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LGALS1
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  • LGALS1
TISSUE PRIMARY DATA OVARY Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Ovary
Tissue proteome
Ovary
OVARY - Expression summary
Protein expression
Ovaryi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Ovarian stroma cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1394.6 nTPM
HPA:1273.5 nTPM
GTEx:1394.6 nTPM
FANTOM5:780.1 Scaled Tags Per Million

OVARY - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000646Antibody CAB002157
Ovarian stroma cells HighMedium




OVARY - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1273.5
overview
Female, age 64
Ovary sample 192
nTPM: 1254.7
Cell types%
Stromal cells:
70

Smooth muscle cells:
15

Other cell types:
15

overview
Female, age 52
Ovary sample 193
nTPM: 791.7
Cell types%
Stromal cells:
95

Other cell types:
5

overview
Female, age 80
Ovary sample 308
nTPM: 498.2
Cell types%
Stromal cells:
70

Smooth muscle cells:
25

Other cell types:
5

N/A
Female, age 7
Ovary sample 3662
nTPM: 1064.5
N/A
Female, age 16
Ovary sample 3663
nTPM: 2672.8
N/A
Female, age 20
Ovary sample 3664
nTPM: 1128
N/A
Female, age 32
Ovary sample 3665
nTPM: 1504.8

OVARY - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1394.6
GTEx sample id Sample description nTPM
Ovary
Average nTPM: 1394.6
Samples: 180

