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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:40.8 nTPM
HPA Brain:203.4 nTPM
GTEx:40.8 nTPM
FANTOM5:295.3 Scaled Tags Per Million
Pig:102.6 nTPM
Mouse:91.1 nTPM
Allen mouse:19.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035061Antibody HPA035062
Glial cells MediumNot detected
Neuronal cells HighMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

203.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 194.9
2289 Male, age 61, right hemisphere 233.2
2846 Female, age 79, unknown 224.8
2290 Female, age 72, unknown 215.4
1781 Male, age 74, unknown 198.4
1857 Female, age 85, left hemisphere 194.9
2288 Male, age 75, left hemisphere 184.2
1854 Male, age 80, left hemisphere 182.8
2481 Female, age 94, left hemisphere 125.5
Globus pallidus, externus
nTPM: 104.4
2646 Male, age 61, right hemisphere 129.7
2567 Female, age 72, unknown 121.8
2395 Male, age 75, both hemispheres 110.5
2772 Female, age 79, unknown 84.1
1996 Male, age 80, right hemisphere 75.8
Globus pallidus, internus
nTPM: 99.1
2566 Female, age 72, unknown 114.9
2111 Female, age 85, right hemisphere 113.5
2287 Male, age 75, right hemisphere 106.3
2483 Female, age 94, right hemisphere 96.7
1818 Male, age 74, unknown 93.6
2778 Female, age 91, both hemispheres 93.1
2037 Male, age 80, right hemisphere 75.3
Nucleus accumbens
nTPM: 181.8
1783 Male, age 74, unknown 238.8
2824 Male, age 61, right hemisphere 228.3
1856 Female, age 91, right hemisphere 218.0
1806 Female, age 85, left hemisphere 194.2
2286 Male, age 75, left hemisphere 173.7
2698 Female, age 72, unknown 167.4
2391 Female, age 94, left hemisphere 126.0
2732 Male, age 80, right hemisphere 108.2
Nucleus basalis of Meynert
nTPM: 162.3
2484 Female, age 94, left hemisphere 204.6
2393 Male, age 80, right hemisphere 153.6
2821 Male, age 75, both hemispheres 150.0
2569 Male, age 61, both hemispheres 141.2
Nucleus of the diagonal band
nTPM: 194.6
2029 Male, age 61, right hemisphere 253.5
2775 Male, age 80, right hemisphere 212.2
2195 Female, age 85, both hemispheres 202.4
1812 Female, age 91, both hemispheres 202.0
1979 Male, age 74, unknown 102.7
Putamen
nTPM: 203.4
1829 Male, age 74, unknown 228.2
1838 Male, age 80, right hemisphere 220.8
2466 Female, age 79, unknown 213.8
2647 Male, age 75, left hemisphere 208.7
2489 Female, age 72, unknown 203.0
1937 Female, age 91, right hemisphere 196.2
2482 Female, age 94, left hemisphere 152.9
Septal nuclei
nTPM: 159.8
1960 Male, age 74, unknown 236.5
2031 Female, age 72, unknown 201.6
2629 Female, age 94, right hemisphere 193.1
2009 Female, age 91, both hemispheres 164.8
2059 Female, age 85, both hemispheres 149.0
2394 Male, age 61, left hemisphere 108.1
2199 Male, age 80, right hemisphere 65.2
Stria terminalis, bed nucleus
nTPM: 171.4
2486 Female, age 94, both hemispheres 215.9
1974 Female, age 91, both hemispheres 201.4
2201 Male, age 74, unknown 96.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 37.1
Samples: 246

