.6
TCGA-B0-4847-01A
60 years, male, white, stage:Stage IV, dead, 793 days
214.1
TCGA-B0-5702-01A
71 years, male, white, stage:Stage I, alive, 2172 days
207.6
TCGA-MM-A564-01A
68 years, male, black or african american, stage:Stage II, alive, 607 days
203.5
TCGA-B0-5117-01A
40 years, male, white, stage:Stage I, alive, 1608 days
201.6
TCGA-G6-A5PC-01A
54 years, female, black or african american, stage:Stage IV, dead, 242 days
197.9
TCGA-BP-5178-01A
71 years, male, white, stage:Stage IV, dead, 1912 days
197.2
TCGA-B0-4813-01A
68 years, male, white, stage:Stage III, dead, 18 days
186.3
TCGA-CJ-4875-01A
67 years, male, white, stage:Stage IV, dead, 3554 days
183.6
TCGA-BP-5010-01A
63 years, male, white, stage:Stage III, dead, 878 days
177.5
TCGA-BP-4334-01A
56 years, male, white, stage:Stage III, dead, 645 days
176.7
TCGA-AK-3458-01A
48 years, male, white, stage:Stage I, alive, 1168 days
175.4
TCGA-BP-4960-01A
46 years, male, white, stage:Stage II, alive, 2172 days
170.1
TCGA-B0-4822-01A
78 years, male, white, stage:Stage II, dead, 1111 days
162.1
TCGA-AK-3451-01A
48 years, male, white, stage:Stage II, alive, 2868 days
160.4
TCGA-BP-5175-01A
60 years, male, white, stage:Stage I, alive, 932 days
155.7
TCGA-B0-4841-01A
63 years, male, white, stage:Stage IV, dead, 204 days
145.3
TCGA-B0-5085-01A
76 years, female, white, stage:Stage III, dead, 770 days
139.5
TCGA-BP-5169-01A
70 years, male, white, stage:Stage I, alive, 193 days
138.5
TCGA-B0-4842-01A
73 years, female, white, stage:Stage III, dead, 1724 days
135.4
TCGA-AK-3426-01A
37 years, male, white, stage:Stage III, dead, 885 days
130.3
TCGA-B8-A54I-01A
48 years, male, black or african american, stage:Stage I, alive, 150 days
129.6
TCGA-BP-5191-01A
79 years, male, white, stage:Stage III, alive, 967 days
128.7
TCGA-B0-4697-01A
46 years, female, white, stage:Stage IV, dead, 578 days
125.6
TCGA-G6-A8L7-01A
81 years, female, black or african american, stage:Stage I, alive, 2133 days
125.5
TCGA-BP-5185-01A
56 years, male, white, stage:Stage I, alive, 1132 days
99.8
TCGA-AK-3447-01A
83 years, male, white, stage:Stage II, alive, 1217 days
85.6
TCGA-BP-4992-01A
66 years, male, white, stage:Stage I, alive, 501 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSP90AB1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
668.6
Number of samples
100
Samples
Sample
Description
pTPM
ccRCC-55
58 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1903.7
ccRCC-10
76 years, male, NA, stage:pT3aN2M1, dead, 90 days
1204.2
ccRCC-77
41 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1203.7
ccRCC-41
82 years, male, NA, stage:pT3bN0M0, dead, 540 days
1061.2
ccRCC-84
69 years, male, NA, stage:pT1bN0M0, alive, 2010 days
1057.1
ccRCC-71
72 years, male, NA, stage:pT1bN0M0, alive, 2160 days
1020.6
ccRCC-46
61 years, male, NA, stage:pT1bN0M0, alive, 990 days
982.1
ccRCC-97
40 years, male, NA, stage:pT1aN2M1, dead, 990 days
973.5
ccRCC-93
60 years, male, NA, stage:pT1bN0M0, alive, 3660 days
952.6
ccRCC-16
48 years, male, NA, stage:pT2N0M0, alive, 2190 days
947.1
ccRCC-90
72 years, male, NA, stage:pT1aN0M0, dead, 1170 days
946.8
ccRCC-21
70 years, male, NA, stage:pT1bN0M0, alive, 1080 days
937.6
ccRCC-15
65 years, female, NA, stage:pT2N0M0, dead, 2070 days
930.6
ccRCC-96
52 years, male, NA, stage:pT1aN0M0, alive, 3930 days
903.5
ccRCC-50
68 years, male, NA, stage:pT3bN0M0, alive, 900 days
899.5
ccRCC-44
56 years, female, NA, stage:pT1bN0M0, alive, 1050 days
899.1
ccRCC-11
76 years, male, NA, stage:pT1aN0M0, alive, 2370 days
880.8
ccRCC-62
78 years, male, NA, stage:pT1bN0M0, alive, 1620 days
871.7
ccRCC-79
35 years, male, NA, stage:pT1bN0M0, alive, 2670 days
858.1
ccRCC-19
39 years, female, NA, stage:pT2N0M0, alive, 2100 days
846.7
ccRCC-23
72 years, male, NA, stage:pT1bN0M0, alive, 1170 days
844.5
ccRCC-99
60 years, female, NA, stage:pT2N0M0, alive, 3330 days
835.8
ccRCC-61
56 years, male, NA, stage:pT1aN0M0, alive, 1470 days
817.5
ccRCC-38
60 years, male, NA, stage:pT1aN0M0, alive, 1380 days
775.8
ccRCC-18
56 years, female, NA, stage:pT1aN0M0, alive, 2130 days
766.3
ccRCC-88
64 years, male, NA, stage:pT1aN0M0, alive, 2880 days
761.5
ccRCC-29
73 years, female, NA, stage:pT1aN0M0, alive, 1710 days
749.8
ccRCC-27
56 years, male, NA, stage:pT1aN0M0, alive, 1590 days
736.6
ccRCC-20
56 years, female, NA, stage:pT3aN0M1, alive, 930 days
727.0
ccRCC-81
73 years, male, NA, stage:pT3aN2M0, dead, 1290 days
720.1
ccRCC-51
70 years, male, NA, stage:pT3aN0M0, alive, 1410 days
705.6
ccRCC-73
56 years, male, NA, stage:pT1aN0M0, alive, 2640 days
702.6
ccRCC-68
69 years, male, NA, stage:pT1bN0M0, alive, 2640 days
691.8
ccRCC-60
78 years, female, NA, stage:pT1aN0M0, alive, 1470 days
