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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
138.2
nTPM
GTEx:
138.2
nTPM
FANTOM5:
138.0
Scaled Tags Per Million
Pig:
87.8
nTPM
Mouse:
152.2
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
138.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 138.2
Samples: 105
Max nTPM: 267.1
Min nTPM: 91.3
Std nTPM: 29.1
Median nTPM:
491_1
89 years, female
267.1
413_1
59 years, female
233.0
490_1
67 years, female
204.5
414_1
84 years, female
202.6
415_1
77 years, female
188.6
41_1
94 years, female
184.7
308_1
70 years, female
182.2
43_1
64 years, female
176.6
307_1
66 years, female
175.5
149_1
88 years, male
172.8
347_1
72 years, male
172.5
495_1
57 years, female
172.3
501_1
88 years, male
169.8
447_1
81 years, male
169.4
139_1
64 years, female
168.2
145_1
84 years, male
165.2
315_1
62 years, female
163.6
89_1
63 years, male
163.1
379_1
60 years, male
162.8
137_1
83 years, male
162.5
162_1
79 years, female
161.9
81_1
67 years, male
161.1
466_1
57 years, female
160.8
311_1
78 years, male
159.6
120_1
70 years, female
159.0
324_1
76 years, male
158.0
142_1
61 years, female
156.2
99_1
64 years, male
154.8
35_1
74 years, female
154.3
32_1
67 years, male
153.0
173_1
67 years, male
152.0
314_1
67 years, male
150.6
375_1
74 years, female
149.7
117_1
61 years, male
147.7
518_1
75 years, female
146.3
317_1
60 years, male
145.4
109_1
81 years, female
144.1
42_1
85 years, male
143.5
119_1
70 years, female
143.0
288_1
66 years, female
141.9
17_1
71 years, male
141.7
384_1
83 years, male
138.4
126_1
63 years, male
137.8
386_1
76 years, male
137.5
6_1
73 years, female
137.2
348_1
84 years, male
136.5
229_1
69 years, female
136.2
389_1
86 years, female
135.5
254_1
77 years, female
134.4
153_1
70 years, female
134.0
18_1
88 years, male
132.7
396_1
62 years, male
132.4
189_1
76 years, male
132.2
321_1
62 years, female
131.9
526_1
61 years, male
131.9
246_1
77 years, male
131.8
452_1
88 years, female
131.5
266_1
85 years, male
130.4
316_1
62 years, male
130.4
115_1
83 years, male
129.3
468_1
89 years, male
129.3
243_1
75 years, male
128.9
177_1
74 years, male
128.2
405_1
91 years, male
127.3
2_1
77 years, female
127.0
217_1
76 years, male
125.9
322_1
76 years, male
125.6
265_1
87 years, male
124.7
499_1
55 years, female
123.8
313_1
79 years, female
123.3
425_1
59 years, female
123.3
9_1
66 years, female
121.6
404_1
82 years, female
121.4
291_1
76 years, male
120.6
506_1
65 years, male
119.6
355_1
70 years, female
117.9
237_1
82 years, male
117.1
295_1
61 years, female
116.9
377_1
82 years, female
116.7
376_1
75 years, female
115.3
349_1
83 years, male
115.2
4_1
88 years, female
115.1
172_1
72 years, female
114.6
318_1
68 years, male
114.5
353_1
82 years, female
113.6
351_1
91 years, male
112.7
480_1
63 years, male
112.0
503_1
68 years, male
111.0
292_1
71 years, male
110.5
517_1
88 years, male
109.8
293_1
68 years, female
108.3
352_1
62 years, male
108.3
335_1
73 years, female
108.0
218_1
71 years, female
106.4
406_1
79 years, male
105.4
354_1
81 years, female
105.2
394_1
75 years, female
105.1
251_1
78 years, male
103.6
319_1
81 years, male
102.8
163_1
78 years, male
101.2
320_1
89 years, female
101.1
286_1
68 years, female
101.0
264_1
73 years, female
99.9
350_1
84 years, female
96.1
356_1
87 years, female
91.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
