We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RASD2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RASD2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:194.8 nTPM
HPA Brain:465.4 nTPM
GTEx:194.8 nTPM
FANTOM5:253.0 Scaled Tags Per Million
Pig:559.2 nTPM
Mouse:589.8 nTPM
Allen mouse:15.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA005839
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

465.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 355.5
2846 Female, age 79, unknown 528.3
2290 Female, age 72, unknown 498.1
1857 Female, age 85, left hemisphere 361.8
2289 Male, age 61, right hemisphere 329.9
2288 Male, age 75, left hemisphere 297.2
1781 Male, age 74, unknown 280.2
1854 Male, age 80, left hemisphere 275.3
2481 Female, age 94, left hemisphere 272.8
Globus pallidus, externus
nTPM: 30.3
2646 Male, age 61, right hemisphere 69.3
2395 Male, age 75, both hemispheres 39.8
2567 Female, age 72, unknown 18.1
2772 Female, age 79, unknown 15.3
1996 Male, age 80, right hemisphere 9.1
Globus pallidus, internus
nTPM: 30.1
2483 Female, age 94, right hemisphere 147.2
1818 Male, age 74, unknown 13.7
2566 Female, age 72, unknown 13.1
2287 Male, age 75, right hemisphere 10.6
2037 Male, age 80, right hemisphere 8.9
2111 Female, age 85, right hemisphere 8.9
2778 Female, age 91, both hemispheres 8.2
Nucleus accumbens
nTPM: 208.7
1783 Male, age 74, unknown 326.4
1806 Female, age 85, left hemisphere 250.9
1856 Female, age 91, right hemisphere 249.8
2824 Male, age 61, right hemisphere 246.8
2286 Male, age 75, left hemisphere 231.8
2391 Female, age 94, left hemisphere 188.9
2698 Female, age 72, unknown 142.8
2732 Male, age 80, right hemisphere 32.6
Nucleus basalis of Meynert
nTPM: 277.2
2484 Female, age 94, left hemisphere 520.7
2393 Male, age 80, right hemisphere 283.2
2821 Male, age 75, both hemispheres 188.7
2569 Male, age 61, both hemispheres 116.1
Nucleus of the diagonal band
nTPM: 54.3
2029 Male, age 61, right hemisphere 65.6
2195 Female, age 85, both hemispheres 58.2
1812 Female, age 91, both hemispheres 53.3
1979 Male, age 74, unknown 50.6
2775 Male, age 80, right hemisphere 43.7
Putamen
nTPM: 465.4
1829 Male, age 74, unknown 641.1
2489 Female, age 72, unknown 621.2
2466 Female, age 79, unknown 565.8
2647 Male, age 75, left hemisphere 398.1
1838 Male, age 80, right hemisphere 359.3
2482 Female, age 94, left hemisphere 350.1
1937 Female, age 91, right hemisphere 321.9
Septal nuclei
nTPM: 55.1
1960 Male, age 74, unknown 70.7
2629 Female, age 94, right hemisphere 63.7
2394 Male, age 61, left hemisphere 55.7
2059 Female, age 85, both hemispheres 54.2
2009 Female, age 91, both hemispheres 51.8
2031 Female, age 72, unknown 44.7
2199 Male, age 80, right hemisphere 44.5
Stria terminalis, bed nucleus
nTPM: 57.4
2486 Female, age 94, both hemispheres 102.3
1974 Female, age 91, both hemispheres 37.9
2201 Male, age 74, unknown 32.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

