Expression of SCD in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SCD is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 114.02

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

406.3

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	3374.6
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	3098.8
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	2279.2
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	2072.2
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	1998.1
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	1955.2
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	1936.6
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	1922.8
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	1920.1
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	1912.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	1876.1
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1865.4
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	1712.1
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	1643.2
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	1641.3
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	1572.7
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	1536.3
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	1496.3
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	1450.4
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	1422.4
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	1421.2
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	1386.1
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	1324.5
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	1283.5
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	1246.8
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	1235.8
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	1233.8
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	1182.1
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	1179.1
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	1087.4
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	1047.7
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	1025.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	1017.4
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	1016.7
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	972.8
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	956.8
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	942.7
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	876.6
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	857.2
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	853.2
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	852.4
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	844.3
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	839.1
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	813.7
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	804.5
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	797.4
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	797.4
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	792.4
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	782.2
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	766.8
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	762.8
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	750.6
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	734.7
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	713.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	685.5
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	682.3
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	680.9
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	680.8
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	675.3
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	673.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	666.3
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	650.3
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	647.2
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	644.5
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	628.8
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	627.7
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	622.3
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	621.1
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	617.8
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	616.9
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	615.8
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	608.3
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	602.1
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	582.5
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	573.3
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	570.8
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	568.7
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	564.0
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	557.9
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	556.3
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	552.3
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	542.9