689.5
ccRCC-72
35 years, male, NA, stage:pT1bN0M0, alive, 2760 days
681.1
ccRCC-87
40 years, male, NA, stage:pT1bN0M0, alive, 2370 days
679.7
ccRCC-42
73 years, male, NA, stage:pT3aN0M0, alive, 1170 days
676.0
ccRCC-28
59 years, male, NA, stage:pT1bN0M0, alive, 1530 days
675.8
ccRCC-91
67 years, male, NA, stage:pT1aN0M0, dead, 1890 days
670.9
ccRCC-92
59 years, male, NA, stage:pT1aN0M0, alive, 3660 days
669.5
ccRCC-80
70 years, male, NA, stage:pT2N0M0, alive, 3000 days
668.9
ccRCC-95
59 years, male, NA, stage:pT1bN0M0, alive, 3960 days
668.4
ccRCC-98
54 years, male, NA, stage:pT1aN0M0, alive, 30 days
667.3
ccRCC-48
42 years, male, NA, stage:pT1bN0M0, alive, 990 days
663.3
ccRCC-31
75 years, male, NA, stage:pT1aN0M0, alive, 1560 days
662.4
ccRCC-106
58 years, male, NA, stage:pT1aN0M0, dead, 1890 days
659.6
ccRCC-6
75 years, male, NA, stage:pT1bN0M0, alive, 2820 days
659.1
ccRCC-103
55 years, female, NA, stage:pT1aN0M0, alive, 4350 days
649.0
ccRCC-102
53 years, male, NA, stage:pT1bN0M0, alive, 4260 days
646.0
ccRCC-66
73 years, female, NA, stage:pT3bN0M1, alive, 2520 days
643.0
ccRCC-35
67 years, male, NA, stage:pT1aN0M0, alive, 1380 days
632.6
ccRCC-89
59 years, male, NA, stage:pT1aN0M0, alive, 3510 days
631.9
ccRCC-34
65 years, male, NA, stage:pT3bN0M1, alive, 1530 days
623.6
ccRCC-100
65 years, male, NA, stage:pT1aN0M0, alive, 4260 days
621.9
ccRCC-64
58 years, male, NA, stage:pT3aN0M0, alive, 2430 days
621.7
ccRCC-75
58 years, male, NA, stage:pT3aN1M1, dead, 180 days
620.8
ccRCC-104
52 years, female, NA, stage:pT1aN0M0, alive, 3480 days
616.9
ccRCC-65
63 years, male, NA, stage:pT3bN0M1, dead, 300 days
613.6
ccRCC-45
61 years, male, NA, stage:pT1aN0M0, alive, 1020 days
611.2
ccRCC-14
58 years, male, NA, stage:pT3cN0M0, alive, 2280 days
610.7
ccRCC-105
59 years, male, NA, stage:pT1aN0M0, alive, 2190 days
607.8
ccRCC-67
59 years, male, NA, stage:pT1aN0M0, dead, 1260 days
607.7
ccRCC-9
75 years, male, NA, stage:pT2N1M1, dead, 360 days
603.2
ccRCC-59
56 years, male, NA, stage:pT1bN0M0, alive, 930 days
601.6
ccRCC-85
73 years, female, NA, stage:pT1bN0M0, alive, 3330 days
601.1
ccRCC-25
65 years, male, NA, stage:pT1aN0M0, alive, 1350 days
599.9
ccRCC-7
87 years, female, NA, stage:pT2N0M0, alive, 330 days
598.0
ccRCC-24
91 years, male, NA, stage:pT3bN0M0, dead, 750 days
581.4
ccRCC-82
53 years, male, NA, stage:pT1aN0M0, alive, 3090 days
574.5
ccRCC-17
54 years, female, NA, stage:pT1bN0M0, alive, 2220 days
571.9
ccRCC-52
66 years, female, NA, stage:pT3bN0M1, alive, 1350 days
569.6
ccRCC-86
74 years, female, NA, stage:pT1bN0M0, alive, 3390 days
552.1
ccRCC-30
64 years, male, NA, stage:pT2N0M0, dead, 420 days
545.9
ccRCC-5
77 years, male, NA, stage:pT1aN0M0, alive, 2940 days
545.7
ccRCC-69
80 years, male, NA, stage:pT1aN0M0, alive, 2670 days
542.1
ccRCC-83
72 years, male, NA, stage:pT1aN0M0, alive, 300 days
530.5
ccRCC-22
64 years, male, NA, stage:pT3bN0M0, dead, 330 days
529.0
ccRCC-58
62 years, male, NA, stage:pT1aN0M0, alive, 1110 days
521.9
ccRCC-4
82 years, male, NA, stage:pT1bN0M0, dead, 270 days
509.1
ccRCC-40
65 years, male, NA, stage:pT1aN0M0, alive, 1020 days
505.7
ccRCC-8
73 years, male, NA, stage:pT1bN0M0, alive, 2400 days
494.9
ccRCC-49
64 years, male, NA, stage:pT3bN0M0, alive, 1290 days
485.2
ccRCC-78
70 years, female, NA, stage:pT1aN0M0, alive, 2610 days
464.3
ccRCC-54
57 years, male, NA, stage:pT1bN0M0, alive, 1200 days
447.7
ccRCC-53
69 years, male, NA, stage:pT1aN0M0, alive, 1260 days
438.5
ccRCC-76
81 years, female, NA, stage:pT3aN0M1, dead, 960 days
428.2
ccRCC-70
70 years, male, NA, stage:pT4N0M1, dead, 540 days
421.7
ccRCC-32
55 years, male, NA, stage:pT2N0M0, dead, 1320 days
417.5
ccRCC-1
58 years, female, NA, stage:pT1bN0M0, alive, 3330 days
415.8
ccRCC-94
69 years, male, NA, stage:pT1bN0M0, dead, 480 days
415.7
ccRCC-3
71 years, male, NA, stage:pT3bN1M0, dead, 240 days
400.2
ccRCC-26
51 years, male, NA, stage:pT1bN0M0, alive, 1800 days
396.4
ccRCC-12
80 years, male, NA, stage:pT1aN0M0, alive, 900 days
391.1
ccRCC-39
73 years, male, NA, stage:pT2N0M0, alive, 900 days
390.2
ccRCC-2
71 years, male, NA, stage:pT1aN0M1, dead, 2190 days
368.4
ccRCC-13
44 years, female, NA, stage:pT3aN2M0, dead, 540 days
346.6
ccRCC-56
78 years, male, NA, stage:pT1aN0M0, alive, 1950 days
344.9
ccRCC-37
73 years, female, NA, stage:pT1aN0M0, alive, 1500 days
309.3
ccRCC-36
59 years, male, NA, stage:pT2N0M0, alive, 1410 days
300.6
ccRCC-43
55 years, female, NA, stage:pT1bN0M0, alive, 1050 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
HSP90AB1 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
557.2
Number of samples
282
Samples
Sample
Description
pTPM
TCGA-UZ-A9PQ-01A
