PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		65.789
Mouse brain, Intensity
Ponsi 		31.272
RNA expressioni
HPA Brain:159.4 nTPM
FANTOM5:192.6 Scaled Tags Per Million
Pig:152.8 nTPM
Mouse:443.5 nTPM
Allen mouse:12.7 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA001097
Medulla oblongata mean intensity 65.789
intensityi
FRONT BACK
Nucleus of the solitary tract -
Raphe magnus nucleus 33.888
Cochlear nucleus 28.464
Lateral paragigantocellular nucleus 8.995
Raphe pallidus nucleus 28.144
Facial nucleus 30.250
Hypoglossal nucleus 65.342
Ambiguus nucleus -
External cuneate nucleus 29.591
Inferior olivary nucleus -
Raphe obscures nucleus -
Dorsal motor nucleus of vagus 65.789
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus -
Parabrachial nucleus -
Principle sensory trigeminal nucleus 24.445
Locus coeruleus 31.272
Pontine nucleus 24.788
Vestibular nucleus 22.281
Pontine reticular nucleus, oral 18.987
Lateral lemniscus 7.597
Superior paraolivary nucleus -

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 159.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 116.3
1984 Male, age 76, both hemispheres 131.0
2301 Female, age 85, both hemispheres 119.3
2188 Female, age 91, both hemispheres 107.7
2090 Male, age 80, both hemispheres 107.0
Area postrema
nTPM: 134.6
2799 Male, age 61, both hemispheres 149.4
2306 Male, age 80, both hemispheres 131.4
2054 Male, age 76, both hemispheres 122.9
Dorsal cochlear nucleus
nTPM: 130.5
2802 Male, age 74, right hemisphere 144.9
2058 Male, age 76, both hemispheres 139.7
2370 Male, age 61, both hemispheres 131.8
2378 Male, age 80, both hemispheres 126.3
2187 Female, age 91, both hemispheres 110.0
Dorsal medullary reticular nucleus
nTPM: 128.6
2040 Female, age 85, both hemispheres 160.4
2088 Male, age 76, both hemispheres 130.0
2373 Male, age 61, both hemispheres 95.4
Dorsal motor vagal complex
nTPM: 139.6
2643 Male, age 74, both hemispheres 175.2
2185 Male, age 76, both hemispheres 166.1
2797 Male, age 61, both hemispheres 165.0
2133 Female, age 91, both hemispheres 137.1
2813 Female, age 72, unknown 131.9
2000 Male, age 74, unknown 131.7
2844 Male, age 55, unknown 126.1
2807 Female, age 85, both hemispheres 84.0
Dorsal tegmental nucleus
nTPM: 125.5
2083 Male, age 80, both hemispheres 147.5
1936 Male, age 76, left hemisphere 126.0
2326 Male, age 74, both hemispheres 125.9
2358 Male, age 61, both hemispheres 102.6
Dorsolateral tegmental area
nTPM: 118.4
2751 Female, age 85, both hemispheres 148.3
2654 Male, age 80, both hemispheres 140.0
2141 Male, age 76, both hemispheres 130.7
2360 Male, age 74, both hemispheres 98.6
2337 Male, age 61, both hemispheres 74.7
Gigantocellular reticular nuclei, medullary
nTPM: 127.1
2462 Male, age 74, both hemispheres 154.5
1876 Female, age 85, both hemispheres 142.6
2387 Female, age 91, both hemispheres 130.8
2022 Male, age 76, right hemisphere 125.7
2310 Male, age 80, both hemispheres 113.5
2314 Male, age 61, both hemispheres 95.3
Gigantocellular reticular nuclei, pars
nTPM: 131.5
2084 Female, age 85, both hemispheres 168.0
2168 Male, age 76, both hemispheres 167.9
2336 Male, age 61, both hemispheres 120.8
2330 Male, age 80, both hemispheres 102.4
2706 Male, age 80, both hemispheres 98.6
Inferior olive
nTPM: 130.9
2563 Male, age 74, both hemispheres 158.6
2085 Female, age 85, both hemispheres 145.8
2628 Female, age 91, both hemispheres 134.8
2379 Male, age 80, both hemispheres 111.0
2178 Male, age 61, both hemispheres 104.2
Kolliker-Fuse nucleus
nTPM: 136.4
2163 Male, age 80, both hemispheres 150.8
2315 Male, age 76, right hemisphere 136.6
2793 Female, age 91, left hemisphere 121.8
Lateral lemniscal nuclei
nTPM: 148.3
2169 Male, age 76, both hemispheres 178.2
2746 Female, age 85, left hemisphere 158.1
2036 Male, age 80, both hemispheres 147.3
2453 Male, age 74, right hemisphere 146.0
2320 Female, age 91, left hemisphere 112.0
Lateral medullary reticular nucleus
nTPM: 123.6
