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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:171.6 nTPM
HPA Brain:167.5 nTPM
GTEx:171.6 nTPM
FANTOM5:381.6 Scaled Tags Per Million
Pig:186.4 nTPM
Mouse:703.3 nTPM
Allen mouse:21.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029780Antibody HPA056488
Glial cells Not detectedMedium
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 120.7
2288 Male, age 75, left hemisphere 156.5
2481 Female, age 94, left hemisphere 133.3
2290 Female, age 72, unknown 121.7
1781 Male, age 74, unknown 119.6
2289 Male, age 61, right hemisphere 113.2
2846 Female, age 79, unknown 111.6
1854 Male, age 80, left hemisphere 107.6
1857 Female, age 85, left hemisphere 102.3
Globus pallidus, externus
nTPM: 144.6
1996 Male, age 80, right hemisphere 203.7
2772 Female, age 79, unknown 192.0
2395 Male, age 75, both hemispheres 134.7
2646 Male, age 61, right hemisphere 131.5
2567 Female, age 72, unknown 60.9
Globus pallidus, internus
nTPM: 167.5
2287 Male, age 75, right hemisphere 237.3
2778 Female, age 91, both hemispheres 196.2
2111 Female, age 85, right hemisphere 169.0
2037 Male, age 80, right hemisphere 164.7
1818 Male, age 74, unknown 157.2
2483 Female, age 94, right hemisphere 136.8
2566 Female, age 72, unknown 111.1
Nucleus accumbens
nTPM: 127.0
2286 Male, age 75, left hemisphere 159.7
2698 Female, age 72, unknown 147.7
2391 Female, age 94, left hemisphere 141.4
1806 Female, age 85, left hemisphere 120.9
1856 Female, age 91, right hemisphere 116.6
1783 Male, age 74, unknown 114.3
2824 Male, age 61, right hemisphere 111.4
2732 Male, age 80, right hemisphere 104.0
Nucleus basalis of Meynert
nTPM: 109.0
2821 Male, age 75, both hemispheres 128.5
2569 Male, age 61, both hemispheres 114.3
2484 Female, age 94, left hemisphere 99.8
2393 Male, age 80, right hemisphere 93.4
Nucleus of the diagonal band
nTPM: 117.2
2195 Female, age 85, both hemispheres 126.4
1812 Female, age 91, both hemispheres 124.6
2029 Male, age 61, right hemisphere 115.4
2775 Male, age 80, right hemisphere 111.0
1979 Male, age 74, unknown 108.3
Putamen
nTPM: 104.9
2482 Female, age 94, left hemisphere 141.9
1937 Female, age 91, right hemisphere 116.7
1829 Male, age 74, unknown 106.3
1838 Male, age 80, right hemisphere 100.0
2466 Female, age 79, unknown 99.0
2489 Female, age 72, unknown 85.8
2647 Male, age 75, left hemisphere 84.5
Septal nuclei
nTPM: 118.5
2031 Female, age 72, unknown 136.2
2629 Female, age 94, right hemisphere 134.9
2059 Female, age 85, both hemispheres 122.3
1960 Male, age 74, unknown 119.7
2009 Female, age 91, both hemispheres 107.2
2394 Male, age 61, left hemisphere 107.1
2199 Male, age 80, right hemisphere 102.0
Stria terminalis, bed nucleus
nTPM: 113.8
2201 Male, age 74, unknown 124.2
1974 Female, age 91, both hemispheres 113.7
2486 Female, age 94, both hemispheres 103.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 138.7
Samples: 246

