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MARCHF2
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  • MARCHF2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:88.2 nTPM
HPA Brain:117.6 nTPM
GTEx:88.2 nTPM
FANTOM5:55.6 Scaled Tags Per Million
Pig:42.5 nTPM
Mouse:105.4 nTPM
Allen mouse:1.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014063
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 81.9
2481 Female, age 94, left hemisphere 93.3
2290 Female, age 72, unknown 91.8
1781 Male, age 74, unknown 82.8
1857 Female, age 85, left hemisphere 81.9
2846 Female, age 79, unknown 79.7
1854 Male, age 80, left hemisphere 76.5
2288 Male, age 75, left hemisphere 74.8
2289 Male, age 61, right hemisphere 74.6
Globus pallidus, externus
nTPM: 117.6
2567 Female, age 72, unknown 143.3
2772 Female, age 79, unknown 137.2
1996 Male, age 80, right hemisphere 112.2
2646 Male, age 61, right hemisphere 106.0
2395 Male, age 75, both hemispheres 89.2
Globus pallidus, internus
nTPM: 112.9
1818 Male, age 74, unknown 132.0
2483 Female, age 94, right hemisphere 129.3
2037 Male, age 80, right hemisphere 120.3
2566 Female, age 72, unknown 118.0
2111 Female, age 85, right hemisphere 101.3
2287 Male, age 75, right hemisphere 95.4
2778 Female, age 91, both hemispheres 94.2
Nucleus accumbens
nTPM: 72.4
1806 Female, age 85, left hemisphere 79.0
1783 Male, age 74, unknown 76.8
1856 Female, age 91, right hemisphere 74.5
2286 Male, age 75, left hemisphere 72.7
2732 Male, age 80, right hemisphere 72.0
2391 Female, age 94, left hemisphere 71.4
2698 Female, age 72, unknown 66.7
2824 Male, age 61, right hemisphere 65.9
Nucleus basalis of Meynert
nTPM: 92.1
2569 Male, age 61, both hemispheres 120.2
2484 Female, age 94, left hemisphere 85.9
2393 Male, age 80, right hemisphere 81.5
2821 Male, age 75, both hemispheres 80.6
Nucleus of the diagonal band
nTPM: 74.2
2029 Male, age 61, right hemisphere 83.4
2775 Male, age 80, right hemisphere 79.1
2195 Female, age 85, both hemispheres 74.1
1812 Female, age 91, both hemispheres 72.0
1979 Male, age 74, unknown 62.6
Putamen
nTPM: 92.7
2647 Male, age 75, left hemisphere 116.9
2489 Female, age 72, unknown 111.8
2482 Female, age 94, left hemisphere 95.9
2466 Female, age 79, unknown 87.9
1937 Female, age 91, right hemisphere 83.6
1829 Male, age 74, unknown 80.9
1838 Male, age 80, right hemisphere 71.6
Septal nuclei
nTPM: 75.8
2394 Male, age 61, left hemisphere 88.1
1960 Male, age 74, unknown 86.6
2059 Female, age 85, both hemispheres 83.0
2031 Female, age 72, unknown 75.3
2199 Male, age 80, right hemisphere 70.9
2009 Female, age 91, both hemispheres 63.8
2629 Female, age 94, right hemisphere 62.7
Stria terminalis, bed nucleus
nTPM: 75.4
1974 Female, age 91, both hemispheres 80.6
2201 Male, age 74, unknown 74.6
2486 Female, age 94, both hemispheres 71.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