Max nTPM: 2647.4
Min nTPM: 653.8
Std nTPM: 436.1
Median nTPM: 1352.0
GTEX-18A7A-2626-SM-7LG6L 50-59 years, female 2647.4
GTEX-1F6RS-2726-SM-7MKHA 60-69 years, female 2524.4
GTEX-1H2FU-2326-SM-9WG7R 60-69 years, female 2484.4
GTEX-WWYW-2726-SM-4MVOP 50-59 years, female 2345.8
GTEX-1J8JJ-0826-SM-AHZ3F 60-69 years, female 2314.9
GTEX-13SLX-2426-SM-664OM 50-59 years, female 2308.2
GTEX-1313W-2726-SM-5P9IX 50-59 years, female 2291.5
GTEX-ZPIC-1426-SM-4WWCP 40-49 years, female 2263.5
GTEX-QVJO-3126-SM-COH22 60-69 years, female 2227.2
GTEX-139D8-2426-SM-5KM3A 30-39 years, female 2201.5
GTEX-QCQG-1426-SM-48U22 50-59 years, female 2146.9
GTEX-R55G-1526-SM-48FER 40-49 years, female 2112.2
GTEX-1F52S-2226-SM-7MXVE 60-69 years, female 2110.7
GTEX-15DDE-2326-SM-6AJA8 50-59 years, female 2098.8
GTEX-11ZTS-1926-SM-5CVLA 60-69 years, female 2098.0
GTEX-XMD3-2326-SM-4AT5H 50-59 years, female 2089.8
GTEX-1ICG6-1526-SM-C1YQT 70-79 years, female 2084.1
GTEX-146FH-2526-SM-5Q5BP 50-59 years, female 2073.3
GTEX-SN8G-2426-SM-EVR31 50-59 years, female 2039.4
GTEX-YFC4-2726-SM-5IFJW 40-49 years, female 2009.8
GTEX-ZLWG-0926-SM-4WWC3 50-59 years, female 1989.1
GTEX-1F5PL-1626-SM-7MXTY 40-49 years, female 1986.7
GTEX-183WM-1926-SM-72D5F 70-79 years, female 1976.2
GTEX-1IDJE-1126-SM-A96SO 50-59 years, female 1970.4
GTEX-1I4MK-1526-SM-CE6T1 50-59 years, female 1960.5
GTEX-16MT8-2226-SM-6LPK2 60-69 years, female 1938.3
GTEX-RWS6-1026-SM-47JXD 60-69 years, female 1917.8
GTEX-1H1CY-1926-SM-9WG7X 60-69 years, female 1883.0
GTEX-ZAJG-2726-SM-5S2MU 50-59 years, female 1843.7
GTEX-1LNCM-0926-SM-DHXK5 50-59 years, female 1837.6
GTEX-X15G-1726-SM-4PQZN 50-59 years, female 1831.1
GTEX-XYKS-1726-SM-4E3IO 60-69 years, female 1808.9
GTEX-11GSP-0226-SM-5A5KV 60-69 years, female 1801.6
GTEX-1F88E-2026-SM-7MXVP 60-69 years, female 1796.5
GTEX-ZVT3-2626-SM-5GU5L 60-69 years, female 1770.0
GTEX-RTLS-2326-SM-46MUH 60-69 years, female 1763.3
GTEX-1269C-1826-SM-5N9E1 60-69 years, female 1759.5
GTEX-1OJC4-2026-SM-E6CQW 50-59 years, female 1757.5
GTEX-11ZVC-1426-SM-5EGGA 50-59 years, female 1742.0
GTEX-1B933-2126-SM-7MGXR 50-59 years, female 1736.4
GTEX-1J1OQ-1626-SM-CE6TB 40-49 years, female 1730.9
GTEX-1K9T9-2426-SM-DHXKT 50-59 years, female 1720.8
GTEX-13O3O-2726-SM-5KM35 60-69 years, female 1713.3
GTEX-1LVAM-1826-SM-DHXKR 50-59 years, female 1709.9
GTEX-W5WG-0926-SM-4RTX9 50-59 years, female 1693.7
GTEX-ZYY3-2726-SM-5EGH4 60-69 years, female 1657.1
GTEX-WYBS-2426-SM-4ONDI 60-69 years, female 1655.6
GTEX-16NGA-0426-SM-7LG6K 40-49 years, female 1654.8
GTEX-11I78-1926-SM-59878 50-59 years, female 1644.2
GTEX-13OVJ-2426-SM-5KM3I 50-59 years, female 1633.9
GTEX-WEY5-0626-SM-4LMIA 40-49 years, female 1625.0
GTEX-14BIN-1426-SM-664NI 50-59 years, female 1605.5
GTEX-1RDX4-0826-SM-E9TK7 50-59 years, female 1600.2
GTEX-UJHI-1226-SM-4IHLR 50-59 years, female 1596.2
GTEX-12ZZX-2026-SM-5LZV9 40-49 years, female 1588.6
GTEX-S341-0726-SM-4AD5R 40-49 years, female 1582.4
GTEX-145LS-2326-SM-5TDCY 60-69 years, female 1581.1
GTEX-OHPL-2426-SM-48TDN 60-69 years, female 1575.0
GTEX-RU72-2226-SM-46MUE 50-59 years, female 1573.9
GTEX-14DAQ-2226-SM-5YYAD 60-69 years, female 1564.1
GTEX-1EWIQ-2226-SM-7MGXJ 70-79 years, female 1561.7