Max nTPM: 72.2
Min nTPM: 6.8
Std nTPM: 13.7
Median nTPM: 38.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 72.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 70.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 66.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 65.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 65.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 65.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 63.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 63.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 62.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 61.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 61.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 61.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 60.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 58.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 58.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 58.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 56.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 56.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 55.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 55.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 54.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 54.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 54.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 53.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 53.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 53.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 52.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 52.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 52.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 52.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 50.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 50.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 50.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 49.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 49.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 49.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 49.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 49.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 49.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 49.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 48.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 48.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 48.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 48.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 48.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 48.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 48.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 48.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 46.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 46.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 46.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 46.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 46.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 46.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 45.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 45.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 45.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 45.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 45.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 45.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 45.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 44.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 44.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 44.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 44.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 43.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 43.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 43.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 43.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 42.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 42.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 42.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 42.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 42.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 42.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 42.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 41.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 41.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 41.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 41.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 41.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 41.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 40.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 40.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 40.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 40.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 40.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 39.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 39.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 39.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 39.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 39.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 39.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 39.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 39.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 39.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 38.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 38.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 38.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 38.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 38.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 38.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 37.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 37.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 37.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 37.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 37.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 37.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 37.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 37.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 37.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 36.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 36.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 36.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 36.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 36.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 35.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 35.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 35.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 35.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 34.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 34.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 34.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 34.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 34.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 33.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 33.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 33.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 33.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 32.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 32.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 32.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 32.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 32.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 32.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 31.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 31.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 31.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 31.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 31.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 30.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 30.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 30.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 30.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 30.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 30.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 29.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 29.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 29.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 29.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 29.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 29.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 29.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 28.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 28.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 28.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 27.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 26.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 26.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 26.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 26.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 26.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 26.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 26.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 25.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 24.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 23.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 23.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 22.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 22.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 22.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 22.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 22.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 22.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 22.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 22.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 21.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 21.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 21.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 21.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 21.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 20.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 20.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 20.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 19.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 19.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 18.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 18.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 17.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 17.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 17.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 17.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 17.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 17.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 16.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 16.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 15.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 15.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 15.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 14.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 14.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 13.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 12.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 12.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 10.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 9.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 6.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 40.8
Samples: 246

Max nTPM: 77.6
Min nTPM: 2.6
Std nTPM: 15.3
Median nTPM: 42.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 77.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 71.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 70.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 69.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 67.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 66.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 66.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 66.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 66.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 66.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 66.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 65.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 65.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 64.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 62.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 62.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 62.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 62.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 61.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 59.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 59.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 59.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 58.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 58.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 58.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 58.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 57.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 57.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 57.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 57.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 57.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 57.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 56.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 56.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 56.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 56.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 56.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 55.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 55.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 55.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 55.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 54.6
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 54.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 54.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 53.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 53.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 53.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 53.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 52.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 52.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 52.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 52.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 52.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 52.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 51.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 51.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 51.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 51.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 51.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 51.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 51.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 51.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 51.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 51.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 51.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 51.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 50.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 50.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 50.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 49.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 49.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 49.6
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 49.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 49.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 49.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 49.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 49.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 48.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 47.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 47.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 47.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 47.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 46.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 46.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 46.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 46.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 46.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 46.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 46.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 46.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 46.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 45.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 45.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 45.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 45.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 45.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 45.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 45.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 44.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 44.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 43.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 43.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 43.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 42.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 42.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 42.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 42.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 42.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 42.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 42.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 41.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 41.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 41.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 41.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 41.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 41.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 41.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 41.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 41.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 40.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 40.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 40.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 39.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 39.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 39.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 39.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 39.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 38.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 38.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 38.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 38.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 37.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 37.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 37.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 37.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 37.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 36.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 36.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 36.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 36.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 36.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 36.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 36.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 35.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 35.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 35.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 35.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 35.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 35.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 35.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 34.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 34.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 34.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 34.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 33.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 33.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 32.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 32.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 32.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 32.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 31.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 31.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 31.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 31.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 31.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 30.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 30.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 30.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 28.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 28.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 27.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 27.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 26.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 26.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 26.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 25.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 25.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 25.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 24.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 24.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 23.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 23.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 23.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 22.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 22.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 20.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 20.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 19.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 19.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 19.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 18.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 18.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 18.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 18.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 18.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 17.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 17.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 17.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 17.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 16.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 16.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 16.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 16.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 16.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 16.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 15.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 15.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 15.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 15.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 13.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 13.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 12.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 12.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 12.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 11.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 10.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 4.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.6
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Brain - Putamen (basal ganglia)
Average nTPM: 37.0
Samples: 205

