HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:71.8 nTPM
HPA Brain:38.6 nTPM
GTEx:71.8 nTPM
FANTOM5:333.8 Scaled Tags Per Million
Pig:70.8 nTPM
Mouse:21.9 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 38.6
Sample id Sample description nTPM
Hippocampus
nTPM: 38.6
2529 Female, age 94, left hemisphere 41.9
1898 Male, age 80, left hemisphere 41.5
1911 Female, age 85, right hemisphere 39.9
1855 Male, age 76, left hemisphere 37.9
2621 Female, age 67, right hemisphere 36.7
2148 Female, age 91, left hemisphere 33.7
Dentate gyrus
nTPM: 37.2
2530 Female, age 94, left hemisphere 49.2
2010 Male, age 76, both hemispheres 44.9
2246 Female, age 85, both hemispheres 35.3
2531 Female, age 67, both hemispheres 31.8
1927 Female, age 91, both hemispheres 31.6
2528 Male, age 74, both hemispheres 30.3
Entorhinal gyrus
nTPM: 36.8
2686 Male, age 75, right hemisphere 50.0
2117 Female, age 91, right hemisphere 42.0
1938 Female, age 85, left hemisphere 36.0
1787 Male, age 76, left hemisphere 32.7
2764 Male, age 80, right hemisphere 31.0
2613 Female, age 94, left hemisphere 29.1
Hippocampus, CA1
nTPM: 36.3
2749 Male, age 80, left hemisphere 41.0
1873 Female, age 85, both hemispheres 40.6
2045 Male, age 76, both hemispheres 36.5
2527 Male, age 74, both hemispheres 31.9
2082 Female, age 91, right hemisphere 31.4
Hippocampus, CA2
nTPM: 34.7
1892 Male, age 76, both hemispheres 40.8
2113 Female, age 91, right hemisphere 35.5
2249 Male, age 74, both hemispheres 34.6
1963 Male, age 80, left hemisphere 32.8
2437 Female, age 94, left hemisphere 32.5
1940 Female, age 85, left hemisphere 32.2
Hippocampus, CA3
nTPM: 34.0
1867 Male, age 76, both hemispheres 43.5
1891 Female, age 85, both hemispheres 41.6
2137 Male, age 80, left hemisphere 37.4
2861 Female, age 67, both hemispheres 34.8
2620 Female, age 94, left hemisphere 23.6
2436 Male, age 74, both hemispheres 23.3
Parahippocampal cortex
nTPM: 35.2
1850 Male, age 80, both hemispheres 40.6
2245 Female, age 91, both hemispheres 39.1
2532 Female, age 72, left hemisphere 38.9
2018 Male, age 76, both hemispheres 36.4
1990 Female, age 91, right hemisphere 35.0
2693 Female, age 94, both hemispheres 34.4
2692 Male, age 74, both hemispheres 32.5
1933 Female, age 85, both hemispheres 32.0
2250 Female, age 67, right hemisphere 31.6
2622 Female, age 67, right hemisphere 31.2
Perirhinal gyrus
nTPM: 32.3
2848 Male, age 76, right hemisphere 38.5
1841 Female, age 85, right hemisphere 37.6
1847 Female, age 91, left hemisphere 32.8
1794 Male, age 80, right hemisphere 28.1
2521 Female, age 94, right hemisphere 24.5
Subiculum
nTPM: 36.0
2042 Male, age 76, both hemispheres 42.0
1901 Male, age 80, both hemispheres 39.6
1977 Female, age 85, both hemispheres 39.1
2729 Female, age 91, right hemisphere 35.6
2438 Female, age 94, left hemisphere 31.6
2619 Male, age 74, both hemispheres 28.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 71.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 71.8
Samples: 197

Max nTPM: 141.6
Min nTPM: 30.5
Std nTPM: 18.9
Median nTPM: 67.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 141.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 138.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 137.3
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 134.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 116.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 115.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 111.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 109.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 108.8
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 108.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 107.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 333.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 333.8
FF:10169-103B7 60 years, female 362.4
FF:10153-102I9 76 years, female 305.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 70.8
Pig sample Sample description nTPM
Subiculum
nTPM: 66.4
Samples: 4

Max nTPM: 78.5
Min nTPM: 59.3
Sample A Female 78.5
Sample B Female 63.2
Sample C Male 59.3
Sample D Male 64.6
Dorsal hippocampus
nTPM: 70.8
Samples: 4

Max nTPM: 82.1
Min nTPM: 57.5
Sample A Female 80.0
Sample B Female 57.5
Sample C Male 82.1
Sample D Male 63.7
Entorhinal cortex
nTPM: 61.4
Samples: 4

Max nTPM: 64.5
Min nTPM: 55.2
Sample A Female 62.0
Sample B Female 63.9
Sample C Male 55.2
Sample D Male 64.5
Ventral hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 71.4
Min nTPM: 60.3
Sample A Female 60.5
Sample B Female 61.6
Sample C Male 60.3
Sample D Male 71.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.9
Samples: 4

Max nTPM: 23.4
Min nTPM: 19.7
Sample A Male 19.7
Sample B Male 23.4
Sample C Female 21.8
Sample D Female 22.8
Hippocampal formation
nTPM: 21.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 19.5
Sample A Male 23.8
Sample B Male 19.5
Sample C Female 23.2
Sample D Female 20.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70608547 Antisense, RP_050630_01_E07, Mouse strain C57BL/6J (56 days, male) 0.4

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