2044 Male, age 76, both hemispheres 151.1
2804 Female, age 91, both hemispheres 132.1
2852 Male, age 80, both hemispheres 123.4
2190 Female, age 85, both hemispheres 122.0
2374 Male, age 61, both hemispheres 107.5
2305 Male, age 74, both hemispheres 105.2
Lateral parabrachial nucleus
nTPM: 122.3
2139 Female, age 85, right hemisphere 178.8
2013 Male, age 80, both hemispheres 125.2
2792 Male, age 76, both hemispheres 99.8
2790 Male, age 61, both hemispheres 85.7
Lateral vestibular nucleus
nTPM: 130.9
2184 Male, age 76, both hemispheres 151.7
2311 Male, age 80, both hemispheres 110.2
Locus coeruleus
nTPM: 133.8
2123 Female, age 91, both hemispheres 170.7
2014 Male, age 55, unknown 139.9
2317 Female, age 72, unknown 135.4
1980 Male, age 76, both hemispheres 134.3
2720 Male, age 74, both hemispheres 125.3
2162 Male, age 80, both hemispheres 120.7
2788 Male, age 74, unknown 110.2
Medial olivary nucleus
nTPM: 105.7
2138 Female, age 91, both hemispheres 136.3
2851 Male, age 80, both hemispheres 103.1
1962 Male, age 76, both hemispheres 98.7
1943 Male, age 61, both hemispheres 84.5
Medial parabrachial nucleus
nTPM: 129.9
2463 Female, age 85, right hemisphere 136.6
2170 Female, age 91, both hemispheres 135.5
2854 Male, age 80, both hemispheres 135.1
2786 Male, age 76, both hemispheres 127.6
2156 Male, age 61, both hemispheres 114.5
Medial periolivary nuclei
nTPM: 136.6
2171 Female, age 85, both hemispheres 184.4
2063 Male, age 76, both hemispheres 176.7
2791 Male, age 74, right hemisphere 125.5
2081 Male, age 80, both hemispheres 100.7
2458 Female, age 91, both hemispheres 95.7
Medial vestibular nucleus
nTPM: 148.6
2093 Male, age 80, both hemispheres 156.5
2624 Male, age 61, both hemispheres 156.0
2134 Male, age 76, both hemispheres 152.4
2803 Female, age 91, both hemispheres 152.1
2743 Female, age 85, both hemispheres 146.3
2801 Male, age 74, both hemispheres 128.1
Motor facial nucleus
nTPM: 138.0
2062 Male, age 76, both hemispheres 200.3
2795 Female, age 91, both hemispheres 149.2
2365 Male, age 74, right hemisphere 136.5
2697 Female, age 85, both hemispheres 123.6
2327 Male, age 80, both hemispheres 109.5
2126 Male, age 61, both hemispheres 109.1
Motor hypoglossal nucleus
nTPM: 128.6
2125 Female, age 91, both hemispheres 156.5
2461 Male, age 61, both hemispheres 141.1
2132 Female, age 85, both hemispheres 129.2
2277 Male, age 76, both hemispheres 108.3
2182 Male, age 80, both hemispheres 108.1
Motor trigeminal nucleus
nTPM: 122.1
2560 Male, age 74, both hemispheres 145.9
2079 Male, age 80, both hemispheres 130.9
2309 Male, age 76, both hemispheres 127.0
2335 Male, age 61, both hemispheres 120.5
2321 Female, age 91, both hemispheres 86.1
Nuclei of the trapezoid body
nTPM: 159.4
2159 Male, age 61, both hemispheres 201.7
2735 Female, age 85, both hemispheres 181.5
1983 Male, age 76, both hemispheres 175.9
2368 Female, age 91, both hemispheres 122.5
2166 Male, age 80, both hemispheres 115.5
Nucleus ambiguus
nTPM: 128.6
2096 Female, age 85, both hemispheres 137.0
2071 Male, age 76, both hemispheres 120.2
Nucleus cuneatus
nTPM: 139.3
2564 Male, age 74, both hemispheres 201.5
2100 Male, age 76, both hemispheres 167.2
2131 Male, age 76, both hemispheres 158.7
2805 Female, age 91, both hemispheres 156.9
2562 Male, age 61, both hemispheres 144.9
2380 Male, age 80, both hemispheres 112.6
2376 Male, age 61, both hemispheres 105.7
2808 Female, age 85, both hemispheres 104.6
2381 Male, age 80, both hemispheres 101.2
Nucleus gracilis
nTPM: 130.5
2627 Male, age 74, both hemispheres 167.8
2299 Female, age 85, both hemispheres 119.3
2382 Male, age 80, both hemispheres 104.3
Nucleus raphe magnus
nTPM: 155.6
2160 Male, age 61, both hemispheres 220.1
2172 Female, age 85, both hemispheres 172.1
2455 Male, age 74, both hemispheres 171.0
2051 Male, age 76, both hemispheres 146.8
2328 Male, age 80, both hemispheres 128.8
2459 Female, age 91, both hemispheres 94.5
Nucleus raphe obscurus
