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RANGAP1
HPA
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  • RANGAP1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RANGAP1
Synonyms Fug1, KIAA1835, SD
Gene descriptioni

Full gene name according to HGNC.

Ran GTPase activating protein 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 22
Cytoband q13.2
Chromosome location (bp) 41244779 - 41286187
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000100401 (version 109)
Entrez gene 5905
HGNC HGNC:9854
UniProt P46060 (UniProt - Evidence at protein level)
neXtProt NX_P46060
GeneCards RANGAP1
Antibodypedia RANGAP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

GTPase activator for RAN 1, 2, 3. Converts cytoplasmic GTP-bound RAN to GDP-bound RAN, which is essential for RAN-mediated nuclear import and export 4, 5. Mediates dissociation of cargo from nuclear export complexes containing XPO1, RAN and RANBP2 after nuclear export 6.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

GTPase activation
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that associates with the nuclear pore complex and participates in the regulation of nuclear transport. The encoded protein interacts with Ras-related nuclear protein 1 (RAN) and regulates guanosine triphosphate (GTP)-binding and exchange. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2013]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RANGAP1-201
ENSP00000348577
ENST00000356244
P46060
[Direct mapping] Ran GTPase-activating protein 1
Show all
A0A024R1U0
[Target identity:100%; Query identity:100%] Ran GTPase activating protein 1, isoform CRA_d
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0003723 [RNA binding]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005643 [nuclear pore]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006913 [nucleocytoplasmic transport]
GO:0007165 [signal transduction]
GO:0016235 [aggresome]
GO:0016925 [protein sumoylation]
GO:0030425 [dendrite]
GO:0031267 [small GTPase binding]
GO:0031625 [ubiquitin protein ligase binding]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0044614 [nuclear pore cytoplasmic filaments]
GO:0045296 [cadherin binding]
GO:0046826 [negative regulation of protein export from nucleus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0048678 [response to axon injury]
GO:0051168 [nuclear export]
GO:0071375 [cellular response to peptide hormone stimulus]
GO:0072686 [mitotic spindle]
GO:0090630 [activation of GTPase activity]
GO:0106068 [SUMO ligase complex]
GO:1904115 [axon cytoplasm]
GO:1904117 [cellular response to vasopressin]
GO:1990723 [cytoplasmic periphery of the nuclear pore complex]
Show all
587 aa
63.5 kDa
No 0
RANGAP1-202
ENSP00000385866
ENST00000405486
P46060
[Direct mapping] Ran GTPase-activating protein 1
Show all
A0A024R1U0
[Target identity:100%; Query identity:100%] Ran GTPase activating protein 1, isoform CRA_d
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0003723 [RNA binding]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005643 [nuclear pore]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006913 [nucleocytoplasmic transport]
GO:0007165 [signal transduction]
GO:0016235 [aggresome]
GO:0016925 [protein sumoylation]
GO:0031267 [small GTPase binding]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045296 [cadherin binding]
GO:0046826 [negative regulation of protein export from nucleus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051168 [nuclear export]
GO:0090630 [activation of GTPase activity]
GO:0106068 [SUMO ligase complex]
Show all
587 aa
63.5 kDa
No 0
RANGAP1-203
ENSP00000408743
ENST00000418067
B0QYT5
[Direct mapping] Ran GTPase-activating protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
100 aa
10.9 kDa
No 0
RANGAP1-204
ENSP00000404842
ENST00000422838
B0QYT6
[Direct mapping] Ran GTPase-activating protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
37 aa
3.9 kDa
No 0
RANGAP1-205
ENSP00000393407
ENST00000446258
H0Y4Q3
[Direct mapping] Ran GTPase-activating protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0016235 [aggresome]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
253 aa
26.8 kDa
No 0
RANGAP1-206
ENSP00000394787
ENST00000452543
B0QYT4
[Direct mapping] Ran GTPase-activating protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005829 [cytosol]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
133 aa
14.3 kDa
No 0
RANGAP1-207
ENSP00000401470
ENST00000455915
P46060
[Direct mapping] Ran GTPase-activating protein 1
Show all
A0A024R1U0
[Target identity:100%; Query identity:100%] Ran GTPase activating protein 1, isoform CRA_d
Show all
Transporters
   Transporter channels and pores
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000775 [chromosome, centromeric region]
GO:0000776 [kinetochore]
GO:0003723 [RNA binding]
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005635 [nuclear envelope]
GO:0005643 [nuclear pore]
GO:0005654 [nucleoplasm]
GO:0005694 [chromosome]
GO:0005737 [cytoplasm]
GO:0005819 [spindle]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006913 [nucleocytoplasmic transport]
GO:0007165 [signal transduction]
GO:0016235 [aggresome]
GO:0016925 [protein sumoylation]
GO:0031267 [small GTPase binding]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
GO:0045296 [cadherin binding]
GO:0046826 [negative regulation of protein export from nucleus]
GO:0048471 [perinuclear region of cytoplasm]
GO:0051168 [nuclear export]
GO:0090630 [activation of GTPase activity]
GO:0106068 [SUMO ligase complex]
Show all
587 aa
63.5 kDa
No 0
RANGAP1-208
ENSP00000516069
ENST00000705116
A0A024R1U0
[Target identity:100%; Query identity:100%] Ran GTPase activating protein 1, isoform CRA_d
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0007165 [signal transduction]
GO:0016235 [aggresome]
GO:0031965 [nuclear membrane]
GO:0043231 [intracellular membrane-bounded organelle]
Show all
587 aa
63.5 kDa
No 0

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