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ATP5F1D
HPA
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  • SUMMARY

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  • ATP5F1D
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ATP5F1D
Synonyms ATP5D
Gene descriptioni

Full gene name according to HGNC.

ATP synthase F1 subunit delta
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Metabolic proteins
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband p13.3
Chromosome location (bp) 1241746 - 1244825
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000099624 (version 109)
Entrez gene 513
HGNC HGNC:837
UniProt P30049 (UniProt - Evidence at protein level)
neXtProt NX_P30049
GeneCards ATP5F1D
Antibodypedia ATP5F1D antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Mitochondrial membrane ATP synthase (F(1)F(0) ATP synthase or Complex V) produces ATP from ADP in the presence of a proton gradient across the membrane which is generated by electron transport complexes of the respiratory chain 1. F-type ATPases consist of two structural domains, F(1) - containing the extramembraneous catalytic core, and F(0) - containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP turnover in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. Part of the complex F(1) domain and of the central stalk which is part of the complex rotary element. Rotation of the central stalk against the surrounding alpha(3)beta(3) subunits leads to hydrolysis of ATP in three separate catalytic sites on the beta subunits 2.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

ATP synthesis, Hydrogen ion transport, Ion transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a subunit of mitochondrial ATP synthase. Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. ATP synthase is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, comprising the proton channel. The catalytic portion of mitochondrial ATP synthase consists of 5 different subunits (alpha, beta, gamma, delta, and epsilon) assembled with a stoichiometry of 3 alpha, 3 beta, and a single representative of the other 3. The proton channel consists of three main subunits (a, b, c). This gene encodes the delta subunit of the catalytic core. Alternatively spliced transcript variants encoding the same isoform have been identified. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ATP5F1D-201
ENSP00000215375
ENST00000215375
P30049
[Direct mapping] ATP synthase subunit delta, mitochondrial
Show all
Metabolic proteins
Transporters
   Primary Active Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000275 [mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005753 [mitochondrial proton-transporting ATP synthase complex]
GO:0005759 [mitochondrial matrix]
GO:0006754 [ATP biosynthetic process]
GO:0006811 [ion transport]
GO:0009060 [aerobic respiration]
GO:0015986 [proton motive force-driven ATP synthesis]
GO:0016020 [membrane]
GO:0033615 [mitochondrial proton-transporting ATP synthase complex assembly]
GO:0042776 [proton motive force-driven mitochondrial ATP synthesis]
GO:0043531 [ADP binding]
GO:0045261 [proton-transporting ATP synthase complex, catalytic core F(1)]
GO:0046688 [response to copper ion]
GO:0046933 [proton-transporting ATP synthase activity, rotational mechanism]
GO:1902600 [proton transmembrane transport]
Show all
168 aa
17.5 kDa
No 0
ATP5F1D-202
ENSP00000378995
ENST00000395633
P30049
[Direct mapping] ATP synthase subunit delta, mitochondrial
Show all
Metabolic proteins
Transporters
   Primary Active Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000275 [mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005753 [mitochondrial proton-transporting ATP synthase complex]
GO:0005759 [mitochondrial matrix]
GO:0006754 [ATP biosynthetic process]
GO:0006811 [ion transport]
GO:0009060 [aerobic respiration]
GO:0015986 [proton motive force-driven ATP synthesis]
GO:0016020 [membrane]
GO:0033615 [mitochondrial proton-transporting ATP synthase complex assembly]
GO:0042776 [proton motive force-driven mitochondrial ATP synthesis]
GO:0043531 [ADP binding]
GO:0045261 [proton-transporting ATP synthase complex, catalytic core F(1)]
GO:0046688 [response to copper ion]
GO:0046933 [proton-transporting ATP synthase activity, rotational mechanism]
GO:1902600 [proton transmembrane transport]
Show all
168 aa
17.5 kDa
No 0
ATP5F1D-206
ENSP00000477964
ENST00000591249
A0A087WTL3
[Direct mapping] ATP synthase F1 subunit delta
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005743 [mitochondrial inner membrane]
GO:0006811 [ion transport]
GO:0015986 [proton motive force-driven ATP synthesis]
GO:0016020 [membrane]
GO:0045261 [proton-transporting ATP synthase complex, catalytic core F(1)]
GO:0046933 [proton-transporting ATP synthase activity, rotational mechanism]
Show all
99 aa
10.9 kDa
No 0
ATP5F1D-207
ENSP00000464863
ENST00000591660
P30049
[Direct mapping] ATP synthase subunit delta, mitochondrial
Show all
Metabolic proteins
Transporters
   Primary Active Transporters
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Mitochondrial diseases
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000275 [mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005739 [mitochondrion]
GO:0005743 [mitochondrial inner membrane]
GO:0005753 [mitochondrial proton-transporting ATP synthase complex]
GO:0005759 [mitochondrial matrix]
GO:0006754 [ATP biosynthetic process]
GO:0006811 [ion transport]
GO:0009060 [aerobic respiration]
GO:0015986 [proton motive force-driven ATP synthesis]
GO:0016020 [membrane]
GO:0033615 [mitochondrial proton-transporting ATP synthase complex assembly]
GO:0042776 [proton motive force-driven mitochondrial ATP synthesis]
GO:0043531 [ADP binding]
GO:0045261 [proton-transporting ATP synthase complex, catalytic core F(1)]
GO:0046688 [response to copper ion]
GO:0046933 [proton-transporting ATP synthase activity, rotational mechanism]
GO:1902600 [proton transmembrane transport]
Show all
168 aa
17.5 kDa
No 0

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