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	541.7
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	539.8
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	539.1
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	538.7
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	536.8
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	536.5
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	528.6
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	515.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	510.1
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	508.7
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	499.0
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	498.7
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	498.2
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	492.5
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	491.9
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	489.4
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	483.1
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	482.0
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	478.9
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	466.1
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	464.4
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	464.1
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	461.9
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	455.6
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	453.8
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	453.5
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	451.2
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	449.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	445.9
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	444.4
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	439.9
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	438.8
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	430.5
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	429.7
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	425.0
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	423.6
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	422.2
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	420.5
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	419.6
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	417.5
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	405.6
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	401.5
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	395.8
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	390.6
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	385.8
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	383.5
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	381.5
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	377.4
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	376.0
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	372.8
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	372.6
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	372.5
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	370.2
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	369.4
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	363.8
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	361.4
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	360.4
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	357.7
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	356.8
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	351.3
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	348.3
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	345.9
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	342.6
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	342.1
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	339.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	333.9
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	330.4
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	328.5
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	324.2
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	322.1
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	319.7
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	318.9
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	315.8
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	314.9
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	312.9
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	307.4
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	307.4
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	304.7
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	302.5
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	299.5
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	298.3
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	292.2
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	289.9
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	289.5
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	285.6
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	285.0
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	281.5
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	280.6
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	278.7
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	274.4
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	271.9
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	270.3
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	264.0
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	263.8
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	263.5
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	262.3
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	261.2
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	252.2
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	249.4
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	245.8
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	245.0
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	244.2
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	241.1
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	239.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	238.0
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	237.5
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	237.4
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	235.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	234.2
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	232.8
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	232.3
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	223.2
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	223.0
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	222.0
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	219.8
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	215.2
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	211.0
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	208.7
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	207.4
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	203.8
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	203.5
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	203.2
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	203.2
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	203.1
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	201.9
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	198.3
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	197.3
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	197.1
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	195.3
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	191.1
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	188.4
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	186.7
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	185.7
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	184.1
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	182.2
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	181.3
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	180.3
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	179.9
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	172.0
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	170.4
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	169.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	169.4
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	169.1
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	168.4
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	167.7
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	167.5
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	167.3
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	166.7
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	164.9
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	164.6
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	163.6
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	163.0
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	158.0
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	157.9
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	156.8
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	156.0
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	155.6
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	150.4
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	150.2
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	150.0
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	147.8
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	147.1
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	144.7
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	143.7
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	142.9
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	141.4
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	137.7
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	133.8
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	132.6
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	130.7
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	128.3