88.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 75.8
Samples: 246

Max nTPM: 161.5
Min nTPM: 34.0
Std nTPM: 20.6
Median nTPM: 73.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 161.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 137.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 131.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 131.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 129.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 125.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 117.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 116.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 115.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 115.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 115.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 114.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 114.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 113.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 111.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 109.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 109.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 108.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 108.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 108.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 108.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 105.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 105.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 105.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 105.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 102.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 102.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 101.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 100.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 99.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 99.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 99.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 98.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 98.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 98.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 98.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 98.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 97.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 96.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 96.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 95.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 94.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 94.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 94.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 93.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 93.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 92.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 92.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 92.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 91.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 91.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 90.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 90.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 90.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 89.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 88.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 88.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 88.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 87.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 87.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 86.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 86.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 86.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 86.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 86.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 85.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 85.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 85.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 84.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 84.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 84.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 84.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 83.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 83.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 83.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 83.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 82.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 82.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 82.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 82.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 81.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 81.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 81.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 81.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 80.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 80.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 80.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 80.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 80.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 80.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 79.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 79.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 79.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 78.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 78.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 78.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 78.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 77.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 77.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 77.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 77.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 76.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 76.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 76.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 76.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 75.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 75.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 75.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 75.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 75.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 74.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 74.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 74.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 73.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 73.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 73.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 72.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 72.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 72.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 72.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 71.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 71.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 71.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 71.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 71.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 70.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 70.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 70.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 69.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 69.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 69.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 68.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 68.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 68.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 68.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 68.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 68.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 68.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 67.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 67.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 67.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 66.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 66.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 66.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 65.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 65.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 65.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 65.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 65.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 64.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 64.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 64.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 64.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 64.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 64.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 64.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 63.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 62.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 62.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 61.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 61.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 61.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 61.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 61.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 61.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 61.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 60.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 60.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 60.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 60.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 60.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 59.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 59.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 58.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 58.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 58.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 57.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 57.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 56.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 56.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 56.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 55.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 55.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 55.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 55.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 55.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 54.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 54.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 54.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 54.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 53.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 53.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 53.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 51.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 51.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 49.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 49.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 49.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 48.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 47.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 47.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 45.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 45.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 43.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 43.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 41.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 41.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 37.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 35.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 34.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 71.7
Samples: 246

Max nTPM: 174.5
Min nTPM: 17.1
Std nTPM: 24.4
Median nTPM: 67.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 174.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 155.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 144.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 140.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 139.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 138.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 137.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 131.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 129.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 127.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 124.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 121.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 120.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 117.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 115.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 113.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 112.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 112.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 112.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 111.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 110.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 110.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 109.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 108.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 108.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 108.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 107.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 104.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 104.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 99.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 98.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 98.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 98.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 97.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 96.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 96.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 96.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 96.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 94.9
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 94.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 93.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 92.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 92.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 91.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 91.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 90.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 88.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 88.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 86.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 86.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 85.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 85.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 84.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 84.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 84.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 84.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 83.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 83.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 82.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 82.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 82.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 81.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 81.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 80.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 80.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 79.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 79.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 79.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 79.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 78.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 78.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 77.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 77.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 77.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 77.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 77.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 76.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 75.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 75.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 74.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 74.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 74.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 74.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 74.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 73.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 72.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 72.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 72.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 72.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 72.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 72.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 72.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 72.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 71.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 71.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 71.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 71.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 71.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 71.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 71.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 70.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 70.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 70.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 70.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 70.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 70.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 69.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 69.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 69.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 69.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 69.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 69.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 69.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 69.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 69.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 69.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 69.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 68.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 68.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 67.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 67.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 67.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 66.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 66.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 66.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 66.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 65.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 65.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 65.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 65.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 65.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 65.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 65.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 65.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 65.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 64.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 64.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 64.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 64.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 63.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 62.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 62.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 62.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 62.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 62.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 62.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 62.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 61.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 61.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 61.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 61.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 61.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 60.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 60.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 60.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 60.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 60.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 60.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 59.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 59.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 59.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 59.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 59.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 59.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 58.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 58.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 58.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 58.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 58.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 57.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 57.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 57.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 56.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 56.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 56.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 56.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 56.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 55.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 54.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 54.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 53.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 53.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 53.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 53.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 53.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 52.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 52.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 52.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 52.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 51.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 51.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 50.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 50.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 50.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 50.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 50.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 49.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 49.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 48.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 48.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 48.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 47.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 47.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 47.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 47.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 47.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 47.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 46.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 46.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 46.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 46.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 45.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 45.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 45.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 44.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 44.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 43.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 42.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 42.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 40.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 40.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 39.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 39.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 35.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 34.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 34.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 32.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 30.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 30.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 27.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 17.1
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Brain - Putamen (basal ganglia)
Average nTPM: 88.2
Samples: 205