194.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 172.9
Samples: 246

Max nTPM: 435.6
Min nTPM: 19.2
Std nTPM: 92.7
Median nTPM: 163.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 435.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 409.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 404.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 399.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 377.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 371.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 361.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 360.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 359.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 340.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 340.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 337.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 327.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 325.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 325.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 323.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 320.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 319.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 318.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 303.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 299.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 298.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 297.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 295.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 292.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 291.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 287.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 286.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 286.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 285.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 284.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 284.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 283.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 276.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 274.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 272.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 271.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 270.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 270.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 269.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 266.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 266.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 265.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 263.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 261.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 260.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 259.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 258.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 251.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 251.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 250.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 248.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 248.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 246.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 244.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 244.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 243.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 243.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 243.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 242.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 241.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 241.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 241.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 240.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 240.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 239.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 237.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 235.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 234.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 233.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 233.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 231.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 230.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 229.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 229.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 227.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 225.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 224.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 223.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 221.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 221.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 216.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 215.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 214.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 212.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 212.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 211.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 211.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 208.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 208.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 208.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 205.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 205.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 205.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 205.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 203.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 203.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 202.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 201.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 200.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 199.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 199.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 198.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 194.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 193.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 192.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 191.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 187.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 186.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 185.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 185.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 183.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 183.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 181.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 180.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 179.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 179.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 170.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 170.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 169.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 167.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 164.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 164.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 162.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 162.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 157.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 156.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 155.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 155.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 154.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 154.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 154.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 150.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 149.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 148.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 148.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 146.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 146.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 145.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 145.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 145.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 144.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 144.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 141.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 141.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 140.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 138.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 137.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 135.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 135.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 131.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 131.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 131.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 131.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 130.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 129.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 127.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 126.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 125.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 125.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 124.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 123.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 123.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 121.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 120.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 119.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 115.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 115.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 112.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 112.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 111.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 109.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 109.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 108.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 105.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 104.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 103.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 103.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 102.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 99.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 93.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 89.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 87.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 86.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 86.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 85.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 85.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 84.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 84.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 84.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 83.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 83.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 82.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 81.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 80.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 79.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 78.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 78.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 77.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 77.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 75.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 73.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 69.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 69.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 68.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 66.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 65.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 65.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 62.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 61.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 60.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 58.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 54.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 53.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 53.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 51.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 51.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 51.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 50.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 46.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 45.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 43.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 38.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 37.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 36.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 35.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 33.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 30.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 30.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 26.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 23.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 21.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 20.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 19.2
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 87.1
Samples: 246

Max nTPM: 281.7
Min nTPM: 1.6
Std nTPM: 54.1
Median nTPM: 80.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 281.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 260.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 256.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 250.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 245.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 224.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 206.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 202.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 196.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 196.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 185.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 184.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 184.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 183.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 180.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 177.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 177.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 173.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 170.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 168.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 167.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 161.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 160.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 159.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 158.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 158.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 157.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 155.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 152.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 149.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 144.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 142.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 139.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 138.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 137.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 136.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 136.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 136.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 134.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 133.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 132.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 132.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 131.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 131.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 130.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 130.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 130.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 128.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 127.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 125.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 125.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 125.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 124.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 124.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 124.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 123.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 120.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 120.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 120.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 118.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 117.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 117.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 117.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 117.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 117.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 116.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 116.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 116.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 115.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 115.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 115.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 115.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 114.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 113.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 113.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 113.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 112.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 111.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 111.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 110.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 109.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 109.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 108.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 106.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 106.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 105.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 105.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 105.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 104.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 104.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 104.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 102.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 102.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 102.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 102.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 102.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 100.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 99.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 99.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 99.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 97.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 96.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 95.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 95.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 94.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 94.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 93.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 92.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 90.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 88.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 87.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 87.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 85.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 85.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 85.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 83.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 82.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 82.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 81.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 81.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 81.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 80.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 79.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 79.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 78.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 78.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 78.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 78.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 77.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 77.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 76.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 76.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 75.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 75.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 75.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 74.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 74.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 73.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 73.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 71.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 69.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 69.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 67.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 66.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 65.8
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 65.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 64.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 62.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 62.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 62.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 62.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 61.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 61.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 61.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 61.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 61.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 59.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 57.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 57.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 57.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 56.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 56.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 54.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 54.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 54.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 53.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 53.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 52.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 52.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 52.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 52.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 51.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 51.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 51.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 50.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 49.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 48.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 46.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 46.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 45.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 45.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 45.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 45.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 45.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 44.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 43.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 43.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 43.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 41.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 41.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 41.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 40.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 40.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 40.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 39.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 39.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 38.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 37.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 36.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 35.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 34.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 34.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 33.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 32.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 30.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 30.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 30.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 29.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 29.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 29.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 27.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 27.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 26.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 26.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 26.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 25.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 24.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 23.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 22.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 20.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 20.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 18.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 17.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 16.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 15.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 13.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 13.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 10.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 8.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 8.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 8.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 7.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 6.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 5.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 3.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 2.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 194.8
Samples: 205