GTEX-1GN1W-1426-SM-9JGHP 50-59 years, female 1556.3
GTEX-1A32A-2726-SM-73KVU 50-59 years, female 1499.0
GTEX-T2IS-2026-SM-4DM6W 20-29 years, female 1499.0
GTEX-13X6H-1026-SM-5SIBE 50-59 years, female 1486.9
GTEX-1F88F-2126-SM-9KNUK 60-69 years, female 1474.1
GTEX-1MCC2-1026-SM-EVR5I 30-39 years, female 1471.5
GTEX-WI4N-2526-SM-4OOSE 40-49 years, female 1471.0
GTEX-14PJM-2426-SM-686ZC 50-59 years, female 1468.4
GTEX-WXYG-1426-SM-4ONCK 50-59 years, female 1454.7
GTEX-S4P3-0926-SM-4AD54 50-59 years, female 1454.2
GTEX-1QEPI-2726-SM-DPRZ6 60-69 years, female 1454.2
GTEX-1A8FM-2226-SM-7PC1C 50-59 years, female 1450.3
GTEX-15UF6-2026-SM-6LPI3 70-79 years, female 1440.2
GTEX-131XG-1926-SM-5LZVG 50-59 years, female 1440.1
GTEX-ZP4G-0626-SM-4WWF1 20-29 years, female 1438.6
GTEX-XUW1-0126-SM-4BOOQ 50-59 years, female 1423.5
GTEX-1KANC-1026-SM-D3LAA 50-59 years, female 1415.2
GTEX-12WSJ-1226-SM-5LU91 40-49 years, female 1415.1
GTEX-1C475-0426-SM-7P8OU 40-49 years, female 1410.6
GTEX-15DYW-2626-SM-6LPK7 60-69 years, female 1405.2
GTEX-XUZC-1026-SM-4BOPY 30-39 years, female 1390.2
GTEX-14PKU-1226-SM-686ZM 40-49 years, female 1384.8
GTEX-ZV6S-1426-SM-59HKX 40-49 years, female 1378.2
GTEX-P4PP-2426-SM-3P61L 30-39 years, female 1374.0
GTEX-1JN1M-2126-SM-D4P2X 60-69 years, female 1373.2
GTEX-13PL7-2326-SM-5L3FY 60-69 years, female 1365.6
GTEX-X4EO-2426-SM-4QASD 60-69 years, female 1364.9
GTEX-P78B-1926-SM-3P616 40-49 years, female 1357.4
GTEX-1QP67-1526-SM-E76P4 40-49 years, female 1354.4
GTEX-13OVI-0726-SM-5L3DD 60-69 years, female 1349.6
GTEX-1PBJI-2026-SM-DPRYF 20-29 years, female 1345.3
GTEX-13QIC-1526-SM-5IJFL 60-69 years, female 1337.9
GTEX-17JCI-2326-SM-7IGPC 60-69 years, female 1328.3
GTEX-XV7Q-1426-SM-4BRWA 40-49 years, female 1327.2
GTEX-11EM3-1726-SM-5N9D1 20-29 years, female 1321.7
GTEX-1LKK1-1626-SM-EVR4Y 50-59 years, female 1304.5
GTEX-YJ8O-1026-SM-5CVM5 40-49 years, female 1302.1
GTEX-15SDE-0926-SM-6LPIA 50-59 years, female 1301.9
GTEX-1QPFJ-1726-SM-EXOJU 30-39 years, female 1297.2
GTEX-1QP28-1326-SM-DPRXZ 50-59 years, female 1291.9
GTEX-131YS-2226-SM-5P9G8 60-69 years, female 1291.8
GTEX-T5JW-0426-SM-4DM7M 20-29 years, female 1287.7
GTEX-13D11-1126-SM-5KLYS 50-59 years, female 1281.9
GTEX-14PN3-1526-SM-6ETZM 60-69 years, female 1240.4
GTEX-PLZ4-2826-SM-3P617 50-59 years, female 1236.6
GTEX-1PIEJ-1626-SM-E6CP9 20-29 years, female 1231.2
GTEX-145MI-2626-SM-5QGQ8 60-69 years, female 1223.9
GTEX-1MA7W-1426-SM-EV7A1 20-29 years, female 1216.9
GTEX-Y114-1726-SM-4TT7U 50-59 years, female 1212.4
GTEX-13VXT-1526-SM-5LU3J 20-29 years, female 1211.8
GTEX-X8HC-2726-SM-46MUA 50-59 years, female 1193.3
GTEX-PWN1-2426-SM-48TDD 40-49 years, female 1187.2
GTEX-1HBPH-2726-SM-A96TW 40-49 years, female 1177.7
GTEX-OHPK-2426-SM-3MJGH 50-59 years, female 1174.0
GTEX-ZZPU-2126-SM-5EGIU 50-59 years, female 1168.5
GTEX-15ER7-2326-SM-7KUN3 20-29 years, female 1166.4
GTEX-1LGOU-1026-SM-DHXL4 20-29 years, female 1131.1
GTEX-Y3IK-2026-SM-4YCDG 50-59 years, female 1123.1
GTEX-1GN1U-2326-SM-9MQK4 50-59 years, female 1120.9
GTEX-1JN76-1426-SM-AHZ4F 20-29 years, female 1113.6
GTEX-ZC5H-2026-SM-5CVN2 40-49 years, female 1109.6
GTEX-15FZZ-0826-SM-6LLJO 30-39 years, female 1107.7