59 years, male, black or african american, stage:Stage III, dead, 2624 days
10641.6
TCGA-BQ-7048-01A
64 years, male, white, stage:Stage III, alive, 2839 days
2241.7
TCGA-B9-A69E-01A
71 years, male, white, stage:Stage III, alive, 452 days
2132.1
TCGA-GL-7966-01A
28 years, female, white, stage:Stage III, alive, 112 days
1826.3
TCGA-A4-A5Y1-01A
75 years, male, white, stage:Stage III, dead, 395 days
1819.7
TCGA-Q2-A5QZ-01A
61 years, female, black or african american, stage:Stage III, alive, 428 days
1481.1
TCGA-BQ-5876-01A
75 years, male, white, stage:Stage I, alive, 586 days
1318.3
TCGA-BQ-7051-01A
74 years, male, white, stage:Stage II, alive, 1533 days
1183.4
TCGA-BQ-5879-01A
32 years, female, white, stage:Stage III, dead, 697 days
1181.5
TCGA-2Z-A9J9-01A
77 years, male, black or african american, stage:Stage I, alive, 2294 days
1164.6
TCGA-AL-3467-01A
54 years, female, white, stage:'--, alive, 2135 days
1148.9
TCGA-4A-A93X-01A
58 years, male, white, stage:Stage IV, alive, 390 days
1120.1
TCGA-J7-8537-01A
37 years, female, asian, stage:Stage III, dead, 321 days
1092.6
TCGA-F9-A4JJ-01A
35 years, female, black or african american, stage:Stage III, dead, 325 days
1058.1
TCGA-BQ-5877-01A
60 years, male, black or african american, stage:Stage IV, dead, 270 days
1046.9
TCGA-A4-7997-01A
67 years, male, white, stage:Stage I, alive, 927 days
1035.1
TCGA-IA-A40Y-01A
60 years, female, white, stage:Stage III, alive, 62 days
1033.7
TCGA-A4-7287-01A
75 years, female, white, stage:Stage I, dead, 597 days
1027.7
TCGA-A4-7915-01A
35 years, female, black or african american, stage:Stage II, alive, 7 days
1011.1
TCGA-DZ-6131-01A
31 years, male, white, stage:Stage III, alive, 2429 days
1007.1
TCGA-BQ-5894-01A
42 years, male, stage:Stage IV, alive, 84 days
997.6
TCGA-G7-A8LD-01A
71 years, male, white, stage:Stage III, dead, 514 days
967.8
TCGA-BQ-5891-01A
57 years, female, white, stage:Stage III, alive, 29 days
940.3
TCGA-F9-A8NY-01A
38 years, female, asian, stage:Stage IV, alive, 36 days
933.7
TCGA-BQ-5878-01A
79 years, female, white, stage:Stage III, alive, 1938 days
895.9
TCGA-F9-A97G-01A
79 years, male, asian, stage:Stage III, alive, 13 days
864.7
TCGA-P4-AAVO-01A
69 years, male, white, stage:Stage I, alive, 2400 days
850.4
TCGA-BQ-5893-01A
61 years, male, white, stage:Stage IV, dead, 241 days
846.2
TCGA-B3-4104-01A
75 years, male, white, stage:Stage II, alive, 1049 days
828.0
TCGA-BQ-7044-01A
73 years, male, white, stage:Stage III, alive, 3760 days
815.7
TCGA-UZ-A9PN-01A
54 years, male, white, stage:Stage III, dead, 1136 days
814.6
TCGA-A4-8098-01A
73 years, male, black or african american, stage:Stage I, alive, 896 days
813.6
TCGA-2Z-A9JJ-01A
69 years, female, white, stage:Stage I, alive, 1213 days
785.1
TCGA-G7-6789-01A
53 years, female, white, stage:Stage IV, dead, 122 days
769.2
TCGA-BQ-5887-01A
54 years, male, white, stage:Stage III, alive, 771 days
757.5
TCGA-B1-7332-01A
60 years, female, black or african american, stage:Stage II, alive, 1141 days
754.4
TCGA-SX-A7SQ-01A
48 years, male, white, stage:Stage I, alive, 1266 days
753.7
TCGA-G7-6793-01A
60 years, female, white, stage:Stage IV, dead, 336 days
752.8
TCGA-G7-7501-01A
55 years, female, black or african american, stage:Stage III, dead, 624 days
743.4
TCGA-5P-A9KC-01A
51 years, female, white, stage:'--, alive, 377 days
738.2
TCGA-B9-A5W9-01A
40 years, male, white, stage:Stage I, alive, 5 days
737.8
TCGA-2Z-A9JS-01A
74 years, male, white, stage:Stage I, dead, 492 days
733.9
TCGA-GL-A9DC-01A
66 years, female, white, stage:Stage I, alive, 392 days
732.6
TCGA-SX-A7SM-01A
60 years, male, black or african american, stage:Stage IV, dead, 363 days
725.3
TCGA-B9-4116-01A
75 years, female, black or african american, stage:'--, alive, 627 days
714.3
TCGA-IZ-8196-01A
50 years, male, white, stage:Stage I, alive, 649 days
713.7
TCGA-UZ-A9PP-01A
60 years, male, white, stage:Stage I, alive, 3010 days
701.6
TCGA-EV-5903-01A
57 years, male, white, stage:Stage I, alive, 757 days
701.2
TCGA-B9-5155-01A
71 years, male, white, stage:Stage III, alive, 665 days
695.6
TCGA-A4-8310-01A
58 years, male, white, stage:Stage III, alive, 780 days
692.9
TCGA-Y8-A894-01A
57 years, female, white, stage:Stage I, alive, 567 days
688.6
TCGA-B3-3925-01A
52 years, male, white, stage:Stage III, alive, 1029 days
685.1
TCGA-EV-5901-01A
47 years, female, white, stage:Stage I, alive, 1040 days
681.6
TCGA-A4-7583-01A
60 years, male, black or african american, stage:Stage I, alive, 3 days
681.5
TCGA-BQ-5882-01A
54 years, male, stage:Stage III, dead, 658 days
681.2
TCGA-BQ-7061-01A
83 years, female, white, stage:Stage I, alive, 218 days
671.6
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
660.6
TCGA-BQ-5890-01A