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	123.9
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	123.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	118.4
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	116.8
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	115.9
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	115.1
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	114.9
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	113.1
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	111.7
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	111.5
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	111.4
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	110.2
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	109.9
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	108.8
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	108.2
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	103.8
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	103.3
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	103.2
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	103.0
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	102.9
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	101.6
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	100.5
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	100.5
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	97.6
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	96.5
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	96.4
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	91.1
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	90.3
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	90.1
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	88.6
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	86.6
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	82.9
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	82.9
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	81.7
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	81.4
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	80.7
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	78.8
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	78.6
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	78.5
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	75.4
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	74.1
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	73.8
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	73.0
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	69.8
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	67.1
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	66.6
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	64.2
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	61.2
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	60.3
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	58.7
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	58.5
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	54.3
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	53.8
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	53.4
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	52.9
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	51.6
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	51.2
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	51.2
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	48.6
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	48.0
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	47.6
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	46.9
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	46.7
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	42.1
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	42.1
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	42.0
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	41.7
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	41.0
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	39.4
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	37.5
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	36.6
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	35.6
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	33.6
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	32.0
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	32.0
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	31.3
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	30.5
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	30.0
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	29.8
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	29.6
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	26.4
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	26.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	24.9
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	24.5
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	24.5
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	22.6
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	21.2