Max nTPM: 70.9
Min nTPM: 9.6
Std nTPM: 13.8
Median nTPM: 37.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 70.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 66.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 61.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 61.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 59.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 59.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 58.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 58.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 57.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 56.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 56.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 56.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 56.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 56.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 55.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 55.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 54.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 54.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 54.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 54.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 53.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 53.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 53.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 52.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 52.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 52.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 50.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 50.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 50.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 50.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 50.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 50.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 50.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 50.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 50.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 49.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 49.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 48.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 48.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 48.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 48.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 47.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 47.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 47.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 47.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 47.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 47.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 47.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 46.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 46.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 46.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 46.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 46.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 45.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 45.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 45.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 45.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 45.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 45.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 44.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 44.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 44.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 44.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 44.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 43.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 43.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 43.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 43.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 42.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 41.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 41.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 41.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 41.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 41.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 40.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 40.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 40.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 39.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 39.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 39.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 39.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 39.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 38.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 38.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 38.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 38.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 37.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 37.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 37.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 36.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 36.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 36.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 35.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 35.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 35.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 35.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 35.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 35.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 35.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 34.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 34.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 34.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 33.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 33.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 33.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 33.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 32.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 32.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 32.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 31.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 31.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 31.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 31.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 31.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 31.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 31.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 31.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 30.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 30.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 30.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 30.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 30.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 29.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 29.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 29.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 28.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 28.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 28.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 28.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 28.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 28.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 27.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 27.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 27.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 27.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 27.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 27.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 26.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 25.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 25.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 25.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 24.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 24.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 22.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 22.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 22.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 22.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 22.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 21.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 21.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 21.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 21.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 21.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 20.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 19.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 19.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 19.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 19.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 19.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 18.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 17.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 17.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 17.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 17.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 17.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 16.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 16.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 16.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 15.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 14.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 14.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 13.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 12.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 12.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 10.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 9.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

295.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 152.4
FF:10164-103B2 76 years, female 152.4
Nucleus accumbens
Scaled Tags Per Million: 295.3
FF:10037-101F1 23-56 years, mixed 295.3
Putamen
Scaled Tags Per Million: 191.4
FF:10176-103C5 60 years, female 191.4
Globus pallidus
Scaled Tags Per Million: 106.9
FF:10175-103C4 60 years, female 122.4
FF:10161-103A8 76 years, female 91.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.6
Pig sample Sample description nTPM
Caudate
nTPM: 101.3
Samples: 4

Max nTPM: 120.3
Min nTPM: 79.1
Sample A Female 79.1
Sample B Female 104.0
Sample C Male 120.3
Sample D Male 101.8
Putamen
nTPM: 102.6
Samples: 4

Max nTPM: 140.2
Min nTPM: 83.0
Sample A Female 83.0
Sample B Female 84.5
Sample C Male 102.6
Sample D Male 140.2
Septum
nTPM: 62.4
Samples: 4

Max nTPM: 78.3
Min nTPM: 41.5
Sample A Female 78.3
Sample B Female 68.7
Sample C Male 41.5
Sample D Male 61.1
Ventral pallidum
nTPM: 88.6
Samples: 4

Max nTPM: 109.4
Min nTPM: 78.4
Sample A Female 84.5
Sample B Female 78.4
Sample C Male 82.0
Sample D Male 109.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

91.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 91.1
Samples: 4

Max nTPM: 111.1
Min nTPM: 80.2
Sample A Male 88.7
Sample B Male 111.1
Sample C Female 80.2
Sample D Female 84.4
Septum
nTPM: 43.8
Samples: 4

Max nTPM: 45.9
Min nTPM: 38.1
Sample A Male 45.9
Sample B Male 38.1
Sample C Female 45.8
Sample D Female 45.3
Ventral forebrain
nTPM: 67.7
Samples: 4

Max nTPM: 77.9
Min nTPM: 56.6
Sample A Male 67.1
Sample B Male 56.6
Sample C Female 77.9
Sample D Female 69.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

19.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.5
69236658 Antisense, RP_050329_04_B05, Mouse strain C57BL/6J (56 days, male) 19.5
Pallidum
Expression energy: 13.9
69236658 Antisense, RP_050329_04_B05, Mouse strain C57BL/6J (56 days, male) 13.9

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