69 years, male, white, stage:Stage III, alive, 233 days
657.9
TCGA-GL-7773-01A
63 years, male, white, stage:Stage I, alive, 393 days
653.6
TCGA-DZ-6132-01A
69 years, male, stage:Stage I, alive, 2460 days
652.1
TCGA-2Z-A9JG-01A
64 years, male, white, stage:Stage I, alive, 1662 days
645.6
TCGA-5P-A9K9-01A
59 years, female, white, stage:'--, dead, 589 days
634.4
TCGA-UZ-A9PR-01A
84 years, male, white, stage:Stage I, alive, 2191 days
624.2
TCGA-UZ-A9PS-01A
62 years, female, black or african american, stage:Stage II, alive, 2167 days
621.7
TCGA-B3-3926-01A
59 years, female, white, stage:Stage I, alive, 883 days
617.0
TCGA-A4-7288-01A
71 years, female, white, stage:'--, alive, 1857 days
616.6
TCGA-AL-7173-01A
72 years, female, white, stage:Stage IV, alive, 2060 days
616.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
610.5
TCGA-2Z-A9J8-01A
50 years, male, white, stage:Stage I, alive, 2790 days
608.5
TCGA-MH-A561-01A
66 years, male, white, stage:Stage I, alive, 841 days
606.5
TCGA-AL-A5DJ-01A
54 years, female, white, stage:Stage III, dead, 1498 days
606.4
TCGA-G7-A8LE-01A
62 years, male, white, stage:Stage I, alive, 2453 days
605.3
TCGA-DW-7839-01A
58 years, female, white, stage:Stage I, alive, 419 days
599.3
TCGA-HE-A5NH-01A
62 years, male, stage:Stage I, alive, 791 days
595.4
TCGA-P4-A5EB-01A
83 years, male, white, stage:Stage I, alive, 2477 days
595.1
TCGA-B3-8121-01A
48 years, female, black or african american, stage:Stage I, alive, 379 days
588.9
TCGA-B9-5156-01A
51 years, male, white, stage:'--, alive, 1338 days
588.7
TCGA-DW-7836-01A
55 years, male, white, stage:Stage I, alive, 1093 days
588.4
TCGA-2Z-A9JR-01A
57 years, male, white, stage:Stage I, alive, 161 days
586.3
TCGA-BQ-5892-01A
51 years, male, white, stage:Stage I, alive, 364 days
585.6
TCGA-BQ-5875-01A
66 years, female, white, stage:Stage III, alive, 2639 days
584.1
TCGA-PJ-A5Z8-01A
60 years, female, white, stage:Stage I, alive, 600 days
582.5
TCGA-DW-7842-01A
52 years, male, white, stage:Stage I, alive, 92 days
578.5
TCGA-SX-A71S-01A
66 years, female, white, stage:Stage I, alive, 1504 days
570.6
TCGA-P4-A5E7-01A
74 years, female, white, stage:Stage I, alive, 2649 days
568.4
TCGA-B9-A5W8-01A
50 years, male, black or african american, stage:Stage II, alive, 524 days
566.6
TCGA-UN-AAZ9-01A
76 years, female, black or african american, stage:Stage I, alive, 548 days
564.3
TCGA-GL-8500-01A
63 years, male, white, stage:Stage I, alive, 841 days
560.6
TCGA-UZ-A9PJ-01A
78 years, male, white, stage:Stage I, dead, 797 days
554.2
TCGA-A4-A5Y0-01A
61 years, female, white, stage:Stage I, alive, 252 days
551.6
TCGA-DW-7834-01A
53 years, male, white, stage:Stage I, alive, 3950 days
551.4
TCGA-GL-A59R-01A
79 years, male, white, stage:Stage III, alive, 378 days
551.1
TCGA-Y8-A897-01A
68 years, female, white, stage:Stage I, alive, 549 days
549.5
TCGA-DZ-6133-01A
66 years, female, white, stage:Stage I, dead, 1557 days
549.2
TCGA-DW-7838-01A
66 years, male, white, stage:Stage I, alive, 744 days
543.6
TCGA-UZ-A9PU-01A
77 years, male, white, stage:Stage I, dead, 933 days
542.4
TCGA-A4-7828-01A
74 years, female, black or african american, stage:Stage I, alive, 238 days
541.2
TCGA-MH-A854-01A
62 years, female, black or african american, stage:Stage I, alive, 536 days
540.9
TCGA-AT-A5NU-01A
77 years, male, white, stage:Stage I, alive, 67 days
540.3
TCGA-A4-7585-01A
67 years, male, white, stage:Stage III, dead, 1070 days
539.1
TCGA-Y8-A8S0-01A
58 years, male, white, stage:Stage I, alive, 183 days
538.2
TCGA-GL-A9DE-01A
74 years, male, black or african american, stage:Stage I, alive, 496 days
535.0
TCGA-AL-3466-01A
41 years, male, white, stage:Stage IV, dead, 293 days
534.1
TCGA-BQ-7062-01A
64 years, male, black or african american, stage:Stage I, alive, 116 days
531.7
TCGA-A4-8312-01A
60 years, male, black or african american, stage:Stage I, alive, 708 days
529.7
TCGA-BQ-7046-01A
61 years, male, white, stage:Stage I, alive, 2948 days
525.1
TCGA-A4-7734-01A
53 years, female, white, stage:Stage I, alive, 27 days
524.4
TCGA-G7-6792-01A
40 years, male, black or african american, stage:Stage I, alive, 2765 days
522.8
TCGA-SX-A7SN-01A
52 years, male, white, stage:Stage I, alive, 578 days
522.1
TCGA-A4-A5XZ-01A
65 years, female, white, stage:Stage II, alive, 479 days
521.2
TCGA-2Z-A9J7-01A
63 years, male, white, stage:Stage IV, dead, 139 days
517.6
TCGA-2Z-A9J3-01A
67 years, male, white, stage:Stage II, dead, 1771 days
517.5
TCGA-5P-A9K4-01A
54 years, male, white, stage:'--, alive, 2184 days
516.9
TCGA-Y8-A8RZ-01A
55 years, male, white, stage:Stage I, alive, 205 days
514.4
TCGA-SX-A71W-01A
66 years, male, white, stage:Stage I, alive, 1076 days
512.0