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	19.1
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	18.2
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	17.9
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	17.8
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	16.1
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	15.5
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	14.7
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	13.7
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	13.7
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	10.6
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	10.3
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	10.0
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	9.9
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	9.0
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	8.8
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	8.8
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	8.1
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	7.3
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	7.2
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	6.8
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	5.6
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	4.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

SCD is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 771.15

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

585.1

Number of samples

231

Samples

Sample	Description	pTPM
DO45191	61 years, female, NA, stage:2, alive, 1200 days	4702.7
DO48751	68 years, male, NA, stage:2, dead, 480 days	4688.6
DO45239	42 years, male, NA, stage:2, alive, 870 days	3850.0
DO45131	53 years, male, NA, stage:4, dead, 360 days	3337.3
DO45223	67 years, male, NA, stage:4, alive, 1020 days	3007.7
DO48672	81 years, male, NA, stage:2, alive, 450 days	2888.1
DO23535	67 years, male, NA, stage:1, alive, 960 days	2385.0
DO45269	59 years, male, NA, stage:3, alive, 750 days	2247.9
DO45161	74 years, male, NA, stage:2, dead, 540 days	2189.4
DO45115	81 years, male, NA, stage:2, alive, 840 days	2119.5
DO48757	68 years, female, NA, stage:3, alive, 480 days	2063.3
DO45093	71 years, male, NA, stage:2, dead, 720 days	1971.5
DO45219	78 years, male, NA, stage:2, alive, 1080 days	1879.1
DO45217	69 years, female, NA, stage:3, dead, 270 days	1725.9
DO45183	72 years, female, NA, stage:2, dead, 570 days	1707.3
DO50785	37 years, male, NA, stage:4, dead, 90 days	1704.5
DO48723	73 years, male, NA, stage:1, alive, 600 days	1696.7
DO45169	74 years, male, NA, stage:3, alive, 1350 days	1672.8
DO45173	63 years, male, NA, stage:3, alive, 1170 days	1598.2
DO45163	76 years, male, NA, stage:2, alive, 960 days	1534.2
DO45265	73 years, male, NA, stage:3, alive, 1020 days	1502.5
DO23508	79 years, female, NA, stage:2, alive, 390 days	1466.0
DO45171	56 years, male, NA, stage:3, alive, 600 days	1427.2
DO48743	69 years, female, NA, stage:2, alive, 570 days	1425.0
DO45092	62 years, male, NA, stage:4, dead, 1200 days	1409.7
DO50789	73 years, female, NA, stage:2, alive, 570 days	1396.1
DO50806	70 years, male, NA, stage:4, alive, 540 days	1392.0
DO45245	75 years, female, NA, stage:2, dead, 240 days	1378.3
DO50787	63 years, male, NA, stage:3, alive, 480 days	1369.8
DO50811	62 years, male, NA, stage:1, alive, 450 days	1369.8
DO45267	73 years, male, NA, stage:3, dead, 570 days	1312.9
DO48706	72 years, male, NA, stage:2, alive, 870 days	1189.4
DO45227	57 years, female, NA, stage:2, alive, 1020 days	1177.4
DO45213	58 years, male, NA, stage:1, alive, 1200 days	1138.7
DO48727	81 years, female, NA, stage:2, dead, 390 days	1133.9
DO45117	73 years, female, NA, stage:2, dead, 1110 days	1130.5
DO45137	38 years, male, NA, stage:1, alive, 1320 days	1107.7
DO48712	50 years, male, NA, stage:2, alive, 810 days	1060.3
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1059.6
DO45101	63 years, male, NA, stage:2, alive, 1680 days	1056.5
DO50825	70 years, male, NA, stage:2, alive, 390 days	1055.8
DO48730	73 years, female, NA, stage:2, alive, 630 days	1014.8
DO45159	65 years, male, NA, stage:3, alive, 1470 days	1004.7
DO23524	71 years, female, NA, stage:2, alive, 1050 days	992.7
DO23549	74 years, male, NA, stage:3, alive, 990 days	954.4
DO48681	57 years, male, NA, stage:2, alive, 900 days	945.9
DO45209	70 years, male, NA, stage:4, alive, 1350 days	931.8
DO45187	32 years, female, NA, stage:1, alive, 1260 days	930.2
DO50820	77 years, female, NA, stage:3, alive, 510 days	900.7
DO48697	64 years, female, NA, stage:2, dead, 810 days	899.2
DO45096	69 years, male, NA, stage:2, dead, 1290 days	896.1
DO45165	75 years, male, NA, stage:2, alive, 690 days	895.5
DO45091	56 years, male, NA, stage:2, dead, 1320 days	884.6
DO23514	64 years, male, NA, stage:2, alive, 1290 days	878.5
DO48728	74 years, female, NA, stage:2, alive, 150 days	860.9
DO48715	58 years, female, NA, stage:2, dead, 690 days	853.3
DO23539	77 years, male, NA, stage:1, alive, 1110 days	804.0
DO23511	83 years, female, NA, stage:3, dead, 180 days	799.2
DO45099	46 years, male, NA, stage:3, alive, 1590 days	791.7