Max nTPM: 271.6
Min nTPM: 45.6
Std nTPM: 35.9
Median nTPM: 131.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 271.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 268.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 256.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 253.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 242.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 225.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 216.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 214.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 213.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 209.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 203.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 203.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 202.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 200.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 199.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 198.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 197.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 197.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 195.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 195.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 190.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 189.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 189.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 188.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 188.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 186.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 186.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 185.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 185.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 182.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 180.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 180.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 180.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 180.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 178.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 178.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 177.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 173.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 172.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 172.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 172.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 170.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 170.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 170.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 169.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 169.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 167.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 167.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 166.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 166.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 165.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 165.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 165.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 164.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 164.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 162.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 159.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 159.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 159.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 159.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 158.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 157.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 155.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 155.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 154.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 154.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 154.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 154.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 154.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 154.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 153.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 153.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 153.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 152.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 152.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 152.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 152.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 151.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 151.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 150.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 150.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 150.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 150.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 149.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 149.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 149.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 149.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 148.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 147.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 146.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 145.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 145.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 144.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 144.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 144.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 144.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 143.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 142.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 142.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 141.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 141.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 141.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 140.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 139.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 139.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 138.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 137.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 137.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 136.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 136.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 136.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 135.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 135.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 134.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 134.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 134.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 133.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 133.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 132.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 132.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 131.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 131.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 131.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 130.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 130.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 130.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 129.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 129.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 129.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 128.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 128.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 128.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 128.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 127.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 127.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 126.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 126.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 126.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 125.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 125.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 124.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 124.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 124.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 124.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 123.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 123.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 123.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 121.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 121.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 121.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 121.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 120.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 120.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 120.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 120.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 119.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 119.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 119.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 119.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 118.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 117.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 117.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 117.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 117.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 117.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 117.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 116.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 116.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 116.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 116.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 116.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 115.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 115.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 115.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 115.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 115.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 115.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 115.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 114.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 114.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 114.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 113.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 113.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 112.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 112.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 111.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 111.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 111.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 111.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 111.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 111.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 111.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 110.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 110.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 110.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 109.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 108.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 107.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 107.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 107.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 106.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 106.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 106.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 106.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 106.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 105.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 105.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 104.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 104.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 104.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 104.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 103.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 103.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 102.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 102.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 102.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 101.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 101.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 101.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 101.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 100.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 99.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 99.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 99.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 98.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 98.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 97.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 96.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 96.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 94.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 92.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 90.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 89.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 85.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 84.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 84.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 81.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 80.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 74.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 45.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 157.9
Samples: 246

Max nTPM: 514.9
Min nTPM: 74.7
Std nTPM: 55.0
Median nTPM: 146.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 514.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 430.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 381.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 353.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 319.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 309.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 294.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 293.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 278.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 272.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 264.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 254.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 253.1
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 248.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 248.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 244.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 244.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 241.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 241.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 236.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 232.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 228.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 222.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 219.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 215.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 213.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 213.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 212.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 208.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 206.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 206.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 203.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 202.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 200.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 199.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 196.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 196.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 196.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 195.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 195.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 194.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 194.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 193.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 191.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 190.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 190.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 189.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 188.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 187.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 185.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 184.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 183.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 182.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 182.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 181.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 181.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 180.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 178.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 178.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 177.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 176.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 176.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 176.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 174.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 173.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 172.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 171.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 169.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 168.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 167.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 167.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 167.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 165.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 164.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 164.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 163.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 163.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 162.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 162.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 162.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 162.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 162.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 161.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 161.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 160.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 160.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 160.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 160.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 159.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 159.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 159.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 159.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 159.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 159.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 157.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 157.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 157.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 156.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 156.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 155.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 154.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 154.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 153.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 153.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 153.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 153.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 152.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 152.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 152.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 151.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 150.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 150.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 150.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 150.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 150.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 150.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 149.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 149.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 148.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 147.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 146.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 146.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 146.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 146.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 146.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 145.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 145.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 144.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 144.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 144.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 144.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 144.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 143.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 142.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 141.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 140.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 140.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 140.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 140.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 138.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 138.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 138.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 138.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 137.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 137.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 137.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 137.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 136.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 135.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 135.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 134.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 134.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 134.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 134.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 132.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 132.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 132.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 132.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 131.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 131.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 131.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 131.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 130.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 130.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 130.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 129.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 129.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 129.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 129.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 128.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 128.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 128.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 128.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 127.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 127.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 127.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 127.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 126.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 125.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 125.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 125.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 124.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 124.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 123.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 123.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 122.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 122.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 122.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 121.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 121.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 121.3
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 121.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 121.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 120.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 119.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 118.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 118.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 117.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 117.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 117.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 116.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 115.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 115.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 115.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 115.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 115.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 115.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 115.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 115.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 114.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 114.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 113.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 113.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 113.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 113.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 112.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 111.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 111.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 111.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 110.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 109.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 109.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 109.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 109.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 108.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 107.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 107.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 106.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 106.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 106.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 105.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 105.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 104.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 104.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 101.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 99.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 97.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 94.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 91.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 91.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 91.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 90.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 89.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 83.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 80.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 74.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 171.6
Samples: 205

