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ATP5F1D
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  • ATP5F1D
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:200.1 nTPM
FANTOM5:266.3 Scaled Tags Per Million
Pig:309.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002865
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

200.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 200.1
Samples: 246

Max nTPM: 461.6
Min nTPM: 74.7
Std nTPM: 64.5
Median nTPM: 187.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 461.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 404.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 397.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 392.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 384.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 365.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 364.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 347.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 342.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 338.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 332.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 311.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 306.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 305.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 305.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 302.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 296.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 295.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 292.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 291.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 290.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 287.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 284.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 283.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 281.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 280.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 280.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 278.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 277.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 276.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 273.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 270.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 268.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 268.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 265.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 265.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 261.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 261.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 260.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 258.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 258.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 257.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 256.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 255.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 253.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 253.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 252.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 252.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 252.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 250.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 250.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 247.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 244.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 244.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 240.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 239.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 239.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 238.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 237.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 236.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 236.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 236.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 236.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 235.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 235.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 234.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 233.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 231.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 231.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 230.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 229.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 229.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 229.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 229.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 228.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 227.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 226.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 225.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 225.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 224.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 223.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 222.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 220.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 220.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 220.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 218.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 218.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 217.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 217.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 214.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 212.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 210.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 209.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 209.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 208.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 206.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 206.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 206.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 204.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 198.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 197.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 197.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 196.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 196.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 195.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 194.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 194.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 194.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 194.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 193.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 192.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 192.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 192.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 191.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 191.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 191.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 190.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 189.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 188.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 188.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 188.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 187.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 186.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 186.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 186.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 186.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 185.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 185.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 185.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 185.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 184.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 183.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 183.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 182.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 182.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 181.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 181.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 180.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 179.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 179.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 179.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 179.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 179.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 178.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 177.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 177.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 177.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 176.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 176.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 176.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 176.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 175.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 175.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 175.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 175.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 174.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 174.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 174.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 173.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 173.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 173.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 170.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 169.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 169.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 169.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 168.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 168.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 168.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 167.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 166.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 166.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 166.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 165.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 164.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 164.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 164.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 164.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 163.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 162.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 162.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 161.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 161.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 159.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 159.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 157.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 157.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 157.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 157.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 155.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 154.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 154.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 154.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 153.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 152.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 151.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 151.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 151.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 150.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 150.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 149.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 148.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 148.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 147.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 147.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 146.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 146.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 142.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 142.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 140.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 138.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 137.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 137.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 136.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 136.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 135.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 133.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 131.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 128.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 127.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 122.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 120.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 120.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 120.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 119.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 117.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 106.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 106.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 102.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 102.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 98.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 92.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 91.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 88.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 86.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 82.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 80.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 74.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

266.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 266.3
FF:10164-103B2 76 years, female 266.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

309.2
Pig sample Sample description nTPM
Caudate
nTPM: 309.2
Samples: 4

Max nTPM: 366.0
Min nTPM: 250.8
Sample A Female 250.8
Sample B Female 344.4
Sample C Male 366.0
Sample D Male 275.4

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