TCGA-5P-A9K0-01A
75 years, male, white, stage:'--, alive, 677 days
510.7
TCGA-Y8-A898-01A
69 years, male, white, stage:Stage I, alive, 475 days
510.6
TCGA-5P-A9K3-01A
59 years, male, white, stage:'--, dead, 471 days
509.9
TCGA-2Z-A9JI-01A
38 years, male, white, stage:Stage III, alive, 1567 days
505.2
TCGA-SX-A71U-01A
57 years, male, white, stage:Stage I, alive, 1357 days
504.0
TCGA-2Z-A9JN-01A
50 years, female, black or african american, stage:Stage I, alive, 740 days
503.8
TCGA-P4-AAVK-01A
74 years, male, white, stage:Stage III, alive, 1590 days
499.4
TCGA-IA-A83V-01A
63 years, male, white, stage:Stage I, dead, 2941 days
493.6
TCGA-BQ-7059-01A
71 years, male, white, stage:Stage I, alive, 232 days
493.2
TCGA-A4-8516-01A
62 years, male, white, stage:Stage III, alive, 23 days
491.9
TCGA-DZ-6135-01A
45 years, male, stage:Stage I, alive, 2269 days
489.4
TCGA-HE-A5NJ-01A
58 years, male, stage:'--, alive, 1726 days
487.1
TCGA-BQ-7049-01A
45 years, female, white, stage:Stage I, dead, 1364 days
486.6
TCGA-J7-6720-01A
42 years, male, asian, stage:Stage I, alive, 388 days
484.3
TCGA-B1-5398-01A
73 years, male, white, stage:Stage III, alive, 1251 days
481.9
TCGA-B1-A657-01A
54 years, male, white, stage:Stage I, alive, 641 days
481.8
TCGA-A4-8630-01A
59 years, female, white, stage:Stage I, alive, 436 days
480.1
TCGA-2K-A9WE-01A
53 years, male, white, stage:Stage II, alive, 214 days
474.4
TCGA-BQ-5884-01A
59 years, female, black or african american, stage:Stage I, alive, 792 days
473.9
TCGA-2Z-A9JM-01A
28 years, male, white, stage:Stage I, alive, 934 days
469.0
TCGA-IA-A40U-01A
56 years, male, white, stage:Stage III, alive, 511 days
467.3
TCGA-IA-A83W-01A
70 years, male, white, stage:Stage I, dead, 2043 days
466.3
TCGA-HE-A5NK-01A
82 years, male, stage:'--, alive, 2228 days
465.5
TCGA-A4-A4ZT-01A
71 years, female, white, stage:Stage I, alive, 516 days
462.5
TCGA-UZ-A9PO-01A
80 years, male, white, stage:Stage I, alive, 1911 days
460.7
TCGA-SX-A7SP-01A
66 years, female, white, stage:Stage I, dead, 496 days
459.4
TCGA-BQ-5883-01A
79 years, female, black or african american, stage:Stage I, alive, 1242 days
456.7
TCGA-B1-A47M-01A
79 years, male, black or african american, stage:Stage III, alive, 659 days
455.6
TCGA-O9-A75Z-01A
44 years, male, white, stage:Stage I, alive, 471 days
452.9
TCGA-5P-A9JZ-01A
51 years, female, white, stage:'--, alive, 2744 days
449.3
TCGA-A4-8518-01A
48 years, male, white, stage:Stage I, alive, 600 days
448.8
TCGA-5P-A9JV-01A
49 years, male, white, stage:'--, alive, 2043 days
444.7
TCGA-HE-A5NF-01A
58 years, male, stage:Stage I, alive, 2582 days
444.5
TCGA-SX-A71V-01A
80 years, male, white, stage:Stage I, alive, 876 days
441.3
TCGA-PJ-A5Z9-01A
80 years, female, white, stage:Stage I, alive, 540 days
441.2
TCGA-4A-A93W-01A
66 years, female, white, stage:Stage I, alive, 4 days
441.2
TCGA-A4-A57E-01A
59 years, male, white, stage:Stage IV, dead, 258 days
440.9
TCGA-B9-A8YI-01A
79 years, male, black or african american, stage:Stage I, alive, 374 days
435.8
TCGA-B9-A8YH-01A
52 years, male, black or african american, stage:Stage I, alive, 532 days
434.2
TCGA-2Z-A9JE-01A
59 years, male, white, stage:Stage I, alive, 1728 days
433.3
TCGA-BQ-5885-01A
63 years, male, white, stage:Stage III, alive, 921 days
433.0
TCGA-UZ-A9PK-01A
71 years, male, white, stage:Stage I, alive, 3571 days
432.1
TCGA-B9-4113-01A
64 years, male, black or african american, stage:Stage I, dead, 1536 days
430.4
TCGA-SX-A7SO-01A
64 years, male, white, stage:Stage I, alive, 1257 days
427.4
TCGA-5P-A9KA-01A
61 years, male, white, stage:'--, alive, 395 days
426.0
TCGA-BQ-7045-01A
78 years, male, black or african american, stage:Stage I, dead, 1468 days
424.2
TCGA-BQ-7055-01A
73 years, male, white, stage:Stage I, alive, 799 days
423.4
TCGA-GL-A59T-01A
46 years, male, white, stage:Stage I, alive, 546 days
422.5
TCGA-P4-AAVL-01A
85 years, male, white, stage:Stage III, dead, 487 days
422.4
TCGA-MH-A55W-01A
50 years, male, black or african american, stage:Stage I, alive, 1043 days
422.3
TCGA-5P-A9JW-01A
64 years, male, white, stage:'--, alive, 3241 days
417.9
TCGA-5P-A9K8-01A
51 years, female, white, stage:'--, alive, 1309 days
417.0
TCGA-DW-7837-01A
43 years, male, black or african american, stage:Stage I, alive, 1142 days
416.1
TCGA-SX-A7SR-01A
66 years, male, white, stage:Stage II, alive, 805 days
415.5
TCGA-KV-A6GD-01A
85 years, male, white, stage:Stage I, alive, 560 days
413.9
TCGA-IA-A83S-01A
81 years, male, white, stage:'--, dead, 2609 days
413.9
TCGA-MH-A857-01A
63 years, male, black or african american, stage:Stage I, alive, 890 days
413.7
TCGA-A4-8515-01A
47 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
413.2
