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IFT74
HPA
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  • IFT74
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

IFT74
Synonyms CCDC2, CMG-1, CMG1, FLJ22621
Gene descriptioni

Full gene name according to HGNC.

Intraflagellar transport 74
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 9
Cytoband p21.2
Chromosome location (bp) 26947039 - 27066134
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000096872 (version 109)
Entrez gene 80173
HGNC HGNC:21424
UniProt Q96LB3 (UniProt - Evidence at protein level)
neXtProt NX_Q96LB3
GeneCards IFT74
Antibodypedia IFT74 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the intraflagellar transport (IFT) complex B: together with IFT81, forms a tubulin-binding module that specifically mediates transport of tubulin within the cilium 1. Binds beta-tubulin via its basic region 2. Required for ciliogenesis 3. Essential for flagellogenesis during spermatogenesis 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Developmental protein
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Cilium biogenesis/degradation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a core intraflagellar transport (IFT) protein which belongs to a multi-protein complex involved in the transport of ciliary proteins along axonemal microtubules. IFT proteins are found at the base of the cilium as well as inside the cilium, where they assemble into long arrays between the ciliary base and tip. This protein, together with intraflagellar transport protein 81, binds and transports tubulin within cilia and is required for ciliogenesis. Naturally occurring mutations in this gene are associated with amyotrophic lateral sclerosis--frontotemporal dementia and Bardet-Biedl Syndrome. [provided by RefSeq, Mar 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
IFT74-201
ENSP00000369402
ENST00000380062
Q96LB3
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001669 [acrosomal vesicle]
GO:0003334 [keratinocyte development]
GO:0003682 [chromatin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0007219 [Notch signaling pathway]
GO:0007368 [determination of left/right symmetry]
GO:0007507 [heart development]
GO:0008544 [epidermis development]
GO:0010839 [negative regulation of keratinocyte proliferation]
GO:0030030 [cell projection organization]
GO:0030992 [intraciliary transport particle B]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0033630 [positive regulation of cell adhesion mediated by integrin]
GO:0035720 [intraciliary anterograde transport]
GO:0035735 [intraciliary transport involved in cilium assembly]
GO:0042073 [intraciliary transport]
GO:0042995 [cell projection]
GO:0043616 [keratinocyte proliferation]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
GO:0048487 [beta-tubulin binding]
GO:0050680 [negative regulation of epithelial cell proliferation]
GO:0060271 [cilium assembly]
GO:0097542 [ciliary tip]
GO:1905515 [non-motile cilium assembly]
Show all
600 aa
69.2 kDa
No 0
IFT74-202
ENSP00000393907
ENST00000429045
Q96LB3
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001669 [acrosomal vesicle]
GO:0005515 [protein binding]
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030030 [cell projection organization]
GO:0030992 [intraciliary transport particle B]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0035720 [intraciliary anterograde transport]
GO:0035735 [intraciliary transport involved in cilium assembly]
GO:0042073 [intraciliary transport]
GO:0042995 [cell projection]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
GO:0097542 [ciliary tip]
Show all
372 aa
42.3 kDa
No 0
IFT74-203
ENSP00000389224
ENST00000433700
Q96LB3
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001669 [acrosomal vesicle]
GO:0005515 [protein binding]
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030030 [cell projection organization]
GO:0030992 [intraciliary transport particle B]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0035720 [intraciliary anterograde transport]
GO:0035735 [intraciliary transport involved in cilium assembly]
GO:0042073 [intraciliary transport]
GO:0042995 [cell projection]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
GO:0097542 [ciliary tip]
Show all
600 aa
69.2 kDa
No 0
IFT74-204
ENSP00000404122
ENST00000443698
Q96LB3
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001669 [acrosomal vesicle]
GO:0005515 [protein binding]
GO:0005813 [centrosome]
GO:0005929 [cilium]
GO:0030030 [cell projection organization]
GO:0030992 [intraciliary transport particle B]
GO:0031410 [cytoplasmic vesicle]
GO:0031514 [motile cilium]
GO:0035720 [intraciliary anterograde transport]
GO:0035735 [intraciliary transport involved in cilium assembly]
GO:0042073 [intraciliary transport]
GO:0042995 [cell projection]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
GO:0097542 [ciliary tip]
Show all
600 aa
69.2 kDa
No 0
IFT74-207
ENSP00000430096
ENST00000517444
E5RGX6
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
Show all
126 aa
13.3 kDa
No 0
IFT74-208
ENSP00000430742
ENST00000517866
E5RIF0
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
Show all
147 aa
16.4 kDa
No 0
IFT74-209
ENSP00000430526
ENST00000518614
E5RJK3
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
Show all
146 aa
15.3 kDa
No 0
IFT74-210
ENSP00000430004
ENST00000519968
E5RH29
[Direct mapping] Intraflagellar transport protein 74 homolog
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Other congenital disorders of metabolism
   Congenital malformations
   Congenital malformations of the nervous system
   Reproductive system diseases
   Reproductive system diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005929 [cilium]
GO:0030992 [intraciliary transport particle B]
GO:0042073 [intraciliary transport]
GO:0048487 [beta-tubulin binding]
GO:0060271 [cilium assembly]
Show all
175 aa
19 kDa
No 0

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