DO50793	76 years, male, NA, stage:4, alive, 540 days	775.7
DO48682	72 years, female, NA, stage:3, dead, 120 days	771.1
DO45129	61 years, male, NA, stage:3, alive, 1470 days	770.4
DO48720	62 years, female, NA, stage:2, alive, 570 days	766.9
DO45229	74 years, male, NA, stage:1, alive, 990 days	765.8
DO45221	75 years, female, NA, stage:4, dead, 390 days	752.7
DO23529	72 years, male, NA, stage:4, alive, 930 days	747.1
DO23515	71 years, male, NA, stage:2, alive, 1230 days	709.9
DO45241	49 years, male, NA, stage:1, alive, 1080 days	709.0
DO50778	60 years, male, NA, stage:4, alive, 630 days	699.1
DO50799	66 years, female, NA, stage:2, alive, 540 days	655.9
DO45211	76 years, male, NA, stage:3, alive, 240 days	642.9
DO45201	49 years, male, NA, stage:1, alive, 900 days	639.8
DO45113	58 years, male, NA, stage:3, alive, 1560 days	635.6
DO50822	66 years, male, NA, stage:2, alive, 510 days	632.2
DO23552	80 years, female, NA, stage:1, alive, 810 days	622.0
DO48700	78 years, female, NA, stage:2, alive, 810 days	609.0
DO50844	75 years, male, NA, stage:4, alive, 300 days	605.4
DO50804	81 years, male, NA, stage:2, alive, 720 days	595.3
DO48725	66 years, male, NA, stage:1, alive, 780 days	582.1
DO50855	47 years, male, NA, stage:2, alive, 570 days	578.7
DO45119	74 years, male, NA, stage:3, dead, 510 days	575.6
DO48733	72 years, male, NA, stage:2, alive, 600 days	567.7
DO23516	69 years, male, NA, stage:3, dead, 20 days	545.6
DO23510	80 years, female, NA, stage:2, alive, 870 days	538.6
DO50850	74 years, male, NA, stage:3, alive, 720 days	522.0
DO45255	81 years, male, NA, stage:3, alive, 720 days	499.1
DO45281	83 years, male, NA, stage:4, alive, 750 days	493.8
DO48695	77 years, male, NA, stage:2, alive, 720 days	492.6
DO50815	62 years, male, NA, stage:3, alive, 150 days	478.4
DO45277	64 years, male, NA, stage:3, alive, 600 days	472.9
DO23542	66 years, male, NA, stage:3, alive, 960 days	465.3
DO45103	47 years, male, NA, stage:3, alive, 450 days	450.9
DO45257	46 years, male, NA, stage:3, alive, 810 days	442.7
DO45157	62 years, male, NA, stage:2, alive, 1980 days	437.1
DO45243	74 years, female, NA, stage:3, alive, 930 days	433.6
DO45259	65 years, male, NA, stage:3, alive, 330 days	433.0
DO50845	72 years, male, NA, stage:3, alive, 210 days	425.1
DO23525	71 years, male, NA, stage:4, alive, 1050 days	416.4
DO50859	77 years, male, NA, stage:2, alive, 180 days	416.2
DO48761	55 years, male, NA, stage:2, alive, 870 days	409.4
DO23537	79 years, male, NA, stage:2, dead, 900 days	400.3
DO48716	71 years, male, NA, stage:2, alive, 720 days	398.8
DO45175	74 years, male, NA, stage:2, alive, 1140 days	376.1
DO45193	68 years, female, NA, stage:4, dead, 120 days	374.2
DO45303	62 years, female, NA, stage:3, alive, 990 days	371.3
DO45135	77 years, male, NA, stage:1, alive, 1410 days	361.5
DO48759	73 years, male, NA, stage:3, alive, 720 days	352.9
DO23519	65 years, male, NA, stage:3, alive, 630 days	343.4
DO45105	61 years, male, NA, stage:1, alive, 1680 days	340.5
DO23547	74 years, male, NA, stage:1, alive, 1020 days	336.7
DO23521	63 years, male, NA, stage:3, alive, 1110 days	324.3
DO45199	86 years, female, NA, stage:2, alive, 1350 days	317.5
DO48721	58 years, female, NA, stage:1, alive, 900 days	316.8
DO23513	76 years, male, NA, stage:3, alive, 1200 days	315.7
DO48741	64 years, male, NA, stage:3, alive, 240 days	311.9
DO45233	83 years, male, NA, stage:3, alive, 900 days	311.9
DO45153	77 years, female, NA, stage:2, alive, 1380 days	311.2
DO23527	72 years, male, NA, stage:1, alive, 1050 days	308.3
DO45179	78 years, female, NA, stage:2, alive, 600 days	304.1
DO45275	65 years, male, NA, stage:3, dead, 10 days	299.9
DO50776	75 years, male, NA, stage:1, alive, 690 days	290.5
DO50829	78 years, male, NA, stage:3, alive, 570 days	290.2
DO45121	61 years, male, NA, stage:3, alive, 1530 days	286.0
DO45231	84 years, male, NA, stage:2, alive, 930 days	284.2
DO45145	78 years, male, NA, stage:3, dead, 60 days	282.1
DO48742	76 years, male, NA, stage:2, alive, 600 days	278.5
DO48704	68 years, female, NA, stage:3, alive, 750 days	266.0
DO45109	63 years, male, NA, stage:2, alive, 1590 days	264.6
DO23548	78 years, female, NA, stage:1, alive, 840 days	260.1
DO45143	69 years, male, NA, stage:3, alive, 1290 days	255.2
DO50816	63 years, male, NA, stage:2, alive, 390 days	254.7
DO48677	58 years, male, NA, stage:3, alive, 1140 days	232.9
DO45247	31 years, female, NA, stage:2, alive, 210 days	225.7
DO227801	77 years, female, NA, stage:1, alive, 660 days	223.6
DO45203	71 years, female, NA, stage:2, alive, 1170 days	219.1
DO48693	71 years, male, NA, stage:2, alive, 900 days	218.6
DO48679	72 years, male, NA, stage:2, alive, 1200 days	217.9
DO23543	63 years, male, NA, stage:2, alive, 1020 days	216.6
DO45127	73 years, male, NA, stage:3, dead, 420 days	210.7
DO45155	69 years, male, NA, stage:2, alive, 2160 days	206.0
DO48717	54 years, male, NA, stage:4, dead, 180 days	193.4
DO50809	56 years, male, NA, stage:3, dead, 720 days	190.8
DO45215	65 years, male, NA, stage:2, alive, 1170 days	187.9
DO45149	70 years, female, NA, stage:2, alive, 1260 days	184.1
DO50813	56 years, male, NA, stage:2, alive, 420 days	183.4
