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PSMD8
HPA
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  • PSMD8
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PSMD8
Synonyms HIP6, HYPF, Nin1p, p31, Rpn12, S14
Gene descriptioni

Full gene name according to HGNC.

Proteasome 26S subunit, non-ATPase 8
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband q13.2
Chromosome location (bp) 38374563 - 38383850
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000099341 (version 109)
Entrez gene 5714
HGNC HGNC:9566
UniProt P48556 (UniProt - Evidence at protein level)
neXtProt NX_P48556
GeneCards PSMD8
Antibodypedia PSMD8 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the 26S proteasome, a multiprotein complex involved in the ATP-dependent degradation of ubiquitinated proteins. This complex plays a key role in the maintenance of protein homeostasis by removing misfolded or damaged proteins, which could impair cellular functions, and by removing proteins whose functions are no longer required. Therefore, the proteasome participates in numerous cellular processes, including cell cycle progression, apoptosis, or DNA damage repair.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

The 26S proteasome is a multicatalytic proteinase complex with a highly ordered structure composed of 2 complexes, a 20S core and a 19S regulator. The 20S core is composed of 4 rings of 28 non-identical subunits; 2 rings are composed of 7 alpha subunits and 2 rings are composed of 7 beta subunits. The 19S regulator is composed of a base, which contains 6 ATPase subunits and 2 non-ATPase subunits, and a lid, which contains up to 10 non-ATPase subunits. Proteasomes are distributed throughout eukaryotic cells at a high concentration and cleave peptides in an ATP/ubiquitin-dependent process in a non-lysosomal pathway. An essential function of a modified proteasome, the immunoproteasome, is the processing of class I MHC peptides. This gene encodes a non-ATPase subunit of the 19S regulator. A pseudogene has been identified on chromosome 1. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PSMD8-201
ENSP00000215071
ENST00000215071
P48556
[Direct mapping] 26S proteasome non-ATPase regulatory subunit 8
Show all
V9HW09
[Target identity:100%; Query identity:100%] 26S proteasome non-ATPase regulatory subunit 8
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005829 [cytosol]
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
GO:0008541 [proteasome regulatory particle, lid subcomplex]
GO:0022624 [proteasome accessory complex]
GO:0043161 [proteasome-mediated ubiquitin-dependent protein catabolic process]
Show all
350 aa
39.6 kDa
No 0
PSMD8-202
ENSP00000467146
ENST00000585598
K7ENY6
[Direct mapping] 26S proteasome non-ATPase regulatory subunit 8
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
129 aa
13.5 kDa
No 0
PSMD8-205
ENSP00000468445
ENST00000591250
K7ERW6
[Direct mapping] 26S proteasome non-ATPase regulatory subunit 8
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
67 aa
8 kDa
No 0
PSMD8-207
ENSP00000465107
ENST00000592035
K7EJC1
[Direct mapping] 26S proteasome non-ATPase regulatory subunit 8
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
172 aa
19.8 kDa
No 0
PSMD8-208
ENSP00000465287
ENST00000592561
K7EJR3
[Direct mapping] 26S proteasome non-ATPase regulatory subunit 8
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
250 aa
28.1 kDa
No 0
PSMD8-209
ENSP00000473312
ENST00000602911
R4GMR5
[Direct mapping] 26S proteasome non-ATPase regulatory subunit 8
Show all
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000502 [proteasome complex]
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
287 aa
32.6 kDa
No 0
PSMD8-210
ENSP00000514924
ENST00000700293
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
353 aa
39.8 kDa
No 0
PSMD8-211
ENSP00000514925
ENST00000700294
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
339 aa
38 kDa
No 0
PSMD8-212
ENSP00000514926
ENST00000700295
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005838 [proteasome regulatory particle]
GO:0006508 [proteolysis]
Show all
254 aa
28.7 kDa
No 0

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