GTEX-14JG6-0626-SM-68716 30-39 years, female 1105.7
GTEX-11P81-1526-SM-5P9GS 30-39 years, female 1104.0
GTEX-15EOM-1526-SM-68723 20-29 years, female 1103.6
GTEX-PX3G-2426-SM-48TZZ 20-29 years, female 1101.7
GTEX-1LVAN-2726-SM-CNPQG 50-59 years, female 1101.5
GTEX-1S5ZU-2326-SM-EAZ5B 20-29 years, female 1088.5
GTEX-11DXX-1426-SM-5GIDU 60-69 years, female 1088.2
GTEX-11EMC-1726-SM-5H11P 60-69 years, female 1083.2
GTEX-11VI4-1026-SM-5EQM1 40-49 years, female 1064.6
GTEX-TML8-0926-SM-4DXSJ 40-49 years, female 1054.4
GTEX-1HSGN-2426-SM-C1YRI 40-49 years, female 1053.3
GTEX-WYVS-1526-SM-4OND4 40-49 years, female 1047.8
GTEX-1R9PN-0626-SM-E6CR9 40-49 years, female 1040.9
GTEX-1F48J-2326-SM-7MKG3 50-59 years, female 1037.6
GTEX-S32W-1226-SM-4AD67 50-59 years, female 1029.0
GTEX-ZVT2-0326-SM-5E44G 50-59 years, female 1025.5
GTEX-U3ZN-1026-SM-4DXTC 30-39 years, female 1024.9
GTEX-1IDJU-1126-SM-A9G2S 60-69 years, female 1020.2
GTEX-Q734-0726-SM-48TZP 40-49 years, female 1018.4
GTEX-145ME-1226-SM-5SIB6 40-49 years, female 1016.9
GTEX-ZYFG-1726-SM-5GZZB 60-69 years, female 1014.4
GTEX-11ZTT-1826-SM-5CVLN 60-69 years, female 1009.2
GTEX-12WSD-2726-SM-59HLR 60-69 years, female 1005.1
GTEX-TSE9-2226-SM-4DXUR 60-69 years, female 991.5
GTEX-13U4I-2126-SM-5LU55 40-49 years, female 984.7
GTEX-14AS3-1326-SM-5RQJE 40-49 years, female 978.0
GTEX-T6MO-1126-SM-4DM5D 40-49 years, female 975.6
GTEX-133LE-1226-SM-5IFGC 20-29 years, female 924.5
GTEX-12WSG-1426-SM-5FQUK 50-59 years, female 917.9
GTEX-132AR-1426-SM-5IFF1 50-59 years, female 913.1
GTEX-RU1J-0826-SM-46MUU 20-29 years, female 911.5
GTEX-13FTX-0926-SM-5IFF7 20-29 years, female 905.3
GTEX-13W3W-1526-SM-5LU5I 60-69 years, female 901.4
GTEX-TMMY-1726-SM-4DXTD 40-49 years, female 898.3
GTEX-PWCY-1326-SM-48TCU 20-29 years, female 895.5
GTEX-12WSK-1926-SM-5LZVK 40-49 years, female 890.2
GTEX-13QBU-1526-SM-5LU3W 40-49 years, female 877.5
GTEX-1GZHY-2426-SM-9JGGK 50-59 years, female 876.3
GTEX-11XUK-1626-SM-5GU5O 40-49 years, female 874.1
GTEX-1IKOE-2326-SM-A8N99 30-39 years, female 858.8
GTEX-POMQ-1426-SM-3P61D 20-29 years, female 856.0
GTEX-14PKV-1226-SM-6871T 20-29 years, female 851.8
GTEX-18D9A-0826-SM-718C1 30-39 years, female 849.9
GTEX-1GF9X-2426-SM-7SB7W 40-49 years, female 838.2
GTEX-1HCUA-1326-SM-9WPP6 50-59 years, female 835.2
GTEX-13PVR-1226-SM-5RQJ2 60-69 years, female 832.0
GTEX-14BMU-1726-SM-5TDE8 20-29 years, female 801.1
GTEX-QDT8-2226-SM-EZ6LT 30-39 years, female 793.2
GTEX-1AMFI-1426-SM-731EL 50-59 years, female 763.2
GTEX-1399U-1726-SM-5P9J4 50-59 years, female 763.0
GTEX-1CAMS-2126-SM-7MXTF 40-49 years, female 759.1
GTEX-1AMEY-0926-SM-72D6G 30-39 years, female 758.6
GTEX-S7SF-1326-SM-4AD4P 20-29 years, female 728.8
GTEX-1399S-2126-SM-5J2MH 30-39 years, female 728.0
GTEX-13N11-0526-SM-5IJFI 50-59 years, female 717.4
GTEX-1LGRB-2326-SM-CNNPU 50-59 years, female 688.7
GTEX-P4QT-2426-SM-3NMCL 50-59 years, female 653.8
Show allShow less

OVARY - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

780.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Ovary
Scaled Tags Per Million: 780.1
FF:10020-101D2 47,75,84 years, female 780.1

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