TCGA-GL-6846-01A
52 years, male, white, stage:Stage IV, alive, 5925 days
406.9
TCGA-A4-7584-01A
59 years, male, black or african american, stage:Stage I, alive, 650 days
404.9
TCGA-P4-A5EA-01A
54 years, female, white, stage:Stage III, dead, 201 days
404.6
TCGA-A4-8311-01A
60 years, male, white, stage:Stage I, alive, 729 days
403.8
TCGA-A4-8517-01A
71 years, male, white, stage:Stage I, alive, 597 days
402.9
TCGA-P4-AAVM-01A
69 years, male, white, stage:Stage I, alive, 1539 days
399.8
TCGA-IZ-A6M8-01A
69 years, male, black or african american, stage:Stage I, alive, 497 days
399.3
TCGA-2Z-A9J6-01A
60 years, male, white, stage:Stage I, alive, 1731 days
398.3
TCGA-A4-7286-01A
42 years, male, white, stage:'--, alive, 554 days
397.4
TCGA-UZ-A9Q1-01A
88 years, female, white, stage:Stage I, alive, 730 days
396.3
TCGA-2Z-A9JD-01A
66 years, male, white, stage:Stage I, alive, 1060 days
393.8
TCGA-2Z-A9JK-01A
50 years, male, white, stage:Stage III, alive, 1186 days
392.7
TCGA-5P-A9KH-01A
77 years, male, white, stage:'--, alive, 2051 days
392.6
TCGA-UZ-A9PX-01A
73 years, male, white, stage:Stage I, alive, 1981 days
392.5
TCGA-BQ-5888-01A
74 years, female, white, stage:Stage I, alive, 403 days
391.5
TCGA-F9-A7Q0-01A
37 years, female, asian, stage:Stage I, alive, 398 days
391.1
TCGA-AL-3468-01A
74 years, male, white, stage:Stage II, dead, 2331 days
389.1
TCGA-B9-A5W7-01A
47 years, male, black or african american, stage:Stage I, alive, 585 days
386.6
TCGA-B3-A6W5-01A
43 years, male, black or african american, stage:Stage I, alive, 309 days
385.2
TCGA-UZ-A9PL-01A
59 years, male, white, stage:Stage II, alive, 3152 days
385.0
TCGA-EV-5902-01A
58 years, male, white, stage:Stage I, alive, 578 days
384.5
TCGA-5P-A9K6-01A
64 years, male, white, stage:'--, alive, 1914 days
383.6
TCGA-IA-A83T-01A
80 years, male, white, stage:'--, dead, 2684 days
383.3
TCGA-UZ-A9PZ-01A
65 years, male, white, stage:Stage III, alive, 657 days
382.0
TCGA-DW-5561-01A
51 years, male, black or african american, stage:Stage I, alive, 414 days
380.7
TCGA-2Z-A9JL-01A
47 years, male, black or african american, stage:Stage I, alive, 1006 days
379.6
TCGA-B1-A655-01A
77 years, female, white, stage:Stage I, alive, 510 days
375.4
TCGA-G7-6797-01A
46 years, male, white, stage:Stage III, alive, 765 days
366.3
TCGA-BQ-7050-01A
53 years, female, white, stage:Stage I, alive, 1864 days
365.6
TCGA-BQ-7060-01A
53 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
365.0
TCGA-B9-4117-01A
48 years, female, black or african american, stage:'--, alive, 14 days
363.3
TCGA-BQ-7053-01A
57 years, female, black or african american, stage:Stage III, alive, 1516 days
357.9
TCGA-GL-A9DD-01A
69 years, male, white, stage:Stage I, alive, 341 days
356.3
TCGA-BQ-5889-01A
63 years, male, white, stage:Stage IV, dead, 329 days
355.6
TCGA-4A-A93Y-01A
63 years, female, black or african american, stage:Stage II, alive, 352 days
354.8
TCGA-2Z-A9JP-01A
63 years, male, white, stage:Stage I, alive, 893 days
354.7
TCGA-B9-A44B-01A
70 years, male, black or african american, stage:Stage III, alive, 361 days
354.3
TCGA-GL-A4EM-01A
61 years, male, white, stage:Stage I, alive, 32 days
354.2
TCGA-DW-7840-01A
60 years, male, black or african american, stage:Stage I, alive, 114 days
351.5
TCGA-A4-7732-01A
55 years, male, black or african american, stage:'--, alive, 582 days
350.8
TCGA-P4-A5E8-01A
57 years, male, white, stage:Stage III, dead, 1306 days
350.3
TCGA-A4-A6HP-01A
66 years, male, white, stage:Stage I, alive, 379 days
348.2
TCGA-KV-A74V-01A
40 years, male, white, stage:Stage I, alive, 347 days
348.1
TCGA-2Z-A9J1-01A
71 years, male, white, stage:Stage I, alive, 2298 days
347.8
TCGA-IZ-8195-01A
82 years, male, white, stage:Stage II, alive, 677 days
347.7
TCGA-2Z-A9JO-01A
56 years, female, black or african american, stage:Stage I, alive, 949 days
346.7
TCGA-V9-A7HT-01A
67 years, male, black or african american, stage:Stage II, alive, 965 days
346.2
TCGA-G7-6796-01A
58 years, male, white, stage:Stage I, alive, 2173 days
343.5
TCGA-DW-7841-01A
61 years, male, black or african american, stage:Stage I, alive, 445 days
343.3
TCGA-UZ-A9PV-01A
65 years, male, white, stage:Stage I, alive, 1444 days
342.4
TCGA-B9-4115-01A
53 years, male, black or african american, stage:Stage I, alive, 803 days
341.5
TCGA-5P-A9KF-01A
53 years, male, white, stage:'--, alive, 845 days
332.4
TCGA-Y8-A8RY-01A
63 years, male, white, stage:Stage I, alive, 769 days
330.9
TCGA-B1-A654-01A
43 years, female, black or african american, stage:Stage I, alive, 616 days
329.2
TCGA-2Z-A9J5-01A
80 years, male, white, stage:Stage II, alive, 3050 days
329.0
TCGA-BQ-5880-01A
79 years, male, white, stage:Stage III, dead, 1314 days
