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EIF3D
HPA
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  • EIF3D
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

EIF3D
Synonyms eIF3-p66, eIF3-zeta, EIF3S7
Gene descriptioni

Full gene name according to HGNC.

Eukaryotic translation initiation factor 3 subunit D
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q12.3
Chromosome location (bp) 36510855 - 36529184
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

6
Ensembl ENSG00000100353 (version 109)
Entrez gene 8664
HGNC HGNC:3278
UniProt O15371 (UniProt - Evidence at protein level)
neXtProt NX_O15371
GeneCards EIF3D
Antibodypedia EIF3D antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

mRNA cap-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, a complex required for several steps in the initiation of protein synthesis of a specialized repertoire of mRNAs 1. The eIF-3 complex associates with the 40S ribosome and facilitates the recruitment of eIF-1, eIF-1A, eIF-2:GTP:methionyl-tRNAi and eIF-5 to form the 43S pre-initiation complex (43S PIC). The eIF-3 complex stimulates mRNA recruitment to the 43S PIC and scanning of the mRNA for AUG recognition. The eIF-3 complex is also required for disassembly and recycling of post-termination ribosomal complexes and subsequently prevents premature joining of the 40S and 60S ribosomal subunits prior to initiation 2, 3. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation, including cell cycling, differentiation and apoptosis, and uses different modes of RNA stem-loop binding to exert either translational activation or repression 4. In the eIF-3 complex, EIF3D specifically recognizes and binds the 7-methylguanosine cap of a subset of mRNAs 5.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Initiation factor, RNA-binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Host-virus interaction, Protein biosynthesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

Eukaryotic translation initiation factor-3 (eIF3), the largest of the eIFs, is a multiprotein complex composed of at least ten nonidentical subunits. The complex binds to the 40S ribosome and helps maintain the 40S and 60S ribosomal subunits in a dissociated state. It is also thought to play a role in the formation of the 40S initiation complex by interacting with the ternary complex of eIF2/GTP/methionyl-tRNA, and by promoting mRNA binding. The protein encoded by this gene is the major RNA binding subunit of the eIF3 complex. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
EIF3D-201
ENSP00000216190
ENST00000216190
O15371
[Direct mapping] Eukaryotic translation initiation factor 3 subunit D
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001732 [formation of cytoplasmic translation initiation complex]
GO:0002183 [cytoplasmic translational initiation]
GO:0002191 [cap-dependent translational initiation]
GO:0003723 [RNA binding]
GO:0003743 [translation initiation factor activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006412 [translation]
GO:0006413 [translational initiation]
GO:0016020 [membrane]
GO:0016282 [eukaryotic 43S preinitiation complex]
GO:0033290 [eukaryotic 48S preinitiation complex]
GO:0045202 [synapse]
GO:0045727 [positive regulation of translation]
GO:0071541 [eukaryotic translation initiation factor 3 complex, eIF3m]
GO:0075522 [IRES-dependent viral translational initiation]
GO:0075525 [viral translational termination-reinitiation]
GO:0098808 [mRNA cap binding]
GO:1902416 [positive regulation of mRNA binding]
Show all
548 aa
64 kDa
No 0
EIF3D-202
ENSP00000385212
ENST00000402116
B0QYA8
[Direct mapping] Eukaryotic translation initiation factor 3 subunit D
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003743 [translation initiation factor activity]
GO:0005737 [cytoplasm]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006413 [translational initiation]
Show all
123 aa
14.5 kDa
No 0
EIF3D-203
ENSP00000385812
ENST00000405442
O15371
[Direct mapping] Eukaryotic translation initiation factor 3 subunit D
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001732 [formation of cytoplasmic translation initiation complex]
GO:0002183 [cytoplasmic translational initiation]
GO:0002191 [cap-dependent translational initiation]
GO:0003723 [RNA binding]
GO:0003743 [translation initiation factor activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006412 [translation]
GO:0006413 [translational initiation]
GO:0016020 [membrane]
GO:0016282 [eukaryotic 43S preinitiation complex]
GO:0033290 [eukaryotic 48S preinitiation complex]
GO:0045727 [positive regulation of translation]
GO:0075522 [IRES-dependent viral translational initiation]
GO:0075525 [viral translational termination-reinitiation]
GO:0098808 [mRNA cap binding]
GO:1902416 [positive regulation of mRNA binding]
Show all
548 aa
64 kDa
No 0
EIF3D-206
ENSP00000390438
ENST00000455547
B0QYA5
[Direct mapping] Eukaryotic translation initiation factor 3 subunit D
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003743 [translation initiation factor activity]
GO:0005737 [cytoplasm]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006413 [translational initiation]
Show all
269 aa
31.7 kDa
No 0
EIF3D-207
ENSP00000403584
ENST00000457241
B0QYA6
[Direct mapping] Eukaryotic translation initiation factor 3 subunit D
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003743 [translation initiation factor activity]
GO:0005737 [cytoplasm]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006413 [translational initiation]
Show all
173 aa
20.7 kDa
No 0
EIF3D-211
ENSP00000487325
ENST00000478547
A0A0D9SGB5
[Direct mapping] Eukaryotic translation initiation factor 3 subunit D
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003743 [translation initiation factor activity]
GO:0005737 [cytoplasm]
GO:0005852 [eukaryotic translation initiation factor 3 complex]
GO:0006413 [translational initiation]
Show all
49 aa
5.7 kDa
No 0

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