HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:24.9 nTPM
HPA Brain:124.2 nTPM
GTEx:24.9 nTPM
FANTOM5:94.6 Scaled Tags Per Million
Pig:116.5 nTPM
Mouse:93.3 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006240Antibody HPA075862
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 124.2
Sample id Sample description nTPM
Hippocampus
nTPM: 82.8
2621 Female, age 67, right hemisphere 96.9
2148 Female, age 91, left hemisphere 90.4
1898 Male, age 80, left hemisphere 87.7
1855 Male, age 76, left hemisphere 78.0
1911 Female, age 85, right hemisphere 72.0
2529 Female, age 94, left hemisphere 72.0
Dentate gyrus
nTPM: 88.5
1927 Female, age 91, both hemispheres 114.8
2531 Female, age 67, both hemispheres 103.5
2246 Female, age 85, both hemispheres 90.7
2528 Male, age 74, both hemispheres 74.4
2530 Female, age 94, left hemisphere 74.2
2010 Male, age 76, both hemispheres 73.8
Entorhinal gyrus
nTPM: 88.8
2613 Female, age 94, left hemisphere 105.4
2764 Male, age 80, right hemisphere 98.5
1787 Male, age 76, left hemisphere 94.3
1938 Female, age 85, left hemisphere 91.0
2686 Male, age 75, right hemisphere 85.5
2117 Female, age 91, right hemisphere 58.1
Hippocampus, CA1
nTPM: 92.0
2749 Male, age 80, left hemisphere 122.5
1873 Female, age 85, both hemispheres 92.0
2045 Male, age 76, both hemispheres 87.8
2527 Male, age 74, both hemispheres 87.3
2082 Female, age 91, right hemisphere 70.5
Hippocampus, CA2
nTPM: 81.8
1892 Male, age 76, both hemispheres 102.5
2437 Female, age 94, left hemisphere 90.9
1963 Male, age 80, left hemisphere 90.8
1940 Female, age 85, left hemisphere 70.5
2113 Female, age 91, right hemisphere 68.7
2249 Male, age 74, both hemispheres 67.5
Hippocampus, CA3
nTPM: 95.0
2137 Male, age 80, left hemisphere 121.6
2620 Female, age 94, left hemisphere 119.9
2861 Female, age 67, both hemispheres 96.8
1867 Male, age 76, both hemispheres 82.7
2436 Male, age 74, both hemispheres 79.0
1891 Female, age 85, both hemispheres 69.8
Parahippocampal cortex
nTPM: 100.6
2245 Female, age 91, both hemispheres 119.3
2693 Female, age 94, both hemispheres 114.1
1850 Male, age 80, both hemispheres 110.7
2622 Female, age 67, right hemisphere 105.3
2532 Female, age 72, left hemisphere 103.8
1990 Female, age 91, right hemisphere 102.4
2250 Female, age 67, right hemisphere 98.3
1933 Female, age 85, both hemispheres 97.5
2018 Male, age 76, both hemispheres 81.3
2692 Male, age 74, both hemispheres 73.0
Perirhinal gyrus
nTPM: 124.2
1847 Female, age 91, left hemisphere 141.4
2521 Female, age 94, right hemisphere 134.1
1794 Male, age 80, right hemisphere 128.5
1841 Female, age 85, right hemisphere 110.7
2848 Male, age 76, right hemisphere 106.1
Subiculum
nTPM: 78.5
2438 Female, age 94, left hemisphere 101.8
1977 Female, age 85, both hemispheres 92.3
1901 Male, age 80, both hemispheres 82.8
2619 Male, age 74, both hemispheres 75.7
2729 Female, age 91, right hemisphere 65.0
2042 Male, age 76, both hemispheres 53.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 24.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.9
Samples: 197

Max nTPM: 61.1
Min nTPM: 8.6
Std nTPM: 10.9
Median nTPM: 22.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 61.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 59.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 56.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 56.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 53.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 53.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 49.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 48.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 48.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 48.3
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 46.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 94.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 94.6
FF:10169-103B7 60 years, female 103.8
FF:10153-102I9 76 years, female 85.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 116.5
Pig sample Sample description nTPM
Subiculum
nTPM: 107.8
Samples: 4

Max nTPM: 134.5
Min nTPM: 91.6
Sample A Female 134.5
Sample B Female 102.3
Sample C Male 102.8
Sample D Male 91.6
Dorsal hippocampus
nTPM: 94.9
Samples: 4

Max nTPM: 110.6
Min nTPM: 77.7
Sample A Female 100.5
Sample B Female 110.6
Sample C Male 77.7
Sample D Male 90.7
Entorhinal cortex
nTPM: 116.5
Samples: 4

Max nTPM: 123.5
Min nTPM: 108.3
Sample A Female 122.2
Sample B Female 108.3
Sample C Male 123.5
Sample D Male 112.0
Ventral hippocampus
nTPM: 97.6
Samples: 4

Max nTPM: 113.7
Min nTPM: 81.7
Sample A Female 81.7
Sample B Female 87.5
Sample C Male 113.7
Sample D Male 107.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 93.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.3
Samples: 4

Max nTPM: 106.5
Min nTPM: 86.2
Sample A Male 86.2
Sample B Male 93.8
Sample C Female 86.5
Sample D Female 106.5
Hippocampal formation
nTPM: 80.0
Samples: 4

Max nTPM: 83.5
Min nTPM: 75.5
Sample A Male 83.5
Sample B Male 82.6
Sample C Female 75.5
Sample D Female 78.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
71325402 Antisense, RP_050825_02_G09, Mouse strain C57BL/6J (56 days, male) 10.4

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