Max nTPM: 171.4
Min nTPM: 35.8
Std nTPM: 21.4
Median nTPM: 85.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 171.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 148.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 136.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 136.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 135.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 135.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 128.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 126.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 125.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 125.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 124.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 123.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 123.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 122.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 121.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 121.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 121.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 120.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 120.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 118.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 117.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 117.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 115.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 114.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 114.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 113.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 113.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 113.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 113.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 112.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 112.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 110.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 110.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 109.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 109.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 109.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 108.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 108.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 108.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 108.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 108.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 107.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 105.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 105.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 105.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 104.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 104.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 103.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 103.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 103.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 102.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 102.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 102.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 101.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 101.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 100.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 100.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 98.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 97.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 97.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 97.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 96.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 96.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 96.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 96.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 95.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 95.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 95.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 94.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 94.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 94.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 94.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 94.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 93.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 92.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 92.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 92.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 92.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 92.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 91.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 90.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 90.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 90.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 90.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 89.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 89.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 89.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 89.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 88.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 88.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 88.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 87.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 87.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 86.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 86.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 86.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 85.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 85.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 85.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 85.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 85.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 85.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 84.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 84.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 84.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 84.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 83.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 83.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 83.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 83.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 83.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 83.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 83.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 82.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 81.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 81.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 81.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 81.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 81.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 80.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 80.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 80.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 80.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 80.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 80.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 79.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 79.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 78.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 78.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 78.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 77.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 77.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 77.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 77.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 77.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 76.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 76.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 76.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 76.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 76.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 75.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 75.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 75.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 75.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 75.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 74.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 74.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 74.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 73.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 73.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 73.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 73.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 73.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 73.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 72.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 72.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 71.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 71.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 70.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 70.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 70.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 69.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 69.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 68.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 68.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 68.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 68.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 68.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 66.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 66.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 66.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 65.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 64.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 63.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 63.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 62.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 62.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 62.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 62.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 61.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 61.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 59.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 59.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 59.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 58.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 57.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 57.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 56.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 55.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 55.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 52.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 49.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 48.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 45.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

55.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 48.3
FF:10164-103B2 76 years, female 48.3
Nucleus accumbens
Scaled Tags Per Million: 53.5
FF:10037-101F1 23-56 years, mixed 53.5
Putamen
Scaled Tags Per Million: 52.6
FF:10176-103C5 60 years, female 52.6
Globus pallidus
Scaled Tags Per Million: 55.6
FF:10175-103C4 60 years, female 56.5
FF:10161-103A8 76 years, female 54.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.5
Pig sample Sample description nTPM
Caudate
nTPM: 31.6
Samples: 4

Max nTPM: 40.7
Min nTPM: 22.8
Sample A Female 22.8
Sample B Female 34.1
Sample C Male 40.7
Sample D Male 28.8
Putamen
nTPM: 42.6
Samples: 4

Max nTPM: 61.9
Min nTPM: 32.9
Sample A Female 32.9
Sample B Female 37.3
Sample C Male 61.9
Sample D Male 38.1
Septum
nTPM: 27.3
Samples: 4

Max nTPM: 32.7
Min nTPM: 23.6
Sample A Female 26.3
Sample B Female 26.6
Sample C Male 32.7
Sample D Male 23.6
Ventral pallidum
nTPM: 30.5
Samples: 4

Max nTPM: 41.6
Min nTPM: 22.0
Sample A Female 22.0
Sample B Female 35.4
Sample C Male 41.6
Sample D Male 23.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 105.4
Samples: 4

Max nTPM: 109.6
Min nTPM: 101.3
Sample A Male 106.5
Sample B Male 109.6
Sample C Female 101.3
Sample D Female 104.0
Septum
nTPM: 75.6
Samples: 4

Max nTPM: 78.9
Min nTPM: 71.6
Sample A Male 73.1
Sample B Male 78.9
Sample C Female 78.8
Sample D Female 71.6
Ventral forebrain
nTPM: 93.4
Samples: 4

Max nTPM: 108.8
Min nTPM: 81.7
Sample A Male 90.3
Sample B Male 92.9
Sample C Female 108.8
Sample D Female 81.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.6
68076533 Antisense, RP_040923_02_E04, Mouse strain C57BL/6J (56 days, male) 0.6
Pallidum
Expression energy: 1.0
68076533 Antisense, RP_040923_02_E04, Mouse strain C57BL/6J (56 days, male) 1.0

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