326.5
TCGA-Y8-A895-01A
74 years, male, white, stage:Stage I, alive, 484 days
325.7
TCGA-F9-A7VF-01A
75 years, female, white, stage:Stage I, alive, 73 days
323.7
TCGA-G7-A4TM-01A
40 years, male, black or african american, stage:Stage I, alive, 768 days
321.6
TCGA-UZ-A9PM-01A
62 years, male, white, stage:Stage II, alive, 3811 days
316.6
TCGA-SX-A7SU-01A
47 years, male, stage:Stage I, alive, 1331 days
316.3
TCGA-IZ-A6M9-01A
63 years, male, white, stage:Stage I, alive, 376 days
313.9
TCGA-P4-A5E6-01A
67 years, male, black or african american, stage:Stage III, alive, 3035 days
312.4
TCGA-KV-A6GE-01A
65 years, male, white, stage:Stage I, alive, 885 days
310.5
TCGA-5P-A9JY-01A
79 years, male, white, stage:'--, dead, 1508 days
307.3
TCGA-DZ-6134-01A
69 years, male, white, stage:Stage I, alive, 1856 days
303.8
TCGA-2Z-A9J2-01A
71 years, female, white, stage:Stage I, alive, 1795 days
299.1
TCGA-5P-A9KE-01A
70 years, male, white, stage:'--, alive, 824 days
296.7
TCGA-IA-A40X-01A
49 years, female, black or african american, stage:Stage I, alive, 608 days
296.0
TCGA-MH-A856-01A
54 years, male, white, stage:Stage I, alive, 947 days
295.5
TCGA-B1-A47O-01A
54 years, female, white, stage:Stage I, alive, 842 days
293.9
TCGA-Y8-A8S1-01A
61 years, male, white, stage:Stage I, alive, 404 days
292.0
TCGA-MH-A55Z-01A
65 years, male, black or african american, stage:Stage I, alive, 845 days
290.6
TCGA-B9-4114-01A
49 years, male, black or african american, stage:'--, alive, 857 days
289.4
TCGA-B1-A656-01A
64 years, male, white, stage:Stage I, alive, 618 days
287.1
TCGA-MH-A855-01A
52 years, female, black or african american, stage:Stage II, alive, 369 days
282.7
TCGA-Y8-A896-01A
62 years, male, white, stage:Stage III, alive, 567 days
272.1
TCGA-DW-5560-01A
38 years, female, white, stage:Stage I, alive, 1486 days
271.2
TCGA-2Z-A9JQ-01A
66 years, male, white, stage:Stage I, alive, 778 days
270.5
TCGA-B3-4103-01A
56 years, male, white, stage:Stage I, alive, 930 days
267.3
TCGA-AL-3473-01A
55 years, male, white, stage:Stage II, alive, 1906 days
266.8
TCGA-HE-A5NL-01A
51 years, male, stage:Stage I, alive, 767 days
266.6
TCGA-A4-A5DU-01A
45 years, female, white, stage:Stage I, alive, 496 days
256.8
TCGA-A4-A48D-01A
84 years, male, black or african american, stage:Stage I, alive, 379 days
246.4
TCGA-5P-A9JU-01A
81 years, male, white, stage:Stage III, alive, 373 days
245.3
TCGA-AL-3472-01A
57 years, male, black or african american, stage:'--, alive, 2029 days
244.8
TCGA-AL-3471-01A
74 years, male, white, stage:Stage I, dead, 1500 days
240.7
TCGA-B9-4617-01A
41 years, male, black or african american, stage:'--, alive, 35 days
236.3
TCGA-MH-A562-01A
57 years, male, black or african american, stage:Stage I, alive, 616 days
233.0
TCGA-J7-A8I2-01A
75 years, male, asian, stage:Stage I, alive, 307 days
232.0
TCGA-SX-A7SL-01A
74 years, male, stage:Stage I, alive, 823 days
226.0
TCGA-BQ-7058-01A
81 years, male, white, stage:Stage III, dead, 343 days
223.3
TCGA-HE-A5NI-01A
73 years, male, stage:Stage I, alive, 360 days
215.8
TCGA-BQ-7056-01A
75 years, female, white, stage:Stage III, alive, 612 days
210.9
TCGA-SX-A71R-01A
51 years, male, white, stage:Stage I, alive, 1457 days
201.9
TCGA-BQ-5881-01A
69 years, male, white, stage:Stage I, alive, 1454 days
195.0
TCGA-G7-A8LC-01A
61 years, male, white, stage:Stage I, alive, 702 days
185.1
TCGA-SX-A7SS-01A
67 years, male, white, stage:Stage I, alive, 1615 days
185.0
TCGA-WN-A9G9-01A
55 years, male, white, stage:Stage I, alive, 791 days
172.3
TCGA-P4-A5ED-01A
51 years, male, white, stage:Stage I, alive, 2816 days
170.5
TCGA-G7-6795-01A
56 years, male, white, stage:Stage I, alive, 1194 days
165.2
TCGA-2Z-A9JT-01A
71 years, male, white, stage:Stage I, alive, 684 days
160.2
TCGA-BQ-5886-01A
75 years, male, white, stage:Stage III, alive, 792 days
155.8
TCGA-MH-A560-01A
62 years, male, white, stage:Stage I, alive, 924 days
151.9
TCGA-B1-A47N-01A
62 years, male, white, stage:Stage I, alive, 1110 days
151.7
TCGA-WN-AB4C-01A
60 years, female, white, stage:Stage I, alive, 1188 days
123.7
TCGA-5P-A9K2-01A
62 years, male, white, stage:'--, alive, 2392 days
122.4
TCGA-G7-A8LB-01A
70 years, male, white, stage:Stage IV, alive, 547 days
118.3
TCGA-UZ-A9Q0-01A
60 years, male, white, stage:Stage I, alive, 3368 days
87.2
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0076330003
Tumor
0.8
CPT0017850003
Tumor
0.7
CPT0081880003
Tumor
0.6
CPT0023350003
Tumor
0.6
CPT0079410003
Tumor
0.5
CPT0001340003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0084560003
Tumor
0.5
CPT0075130003
Tumor
0.5
CPT0001260009
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0017410003
Tumor
0.3
CPT0079230003
Tumor
0.3