DO45141	73 years, male, NA, stage:2, alive, 1320 days	176.3
DO48736	76 years, female, NA, stage:1, alive, 600 days	176.2
DO45095	66 years, male, NA, stage:2, alive, 1620 days	175.6
DO45097	69 years, male, NA, stage:3, alive, 1620 days	162.2
DO23533	61 years, male, NA, stage:2, alive, 900 days	162.0
DO23545	67 years, male, NA, stage:2, dead, 570 days	161.9
DO45299	70 years, female, NA, stage:1, alive, 1440 days	161.8
DO48760	70 years, female, NA, stage:2, alive, 690 days	156.9
DO45289	78 years, female, NA, stage:3, alive, 360 days	156.3
DO45273	62 years, male, NA, stage:2, alive, 480 days	156.3
DO48719	80 years, male, NA, stage:2, alive, 690 days	153.1
DO23526	66 years, male, NA, stage:3, alive, 1050 days	141.8
DO45123	78 years, female, NA, stage:2, dead, 570 days	133.7
DO23546	63 years, male, NA, stage:2, alive, 1050 days	133.2
DO50802	49 years, male, NA, stage:2, alive, 930 days	131.7
DO23538	67 years, male, NA, stage:2, alive, 450 days	131.2
DO50803	62 years, female, NA, stage:1, alive, 540 days	131.0
DO50774	68 years, female, NA, stage:2, alive, 720 days	130.5
DO50805	72 years, male, NA, stage:2, alive, 690 days	127.4
DO48747	62 years, male, NA, stage:3, alive, 540 days	125.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	123.2
DO48737	52 years, male, NA, stage:1, alive, 720 days	118.2
DO48701	78 years, male, NA, stage:2, alive, 780 days	114.9
DO45181	84 years, female, NA, stage:2, alive, 1200 days	113.9
DO45139	63 years, male, NA, stage:3, alive, 1320 days	112.0
DO23523	52 years, male, NA, stage:3, alive, 1080 days	110.5
DO45235	68 years, female, NA, stage:1, alive, 900 days	105.9
DO23536	56 years, male, NA, stage:2, alive, 930 days	105.6
DO45094	76 years, male, NA, stage:3, alive, 1650 days	102.1
DO23540	73 years, male, NA, stage:1, alive, 750 days	101.2
DO45111	74 years, male, NA, stage:2, alive, 1590 days	96.5
DO23541	65 years, male, NA, stage:2, alive, 930 days	93.2
DO45301	56 years, male, NA, stage:2, dead, 1440 days	91.8
DO50857	72 years, male, NA, stage:2, alive, 210 days	91.4
DO50783	62 years, male, NA, stage:3, alive, 480 days	89.6
DO45253	50 years, male, NA, stage:2, alive, 870 days	82.8
DO23544	67 years, male, NA, stage:2, alive, 960 days	82.8
DO23530	53 years, male, NA, stage:4, dead, 180 days	82.8
DO45133	64 years, male, NA, stage:3, dead, 660 days	81.7
DO23531	78 years, female, NA, stage:3, alive, 900 days	81.1
DO23518	67 years, male, NA, stage:2, alive, 1320 days	79.1
DO23509	60 years, male, NA, stage:3, dead, 780 days	78.5
DO45167	67 years, male, NA, stage:2, dead, 1440 days	77.6
DO45197	51 years, male, NA, stage:2, alive, 1170 days	76.7
DO45205	67 years, female, NA, stage:2, dead, 90 days	75.3
DO45125	58 years, male, NA, stage:3, alive, 1680 days	73.9
DO50818	65 years, male, NA, stage:2, alive, 510 days	71.6
DO23517	62 years, male, NA, stage:2, alive, 1200 days	67.9
DO45279	67 years, male, NA, stage:3, alive, 1290 days	67.8
DO45189	85 years, female, NA, stage:2, alive, 1200 days	66.5
DO45185	89 years, male, NA, stage:2, alive, 600 days	62.0
DO45285	59 years, male, NA, stage:3, alive, 480 days	61.5
DO45305	66 years, male, NA, stage:4, alive, 300 days	60.8
DO50840	49 years, male, NA, stage:2, alive, 330 days	60.5
DO48674	80 years, male, NA, stage:2, alive, 1260 days	59.6
DO50808	68 years, male, NA, stage:2, alive, 570 days	57.6
DO45263	67 years, male, NA, stage:3, dead, 270 days	56.4
DO50817	75 years, male, NA, stage:2, alive, 390 days	56.1
DO45307	54 years, female, NA, stage:4, dead, 240 days	50.3
DO45225	69 years, male, NA, stage:1, alive, 1050 days	47.6
DO50791	79 years, female, NA, stage:1, dead, 480 days	46.4
DO227643	79 years, male, NA, stage:2, alive, 1260 days	43.8
DO45249	57 years, male, NA, stage:1, alive, 630 days	41.3
DO45195	62 years, male, NA, stage:1, alive, 390 days	40.0
DO23550	69 years, male, NA, stage:1, alive, 990 days	35.5
DO50839	47 years, female, NA, stage:3, alive, 330 days	32.8
DO50814	83 years, male, NA, stage:3, alive, 420 days	31.7
DO23528	45 years, female, NA, stage:2, alive, 1020 days	31.3
DO45287	74 years, male, NA, stage:1, alive, 390 days	29.5
DO23534	60 years, male, NA, stage:2, alive, 840 days	28.8
DO45237	58 years, male, NA, stage:2, alive, 900 days	28.1
DO23551	73 years, male, NA, stage:3, dead, 150 days	28.1
DO45261	74 years, male, NA, stage:3, alive, 990 days	25.9
DO45107	63 years, female, NA, stage:2, alive, 1710 days	24.2
DO50819	72 years, female, NA, stage:2, alive, 510 days	22.8
DO50798	77 years, male, NA, stage:3, dead, 30 days	19.1
DO50807	67 years, male, NA, stage:1, alive, 540 days	17.9
DO45297	61 years, female, NA, stage:4, dead, 1260 days	17.6
DO45283	60 years, male, NA, stage:3, alive, 510 days	17.4
DO50800	74 years, male, NA, stage:2, alive, 510 days	16.7
DO23512	60 years, male, NA, stage:1, alive, 1260 days	16.4
DO45207	68 years, male, NA, stage:1, alive, 1050 days	16.0
DO23532	71 years, female, NA, stage:1, alive, 960 days	12.5
DO48746	76 years, male, NA, stage:3, alive, 570 days	10.4
DO48732	73 years, male, NA, stage:3, alive, 630 days	7.6
DO50832	73 years, male, NA, stage:3, alive, 90 days	5.2
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
135	Tumor	2.9
387	Tumor	2.4
