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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:246.5 nTPM
HPA Brain:218.4 nTPM
GTEx:246.5 nTPM
FANTOM5:159.5 Scaled Tags Per Million
Pig:122.6 nTPM
Mouse:126.7 nTPM
Allen mouse:8.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA041713Antibody HPA049578
Glial cells LowNot detected
Neuronal cells MediumNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

218.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 218.4
2290 Female, age 72, unknown 286.6
2289 Male, age 61, right hemisphere 260.3
2846 Female, age 79, unknown 226.4
1781 Male, age 74, unknown 221.0
1857 Female, age 85, left hemisphere 214.4
1854 Male, age 80, left hemisphere 192.8
2481 Female, age 94, left hemisphere 181.3
2288 Male, age 75, left hemisphere 164.6
Globus pallidus, externus
nTPM: 135.7
2646 Male, age 61, right hemisphere 191.3
2567 Female, age 72, unknown 148.9
1996 Male, age 80, right hemisphere 125.7
2772 Female, age 79, unknown 114.5
2395 Male, age 75, both hemispheres 98.0
Globus pallidus, internus
nTPM: 117.7
2483 Female, age 94, right hemisphere 187.4
2566 Female, age 72, unknown 129.3
2287 Male, age 75, right hemisphere 114.9
1818 Male, age 74, unknown 111.4
2037 Male, age 80, right hemisphere 101.5
2111 Female, age 85, right hemisphere 93.3
2778 Female, age 91, both hemispheres 85.7
Nucleus accumbens
nTPM: 187.1
1783 Male, age 74, unknown 248.8
2824 Male, age 61, right hemisphere 219.4
2698 Female, age 72, unknown 206.9
1856 Female, age 91, right hemisphere 206.6
1806 Female, age 85, left hemisphere 202.7
2286 Male, age 75, left hemisphere 161.4
2732 Male, age 80, right hemisphere 136.0
2391 Female, age 94, left hemisphere 114.6
Nucleus basalis of Meynert
nTPM: 187.3
2569 Male, age 61, both hemispheres 262.2
2484 Female, age 94, left hemisphere 185.5
2393 Male, age 80, right hemisphere 164.2
2821 Male, age 75, both hemispheres 137.2
Nucleus of the diagonal band
nTPM: 208.5
2195 Female, age 85, both hemispheres 245.1
2775 Male, age 80, right hemisphere 224.2
2029 Male, age 61, right hemisphere 214.3
1812 Female, age 91, both hemispheres 191.6
1979 Male, age 74, unknown 167.4
Putamen
nTPM: 208.7
2489 Female, age 72, unknown 246.8
2647 Male, age 75, left hemisphere 236.4
1829 Male, age 74, unknown 218.9
1838 Male, age 80, right hemisphere 216.8
2466 Female, age 79, unknown 201.1
1937 Female, age 91, right hemisphere 177.1
2482 Female, age 94, left hemisphere 163.7
Septal nuclei
nTPM: 199.3
1960 Male, age 74, unknown 259.6
2059 Female, age 85, both hemispheres 245.0
2031 Female, age 72, unknown 226.7
2629 Female, age 94, right hemisphere 201.3
2009 Female, age 91, both hemispheres 176.0
2394 Male, age 61, left hemisphere 156.2
2199 Male, age 80, right hemisphere 129.9
Stria terminalis, bed nucleus
nTPM: 162.9
2486 Female, age 94, both hemispheres 175.0
1974 Female, age 91, both hemispheres 172.2
2201 Male, age 74, unknown 141.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

246.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 217.0
Samples: 246

Max nTPM: 394.5
Min nTPM: 73.6
Std nTPM: 53.8
Median nTPM: 213.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 394.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 389.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 382.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 380.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 366.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 351.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 343.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 341.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 319.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 313.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 312.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 309.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 309.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 305.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 304.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 300.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 300.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 297.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 296.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 295.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 294.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 293.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 292.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 291.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 290.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 290.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 289.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 281.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 276.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 276.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 276.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 273.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 272.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 272.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 272.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 271.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 270.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 268.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 267.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 266.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 266.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 264.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 262.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 262.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 261.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 261.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 261.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 260.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 259.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 256.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 254.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 253.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 253.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 252.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 249.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 248.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 248.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 247.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 247.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 245.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 245.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 245.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 244.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 244.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 242.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 242.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 241.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 241.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 240.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 240.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 240.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 240.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 240.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 239.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 239.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 238.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 238.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 237.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 237.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 236.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 235.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 234.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 234.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 233.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 232.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 231.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 230.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 228.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 228.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 228.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 228.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 227.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 227.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 227.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 227.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 227.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 226.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 226.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 226.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 224.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 224.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 223.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 223.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 222.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 222.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 222.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 221.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 221.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 221.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 221.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 221.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 219.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 219.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 218.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 217.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 217.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 216.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 216.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 215.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 215.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 214.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 214.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 214.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 213.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 213.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 212.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 212.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 212.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 211.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 210.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 209.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 207.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 207.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 206.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 205.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 204.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 204.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 204.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 203.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 203.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 202.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 201.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 201.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 200.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 200.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 200.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 199.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 199.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 199.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 199.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 198.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 198.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 198.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 197.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 197.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 197.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 196.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 196.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 196.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 195.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 194.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 194.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 193.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 193.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 193.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 192.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 192.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 190.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 189.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 189.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 188.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 188.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 186.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 186.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 186.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 186.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 185.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 185.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 183.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 182.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 182.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 181.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 181.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 180.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 180.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 178.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 178.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 178.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 178.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 177.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 177.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 176.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 175.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 175.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 174.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 174.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 174.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 173.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 173.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 172.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 171.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 171.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 171.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 169.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 168.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 166.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 166.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 166.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 165.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 165.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 165.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 163.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 162.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 162.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 161.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 161.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 160.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 160.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 159.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 158.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 157.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 156.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 156.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 156.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 155.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 154.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 153.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 151.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 148.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 146.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 145.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 143.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 138.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 132.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 132.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 130.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 129.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 127.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 126.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 123.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 117.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 111.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 108.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 98.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 90.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 73.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 246.5
Samples: 246

Max nTPM: 541.6
Min nTPM: 51.9
Std nTPM: 83.7
Median nTPM: 240.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 541.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 502.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 445.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 436.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 430.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 427.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 423.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 415.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 410.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 409.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 404.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 398.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 383.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 383.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 381.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 379.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 379.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 378.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 378.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 374.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 374.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 372.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 370.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 362.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 358.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 355.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 350.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 348.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 347.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 346.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 345.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 344.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 344.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 340.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 338.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 338.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 337.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 334.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 332.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 332.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 331.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 329.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 329.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 321.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 321.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 319.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 314.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 313.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 311.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 311.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 310.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 308.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 304.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 304.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 303.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 303.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 303.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 302.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 302.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 301.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 300.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 300.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 300.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 299.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 298.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 297.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 297.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 296.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 296.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 295.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 294.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 294.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 290.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 289.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 288.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 287.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 287.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 286.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 281.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 281.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 280.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 280.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 279.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 279.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 278.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 278.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 276.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 273.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 269.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 269.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 269.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 269.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 267.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 267.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 264.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 264.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 264.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 263.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 262.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 262.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 262.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 262.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 261.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 259.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 259.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 258.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 258.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 257.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 253.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 252.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 251.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 250.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 248.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 247.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 246.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 245.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 244.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 244.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 242.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 242.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 241.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 240.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 240.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 239.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 239.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 237.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 237.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 236.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 235.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 235.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 234.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 232.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 232.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 232.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 232.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 229.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 228.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 228.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 226.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 222.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 222.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 222.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 221.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 219.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 219.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 217.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 215.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 214.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 213.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 213.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 212.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 212.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 211.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 211.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 211.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 209.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 207.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 205.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 205.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 204.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 204.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 203.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 202.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 202.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 201.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 200.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 199.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 198.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 198.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 196.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 196.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 196.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 196.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 193.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 193.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 192.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 192.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 192.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 192.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 191.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 190.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 190.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 190.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 188.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 187.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 186.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 186.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 184.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 182.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 182.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 181.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 181.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 180.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 180.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 179.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 179.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 176.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 176.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 175.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 174.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 173.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 173.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 172.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 168.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 167.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 167.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 166.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 166.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 165.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 165.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 164.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 162.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 161.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 160.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 159.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 158.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 155.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 154.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 153.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 152.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 150.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 146.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 144.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 142.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 142.1
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 139.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 139.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 136.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 135.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 134.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 127.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 122.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 121.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 118.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 118.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 113.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 112.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 109.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 104.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 104.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 97.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 91.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 70.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 56.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 56.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 51.9
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Brain - Putamen (basal ganglia)
Average nTPM: 224.2
Samples: 205

Max nTPM: 473.5
Min nTPM: 64.8
Std nTPM: 61.9
Median nTPM: 218.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 473.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 414.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 388.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 388.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 386.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 379.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 355.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 354.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 348.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 347.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 342.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 336.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 334.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 331.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 315.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 314.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 314.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 310.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 307.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 301.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 299.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 297.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 296.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 295.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 293.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 292.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 289.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 289.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 284.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 282.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 281.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 281.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 276.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 276.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 276.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 275.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 274.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 273.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 272.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 271.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 271.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 270.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 269.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 269.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 268.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 265.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 265.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 263.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 260.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 258.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 258.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 258.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 256.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 255.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 255.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 255.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 252.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 252.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 248.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 246.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 245.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 245.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 245.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 244.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 243.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 243.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 242.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 242.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 242.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 241.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 241.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 240.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 240.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 240.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 239.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 238.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 237.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 236.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 235.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 234.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 233.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 233.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 231.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 231.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 231.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 230.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 229.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 229.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 227.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 226.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 226.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 226.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 225.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 225.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 224.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 224.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 223.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 221.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 221.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 220.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 220.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 219.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 218.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 217.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 217.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 215.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 215.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 215.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 213.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 213.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 213.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 212.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 208.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 207.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 207.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 207.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 207.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 207.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 206.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 206.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 205.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 203.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 203.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 202.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 202.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 202.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 201.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 201.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 199.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 197.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 195.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 192.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 192.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 192.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 191.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 190.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 190.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 189.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 189.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 189.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 188.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 188.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 187.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 186.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 186.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 186.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 185.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 185.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 184.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 184.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 183.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 182.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 181.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 181.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 180.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 180.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 179.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 179.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 179.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 177.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 177.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 177.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 176.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 175.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 174.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 173.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 172.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 172.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 171.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 171.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 171.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 170.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 168.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 167.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 166.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 166.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 165.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 165.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 163.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 163.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 163.0
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 161.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 160.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 160.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 160.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 154.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 153.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 153.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 148.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 146.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 145.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 143.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 143.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 137.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 137.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 133.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 132.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 128.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 124.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 121.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 119.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 112.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 105.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 99.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

159.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 159.5
FF:10164-103B2 76 years, female 159.5
Nucleus accumbens
Scaled Tags Per Million: 145.1
FF:10037-101F1 23-56 years, mixed 145.1
Putamen
Scaled Tags Per Million: 153.6
FF:10176-103C5 60 years, female 153.6
Globus pallidus
Scaled Tags Per Million: 46.6
FF:10161-103A8 76 years, female 59.5
FF:10175-103C4 60 years, female 33.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.6
Pig sample Sample description nTPM
Caudate
nTPM: 122.6
Samples: 4

Max nTPM: 161.6
Min nTPM: 91.2
Sample A Female 91.2
Sample B Female 124.2
Sample C Male 161.6
Sample D Male 113.2
Putamen
nTPM: 104.5
Samples: 4

Max nTPM: 129.0
Min nTPM: 56.0
Sample A Female 56.0
Sample B Female 104.4
Sample C Male 128.4
Sample D Male 129.0
Septum
nTPM: 64.4
Samples: 4

Max nTPM: 95.7
Min nTPM: 30.8
Sample A Female 95.7
Sample B Female 80.9
Sample C Male 50.3
Sample D Male 30.8
Ventral pallidum
nTPM: 85.3
Samples: 4

Max nTPM: 90.5
Min nTPM: 73.7
Sample A Female 89.7
Sample B Female 90.5
Sample C Male 73.7
Sample D Male 87.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 126.7
Samples: 4

Max nTPM: 140.7
Min nTPM: 115.2
Sample A Male 118.8
Sample B Male 140.7
Sample C Female 115.2
Sample D Female 131.9
Septum
nTPM: 65.0
Samples: 4

Max nTPM: 80.1
Min nTPM: 57.7
Sample A Male 80.1
Sample B Male 57.7
Sample C Female 63.4
Sample D Female 58.8
Ventral forebrain
nTPM: 120.8
Samples: 4

Max nTPM: 137.2
Min nTPM: 100.9
Sample A Male 131.3
Sample B Male 100.9
Sample C Female 137.2
Sample D Female 113.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.4
69059956 Antisense, RP_050317_04_G04, Mouse strain C57BL/6J (56 days, male) 8.4
Pallidum
Expression energy: 6.0
69059956 Antisense, RP_050317_04_G04, Mouse strain C57BL/6J (56 days, male) 6.0

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