CPT0012180003
Tumor
0.3
CPT0063630003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0011410003
Tumor
0.3
CPT0086820003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0079180003
Tumor
0.3
CPT0015730003
Tumor
0.3
CPT0078800003
Tumor
0.3
CPT0076350001
Normal
0.2
CPT0001180009
Tumor
0.2
CPT0002270011
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0092740003
Normal
0.2
CPT0001500009
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0075170001
Normal
0.2
CPT0077320001
Normal
0.2
CPT0065430003
Tumor
0.2
CPT0020120003
Tumor
0.2
CPT0026410003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0025230003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0092160003
Tumor
0.1
CPT0065750003
Tumor
0.1
CPT0007320003
Tumor
0.1
CPT0025060001
Normal
0.1
CPT0025880003
Tumor
0.1
CPT0025580004
Tumor
0.1
CPT0065930003
Tumor
0.1
CPT0001350001
Normal
0.1
CPT0086360003
Tumor
0.1
CPT0019990003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0017450001
Normal
0.1
CPT0014450004
Tumor
0.1
CPT0079480003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0088480003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0075560003
Tumor
0.1
CPT0066430001
Normal
0.1
CPT0001540009
Tumor
0.0
CPT0066470004
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0000640003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0012370003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0023360001
Normal
0.0
CPT0092290003
Tumor
0.0
CPT0026420001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0013790003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0012090003
Normal
0.0
CPT0025170003
Tumor
0.0
CPT0092790003
Tumor
0.0
CPT0010160003
Tumor
0.0
CPT0087050003
Normal
0.0
CPT0081600003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0025110003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0063330001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0012570003
Normal
0.0
CPT0007860003
Tumor
0.0
CPT0012770003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0065450001
Normal
0.0
CPT0069000003
Tumor
0.0
CPT0085670003
Tumor
0.0
CPT0014470001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0088970003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0025290003
Tumor
0.0
CPT0002350011
Tumor
0.0
CPT0025610001
Normal
0.0
CPT0089480003
Normal
0.0
CPT0009060003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0023710001
Normal
0.0
CPT0012290003
Normal
0.0
CPT0086030003
Tumor
-0.1
CPT0063640001
Normal
-0.1
CPT0010170001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0009000003
Tumor
-0.1
CPT0066480003
Tumor
-0.1
CPT0069010001
Normal
-0.1
CPT0001270001
Normal
-0.1
CPT0088780001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0078990003
Tumor
-0.1
CPT0006730001
Normal
-0.1
CPT0000890001
Normal
-0.1
CPT0064400001
Normal
-0.1
CPT0065690003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0024680001
Normal
-0.1
CPT0089460004
Tumor
-0.1
CPT0092730003
Tumor
-0.1
CPT0020020001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0012920003
Normal
-0.1
CPT0092800003
Normal
-0.1
CPT0007470001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0065820001
Normal
-0.1
CPT0082010001
Normal
-0.1
CPT0087040003
Tumor
-0.1
CPT0012900004
Tumor
-0.1
CPT0009080003
Normal
-0.1
CPT0089040001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0006900003
Tumor
-0.1
CPT0063320003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0079270003
Tumor
-0.1
CPT0019160001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0014350001
Normal
-0.1
CPT0086870003
Tumor
-0.1
CPT0081620001
Normal
-0.1
CPT0078840001
Normal
-0.1
CPT0000790001
Normal
-0.1
CPT0020130001
Normal
-0.1
CPT0006950001
Normal
-0.1
CPT0010120001
Normal
-0.1
CPT0000780007
Tumor
-0.1
CPT0000660001
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0079510001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0001550001
Normal
-0.1
CPT0088710001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0065870003
Tumor
-0.1
CPT0077140001
Normal
-0.2
CPT0078670001
Normal
-0.2
CPT0089020003
Tumor
-0.2
CPT0075720003
Tumor
-0.2
CPT0006630003
Tumor
-0.2
CPT0078940001
Normal
-0.2
CPT0088550004
Tumor
-0.2
CPT0078660003
Tumor
-0.2
CPT0015910003
Tumor
-0.2
CPT0007870001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0001510001
Normal
-0.2
CPT0025350003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0079000001
Normal
-0.2
CPT0086950003
Tumor
-0.2
CPT0012640003
Normal
-0.2
CPT0088640003
Normal
-0.2
CPT0009020003
Normal
-0.2
CPT0079300001
Normal
-0.2
CPT0088570001
Normal
-0.2
CPT0006440003
Tumor
-0.2
CPT0001230001
Normal
-0.2
CPT0002370001
Normal
-0.2
CPT0088900003
Tumor
-0.2
CPT0025920001
Normal
-0.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