Max nTPM: 519.5
Min nTPM: 13.4
Std nTPM: 103.1
Median nTPM: 189.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 519.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 450.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 427.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 425.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 420.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 415.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 414.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 385.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 379.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 377.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 374.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 368.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 366.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 366.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 365.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 361.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 357.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 348.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 347.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 338.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 334.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 333.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 332.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 332.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 325.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 325.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 325.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 325.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 319.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 319.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 310.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 310.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 308.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 306.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 305.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 305.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 299.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 299.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 296.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 295.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 288.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 286.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 283.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 283.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 276.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 275.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 274.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 268.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 264.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 263.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 261.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 261.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 257.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 256.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 256.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 255.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 250.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 248.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 247.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 246.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 243.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 243.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 240.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 240.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 235.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 235.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 233.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 232.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 227.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 227.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 227.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 223.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 223.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 221.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 221.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 220.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 218.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 217.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 216.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 212.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 211.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 210.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 208.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 208.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 206.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 203.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 203.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 202.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 201.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 200.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 200.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 199.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 198.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 197.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 195.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 194.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 194.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 193.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 192.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 192.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 191.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 191.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 189.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 188.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 188.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 187.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 187.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 185.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 184.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 183.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 182.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 182.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 179.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 176.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 174.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 174.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 174.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 173.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 171.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 169.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 168.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 167.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 167.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 163.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 162.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 162.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 161.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 160.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 159.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 156.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 155.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 151.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 143.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 143.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 140.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 138.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 138.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 136.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 133.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 133.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 133.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 132.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 131.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 129.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 125.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 125.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 124.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 121.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 121.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 121.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 120.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 119.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 116.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 115.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 113.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 111.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 108.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 105.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 103.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 102.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 101.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 100.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 100.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 100.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 97.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 97.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 94.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 90.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 85.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 84.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 83.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 81.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 81.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 77.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 77.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 75.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 73.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 72.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 72.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 72.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 70.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 68.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 67.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 65.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 65.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 64.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 62.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 59.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 57.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 53.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 48.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 45.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 41.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 40.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 39.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 36.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 30.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 28.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 26.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 24.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 19.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 13.4
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

253.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 159.4
FF:10164-103B2 76 years, female 159.4
Nucleus accumbens
Scaled Tags Per Million: 228.5
FF:10037-101F1 23-56 years, mixed 228.5
Putamen
Scaled Tags Per Million: 253.0
FF:10176-103C5 60 years, female 253.0
Globus pallidus
Scaled Tags Per Million: 153.6
FF:10175-103C4 60 years, female 264.4
FF:10161-103A8 76 years, female 42.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

559.2
Pig sample Sample description nTPM
Caudate
nTPM: 485.1
Samples: 4

Max nTPM: 715.5
Min nTPM: 279.8
Sample A Female 279.8
Sample B Female 408.6
Sample C Male 715.5
Sample D Male 536.3
Putamen
nTPM: 559.2
Samples: 4

Max nTPM: 855.4
Min nTPM: 98.1
Sample A Female 98.1
Sample B Female 525.4
Sample C Male 855.4
Sample D Male 757.9
Septum
nTPM: 53.8
Samples: 4

Max nTPM: 111.0
Min nTPM: 18.7
Sample A Female 65.2
Sample B Female 111.0
Sample C Male 18.7
Sample D Male 20.4
Ventral pallidum
nTPM: 163.2
Samples: 4

Max nTPM: 208.8
Min nTPM: 57.9
Sample A Female 190.0
Sample B Female 208.8
Sample C Male 57.9
Sample D Male 195.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

589.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 589.8
Samples: 4

Max nTPM: 665.9
Min nTPM: 501.7
Sample A Male 642.8
Sample B Male 665.9
Sample C Female 501.7
Sample D Female 548.8
Septum
nTPM: 76.5
Samples: 4

Max nTPM: 98.7
Min nTPM: 66.4
Sample A Male 66.4
Sample B Male 72.9
Sample C Female 67.9
Sample D Female 98.7
Ventral forebrain
nTPM: 186.6
Samples: 4

Max nTPM: 209.1
Min nTPM: 176.3
Sample A Male 182.1
Sample B Male 178.9
Sample C Female 209.1
Sample D Female 176.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

15.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 15.0
71920507 Antisense, RP_050915_02_C05, Mouse strain C57BL/6J (56 days, male) 15.0
73636089 Antisense, RP_050915_02_C05, Mouse strain C57BL/6J (56 days, male) 14.4
Pallidum
Expression energy: 4.2
71920507 Antisense, RP_050915_02_C05, Mouse strain C57BL/6J (56 days, male) 4.2
73636089 Antisense, RP_050915_02_C05, Mouse strain C57BL/6J (56 days, male) 2.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org