Max nTPM: 351.9
Min nTPM: 80.9
Std nTPM: 42.4
Median nTPM: 166.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 351.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 303.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 299.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 297.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 293.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 282.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 277.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 276.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 269.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 243.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 243.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 242.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 238.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 235.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 232.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 232.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 231.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 227.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 225.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 223.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 223.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 222.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 222.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 221.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 220.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 220.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 219.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 219.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 219.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 217.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 217.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 216.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 212.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 212.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 208.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 207.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 206.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 205.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 203.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 203.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 203.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 201.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 201.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 199.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 199.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 199.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 199.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 198.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 196.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 195.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 194.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 193.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 193.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 187.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 187.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 186.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 186.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 184.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 183.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 183.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 183.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 183.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 182.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 181.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 181.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 180.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 178.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 178.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 178.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 177.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 177.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 176.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 175.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 175.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 175.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 175.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 174.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 174.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 173.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 173.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 173.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 172.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 172.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 172.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 172.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 171.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 171.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 171.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 171.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 171.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 170.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 169.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 169.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 169.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 169.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 169.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 168.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 168.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 168.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 167.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 166.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 166.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 166.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 166.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 165.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 164.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 164.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 163.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 163.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 162.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 162.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 162.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 161.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 161.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 160.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 160.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 160.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 160.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 160.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 159.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 159.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 158.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 157.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 157.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 156.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 156.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 155.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 155.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 155.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 154.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 154.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 153.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 153.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 153.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 152.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 152.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 152.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 151.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 150.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 150.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 149.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 148.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 147.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 147.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 147.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 146.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 146.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 145.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 145.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 143.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 143.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 143.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 143.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 143.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 142.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 142.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 141.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 141.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 140.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 140.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 138.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 138.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 137.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 137.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 137.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 137.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 137.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 136.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 135.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 134.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 133.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 133.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 133.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 131.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 131.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 130.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 130.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 129.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 129.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 128.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 127.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 126.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 126.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 126.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 125.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 124.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 124.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 123.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 121.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 120.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 119.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 118.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 117.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 115.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 115.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 114.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 113.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 113.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 112.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 111.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 107.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 101.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 97.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 97.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 80.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

381.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 281.3
FF:10164-103B2 76 years, female 281.3
Nucleus accumbens
Scaled Tags Per Million: 381.6
FF:10037-101F1 23-56 years, mixed 381.6
Putamen
Scaled Tags Per Million: 311.3
FF:10176-103C5 60 years, female 311.3
Globus pallidus
Scaled Tags Per Million: 281.5
FF:10161-103A8 76 years, female 306.4
FF:10175-103C4 60 years, female 256.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

186.4
Pig sample Sample description nTPM
Caudate
nTPM: 153.4
Samples: 4

Max nTPM: 198.8
Min nTPM: 118.9
Sample A Female 118.9
Sample B Female 155.0
Sample C Male 198.8
Sample D Male 140.9
Putamen
nTPM: 186.5
Samples: 4

Max nTPM: 227.0
Min nTPM: 133.9
Sample A Female 174.2
Sample B Female 133.9
Sample C Male 227.0
Sample D Male 210.7
Septum
nTPM: 146.1
Samples: 4

Max nTPM: 177.9
Min nTPM: 121.3
Sample A Female 121.3
Sample B Female 127.8
Sample C Male 177.9
Sample D Male 157.4
Ventral pallidum
nTPM: 159.2
Samples: 4

Max nTPM: 207.6
Min nTPM: 109.3
Sample A Female 109.3
Sample B Female 164.8
Sample C Male 207.6
Sample D Male 155.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

703.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 509.0
Samples: 4

Max nTPM: 544.6
Min nTPM: 488.2
Sample A Male 488.2
Sample B Male 493.1
Sample C Female 509.9
Sample D Female 544.6
Septum
nTPM: 703.4
Samples: 4

Max nTPM: 725.9
Min nTPM: 668.5
Sample A Male 698.9
Sample B Male 720.1
Sample C Female 725.9
Sample D Female 668.5
Ventral forebrain
nTPM: 605.6
Samples: 4

Max nTPM: 667.9
Min nTPM: 513.2
Sample A Male 513.2
Sample B Male 648.8
Sample C Female 667.9
Sample D Female 592.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

21.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 19.8
75694901 Antisense, RP_060518_04_A09, Mouse strain C57BL/6J (56 days, male) 20.6
544902 Antisense, RP_040420_01_H11, Mouse strain C57BL/6J (56 days, male) 19.1
Pallidum
Expression energy: 21.7
544902 Antisense, RP_040420_01_H11, Mouse strain C57BL/6J (56 days, male) 23.2
75694901 Antisense, RP_060518_04_A09, Mouse strain C57BL/6J (56 days, male) 20.3

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