567	Tumor	2.3
537	Tumor	2.3
1043	Tumor	2.2
617	Tumor	2.1
477	Tumor	2.0
391	Tumor	1.8
951	Tumor	1.7
883	Tumor	1.6
983	Tumor	1.5
965	Tumor	1.5
187	Tumor	1.5
267	Tumor	1.4
517	Tumor	1.4
112	Tumor	1.4
533	Tumor	1.3
817	Tumor	1.3
421	Tumor	1.2
1025	Tumor	1.2
685	Tumor	1.1
367	Tumor	1.1
435	Tumor	1.1
815	Tumor	1.1
361	Tumor	1.1
473	Tumor	1.1
851	Tumor	1.1
743	Tumor	1.1
455	Tumor	1.0
451	Tumor	1.0
257	Tumor	0.9
861	Tumor	0.9
413	Tumor	0.9
1021	Tumor	0.9
227	Tumor	0.9
957	Tumor	0.9
147	Tumor	0.9
127	Tumor	0.8
921	Tumor	0.8
223	Tumor	0.8
573	Tumor	0.7
1027	Tumor	0.7
967	Tumor	0.7
285	Tumor	0.7
1041	Tumor	0.7
745	Tumor	0.7
755	Tumor	0.7
231	Tumor	0.7
145	Tumor	0.7
557	Tumor	0.6
563	Tumor	0.6
671	Tumor	0.6
813	Tumor	0.5
161	Tumor	0.5
171	Tumor	0.5
915	Tumor	0.5
113	Tumor	0.5
535	Tumor	0.4
355	Tumor	0.4
925	Tumor	0.4
715	Tumor	0.4
443	Tumor	0.4
431	Tumor	0.4
568	Normal	0.4
497	Tumor	0.3
425	Tumor	0.3
635	Tumor	0.3
523	Tumor	0.3
385	Tumor	0.3
331	Tumor	0.2
272	Normal	0.2
471	Tumor	0.2
975	Tumor	0.1
641	Tumor	0.1
191	Tumor	0.1
388	Normal	0.1
923	Tumor	0.1
724	Normal	0.1
865	Tumor	0.1
132	Normal	0.1
823	Tumor	0.1
665	Tumor	0.1
864	Normal	0.0
375	Tumor	0.0
463	Tumor	0.0
131	Tumor	0.0
123	Tumor	-0.1
661	Tumor	-0.1
327	Tumor	-0.1
136	Normal	-0.1
494	Normal	-0.1
416	Normal	-0.1
228	Normal	-0.1
816	Normal	-0.1
956	Normal	-0.1
363	Tumor	-0.1
424	Normal	-0.2
217	Tumor	-0.2
313	Tumor	-0.2
728	Normal	-0.2
213	Tumor	-0.2
953	Tumor	-0.2
1042	Normal	-0.2
297	Tumor	-0.2
737	Tumor	-0.2
386	Normal	-0.2
125	Tumor	-0.3
422	Normal	-0.3
553	Tumor	-0.3
188	Normal	-0.3
452	Normal	-0.3
746	Normal	-0.3
414	Normal	-0.3
564	Normal	-0.3
258	Normal	-0.3
392	Normal	-0.3
185	Tumor	-0.3
877	Tumor	-0.3
312	Normal	-0.4
466	Normal	-0.4
818	Normal	-0.4
858	Normal	-0.4
232	Normal	-0.4
918	Normal	-0.4
618	Normal	-0.4
952	Normal	-0.4
262	Normal	-0.4
938	Normal	-0.4
468	Normal	-0.5
1015	Tumor	-0.5
616	Normal	-0.5
538	Normal	-0.5
648	Normal	-0.5
341	Tumor	-0.5
268	Normal	-0.5
126	Normal	-0.5
873	Tumor	-0.5
394	Normal	-0.5
852	Normal	-0.5
742	Normal	-0.5
1026	Normal	-0.5
365	Tumor	-0.5
311	Tumor	-0.5
642	Normal	-0.5
186	Normal	-0.5
558	Normal	-0.5
271	Tumor	-0.5
432	Normal	-0.5
666	Normal	-0.5
574	Normal	-0.5
411	Tumor	-0.5
128	Normal	-0.6
881	Tumor	-0.6
814	Normal	-0.6
1031	Tumor	-0.6
663	Tumor	-0.6
445	Tumor	-0.6
483	Tumor	-0.6
884	Normal	-0.6
138	Normal	-0.6
824	Normal	-0.6
916	Normal	-0.6
124	Normal	-0.6
874	Normal	-0.6
283	Tumor	-0.6
396	Normal	-0.6
351	Tumor	-0.6
343	Tumor	-0.7
395	Tumor	-0.7
723	Tumor	-0.7
261	Tumor	-0.7
862	Normal	-0.7
284	Normal	-0.7
963	Tumor	-0.7
628	Normal	-0.7
1032	Normal	-0.7
428	Normal	-0.7
362	Normal	-0.7
277	Tumor	-0.7
426	Normal	-0.7
937	Tumor	-0.7
393	Tumor	-0.7
461	Tumor	-0.7
976	Normal	-0.7
436	Normal	-0.7
366	Normal	-0.7
664	Normal	-0.7
376	Normal	-0.7
534	Normal	-0.8
456	Normal	-0.8
462	Normal	-0.8
146	Normal	-0.8
713	Tumor	-0.8
955	Tumor	-0.8
357	Tumor	-0.8
472	Normal	-0.8
358	Normal	-0.8
192	Normal	-0.8
314	Normal	-0.8
1044	Normal	-0.8
114	Normal	-0.8
878	Normal	-0.8
478	Normal	-0.8
142	Normal	-0.8
474	Normal	-0.8
224	Normal	-0.8
221	Tumor	-0.8
384	Normal	-0.9
172	Normal	-0.9
513	Tumor	-0.9
525	Tumor	-0.9
222	Normal	-0.9
1028	Normal	-0.9
434	Normal	-0.9
882	Normal	-0.9
148	Normal	-0.9
527	Tumor	-0.9
924	Normal	-0.9
866	Normal	-0.9
912	Normal	-0.9
353	Tumor	-0.9
572	Normal	-0.9
141	Tumor	-0.9
911	Tumor	-0.9
738	Normal	-0.9
368	Normal	-0.9
427	Tumor	-0.9
627	Tumor	-0.9
672	Normal	-0.9
978	Normal	-0.9
214	Normal	-0.9
491	Tumor	-0.9
958	Normal	-0.9
944	Normal	-0.9
982	Normal	-0.9
662	Normal	-0.9
111	Normal	-0.9
467	Tumor	-1.0
514	Normal	-1.0
464	Normal	-1.0
423	Tumor	-1.0
137	Tumor	-1.0
741	Tumor	-1.0
286	Normal	-1.0
926	Normal	-1.0
528	Normal	-1.0
212	Normal	-1.0
636	Normal	-1.0
571	Tumor	-1.0
446	Normal	-1.0
857	Tumor	-1.0
954	Normal	-1.0
722	Normal	-1.0
721	Tumor	-1.0
686	Normal	-1.1
727	Tumor	-1.1
966	Normal	-1.1
196	Normal	-1.1
433	Tumor	-1.1
716	Normal	-1.1
332	Normal	-1.1
298	Normal	-1.1
278	Normal	-1.1
383	Tumor	-1.1
447	Tumor	-1.1
744	Normal	-1.1
415	Tumor	-1.1
554	Normal	-1.2
162	Normal	-1.2
493	Tumor	-1.2
218	Normal	-1.2
696	Normal	-1.2
977	Tumor	-1.2
964	Normal	-1.3
448	Normal	-1.3
412	Normal	-1.3
914	Normal	-1.3
786	Normal	-1.3
868	Normal	-1.3
714	Normal	-1.3
546	Normal	-1.3
195	Tumor	-1.3
615	Tumor	-1.3
1022	Normal	-1.3
444	Normal	-1.3
518	Normal	-1.3
1016	Normal	-1.3
1013	Tumor	-1.4
968	Normal	-1.4
328	Normal	-1.4
356	Normal	-1.5
492	Normal	-1.5
917	Tumor	-1.5
756	Normal	-1.5
515	Tumor	-1.5
697	Tumor	-1.5
922	Normal	-1.5
536	Normal	-1.5
863	Tumor	-1.5
984	Normal	-1.6
943	Tumor	-1.6
545	Tumor	-1.6
913	Tumor	-1.6
482	Normal	-1.6
211	Tumor	-1.6
465	Tumor	-1.6
524	Normal	-1.6
352	Normal	-1.6
778	Normal	-1.6
498	Normal	-1.7
487	Tumor	-1.7
364	Normal	-1.7
647	Tumor	-1.7
526	Normal	-1.7
1014	Normal	-1.8
516	Normal	-1.8
785	Tumor	-1.8
1046	Normal	-1.9
777	Tumor	-1.9
981	Tumor	-2.0
698	Normal	-2.0
354	Normal	-2.0
484	Normal	-2.0
867	Tumor	-2.0
695	Tumor	-2.1
488	Normal	-2.1
481	Tumor	-2.2
342	Normal	-2.3
344	Normal	-2.4
1045	Tumor	-2.9
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA012107
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS