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SH3BP1
HPA
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  • SH3BP1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SH3BP1
Synonyms ARHGAP43
Gene descriptioni

Full gene name according to HGNC.

SH3 domain binding protein 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Metabolic proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q13.1
Chromosome location (bp) 37634654 - 37656117
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000100092 (version 109)
Entrez gene 23616
HGNC HGNC:10824
UniProt Q9Y3L3 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y3L3
GeneCards SH3BP1
Antibodypedia SH3BP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

GTPase activating protein (GAP) which specifically converts GTP-bound Rho-type GTPases including RAC1 and CDC42 in their inactive GDP-bound form. By specifically inactivating RAC1 at the leading edge of migrating cells, it regulates the spatiotemporal organization of cell protrusions which is important for proper cell migration 1. Also negatively regulates CDC42 in the process of actin remodeling and the formation of epithelial cell junctions 2. Through its GAP activity toward RAC1 and/or CDC42 plays a specific role in phagocytosis of large particles. Specifically recruited by a PI3 kinase/PI3K-dependent mechanism to sites of large particles engagement, inactivates RAC1 and/or CDC42 allowing the reorganization of the underlying actin cytoskeleton required for engulfment 3. It also plays a role in angiogenesis and the process of repulsive guidance as part of a semaphorin-plexin signaling pathway. Following the binding of PLXND1 to extracellular SEMA3E it dissociates from PLXND1 and inactivates RAC1, inducing the intracellular reorganization of the actin cytoskeleton and the collapse of cells 4.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

GTPase activation
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Phagocytosis
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the Rho GTPase activating protein (RhoGAP) family. The encoded protein regulates Rac signaling and plays a role in cytoskeletal dynamics, cell motility and epithelial junction formation. This protein's association with the exocyst complex, which tethers secretory vesicles to the plasma membrane, has been demonstrated to be important in cell motility. In a distinct complex, this protein has been shown to regulate epithelial junction formation and morphogenesis. By interacting with the Plexin-D1 cell surface receptor, this protein mediates changes in the cytoskeleton in response to semaphorin binding. This protein may promote metastasis in human liver cancer cells and tissues. [provided by RefSeq, Mar 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SH3BP1-207
ENSP00000494748
ENST00000643339
A0A2R8Y5V0
[Direct mapping] SH3 domain-binding protein 1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
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GO:0007165 [signal transduction]
Show all
387 aa
40.3 kDa
No 0
SH3BP1-210
ENSP00000497104
ENST00000649765
Q9Y3L3
[Direct mapping] SH3 domain-binding protein 1
Show all
A0A2X0SFX7
[Target identity:100%; Query identity:100%] SH3-domain binding protein 1, isoform CRA_d; SH3BP1
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Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000145 [exocyst]
GO:0001891 [phagocytic cup]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005912 [adherens junction]
GO:0005923 [bicellular tight junction]
GO:0006909 [phagocytosis]
GO:0006911 [phagocytosis, engulfment]
GO:0007015 [actin filament organization]
GO:0007165 [signal transduction]
GO:0016477 [cell migration]
GO:0017124 [SH3 domain binding]
GO:0030027 [lamellipodium]
GO:0030215 [semaphorin receptor binding]
GO:0030834 [regulation of actin filament depolymerization]
GO:0031252 [cell leading edge]
GO:0032956 [regulation of actin cytoskeleton organization]
GO:0034329 [cell junction assembly]
GO:0035020 [regulation of Rac protein signal transduction]
GO:0042995 [cell projection]
GO:0043535 [regulation of blood vessel endothelial cell migration]
GO:0043547 [positive regulation of GTPase activity]
GO:0045198 [establishment of epithelial cell apical/basal polarity]
GO:0046847 [filopodium assembly]
GO:0051056 [regulation of small GTPase mediated signal transduction]
GO:0051058 [negative regulation of small GTPase mediated signal transduction]
GO:0070161 [anchoring junction]
GO:0071526 [semaphorin-plexin signaling pathway]
GO:0097178 [ruffle assembly]
GO:0110165 [cellular anatomical entity]
Show all
701 aa
75.7 kDa
No 0

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