nTPM: 98.5
2845 Female, age 85, midline 106.6
2142 Male, age 76, midline 97.2
2800 Male, age 61, midline 91.7
Nucleus raphe pallidus
nTPM: 112.8
2183 Male, age 80, midline 132.6
1924 Male, age 61, midline 116.9
2145 Male, age 76, midline 88.8
Nucleus tractus solitarii
nTPM: 97.7
2656 Male, age 76, both hemispheres 116.6
2191 Female, age 85, both hemispheres 110.1
2144 Female, age 91, right hemisphere 98.0
2307 Male, age 80, both hemispheres 66.1
Paramedian reticular nucleus
nTPM: 138.1
2050 Female, age 85, both hemispheres 166.7
2057 Male, age 80, both hemispheres 145.1
2313 Male, age 61, both hemispheres 145.1
2052 Male, age 76, both hemispheres 95.4
Parvicellular reticular nuclei
nTPM: 138.5
2558 Male, age 74, both hemispheres 146.0
2095 Male, age 76, both hemispheres 136.0
2119 Male, age 80, both hemispheres 133.4
Parvicellular reticular nuclei, medullary
nTPM: 144.2
2091 Female, age 85, both hemispheres 153.3
2189 Female, age 91, both hemispheres 147.6
2181 Male, age 80, left hemisphere 131.7
Pedunculopontine tegmental nucleus
nTPM: 117.9
1921 Female, age 85, both hemispheres 129.3
2334 Male, age 80, both hemispheres 123.4
2338 Male, age 61, both hemispheres 101.0
Peritrigeminal nucleus
nTPM: 144.1
2067 Female, age 85, both hemispheres 157.8
2136 Male, age 76, both hemispheres 142.3
2179 Male, age 61, both hemispheres 132.2
Pontine nuclei
nTPM: 157.0
2787 Female, age 85, both hemispheres 223.3
1863 Male, age 55, unknown 198.1
2727 Male, age 61, right hemisphere 183.7
1968 Male, age 76, left hemisphere 165.2
2109 Female, age 72, unknown 159.7
2319 Female, age 91, both hemispheres 114.3
2115 Male, age 80, left hemisphere 113.5
2454 Male, age 74, left hemisphere 98.5
Pontine raphe nucleus
nTPM: 148.4
2122 Female, age 85, midline 170.5
2853 Male, age 76, midline 126.4
Posteroventral cochlear nucleus
nTPM: 116.8
2752 Female, age 85, both hemispheres 149.3
2070 Male, age 76, both hemispheres 118.9
2371 Male, age 61, both hemispheres 118.7
2341 Male, age 80, both hemispheres 100.5
2135 Female, age 91, both hemispheres 96.4
Prepositus hypoglossal nucleus
nTPM: 128.7
2855 Female, age 85, right hemisphere 132.4
2086 Male, age 80, both hemispheres 125.0
Principal sensory trigeminal nucleus
nTPM: 147.5
2158 Male, age 61, both hemispheres 202.0
2324 Male, age 76, both hemispheres 152.9
2008 Male, age 80, left hemisphere 142.8
2367 Female, age 91, left hemisphere 92.4
Reticular pontine nucleus, caudal
nTPM: 123.5
2092 Male, age 76, both hemispheres 147.4
2332 Male, age 80, right hemisphere 127.6
2457 Female, age 91, both hemispheres 112.2
2559 Male, age 74, both hemispheres 106.8
Reticular pontine nucleus, oral
nTPM: 137.7
2012 Female, age 85, both hemispheres 159.1
1939 Male, age 80, both hemispheres 147.9
2167 Male, age 76, both hemispheres 144.9
2366 Female, age 91, both hemispheres 121.5
2361 Male, age 74, both hemispheres 115.3
Reticulotegmental nucleus
nTPM: 128.9
2325 Male, age 76, both hemispheres 142.8
2452 Male, age 74, both hemispheres 139.0
2333 Male, age 80, both hemispheres 120.4
2322 Female, age 91, both hemispheres 113.5
Spinal trigeminal nucleus, caudal
nTPM: 132.7
2447 Male, age 76, both hemispheres 163.1
2390 Female, age 91, both hemispheres 162.8
2308 Male, age 80, both hemispheres 117.0
2642 Male, age 74, both hemispheres 112.6
2312 Male, age 61, both hemispheres 107.7
Spinal trigeminal nucleus, interpolar
nTPM: 155.0
2625 Male, age 61, both hemispheres 205.2
2066 Male, age 76, right hemisphere 169.6
2389 Female, age 91, both hemispheres 143.4
2033 Male, age 80, both hemispheres 128.6
2386 Female, age 85, both hemispheres 128.3
Spinal trigeminal nucleus, oral
nTPM: 129.3
2737 Female, age 85, both hemispheres 139.1
2164 Male, age 80, both hemispheres 127.2
1978 Male, age 76, both hemispheres 121.6
Spinal vestibular nucleus
nTPM: 136.6
2186 Female, age 91, both hemispheres 163.7
2806 Female, age 85, both hemispheres 138.8
2780 Male, age 80, both hemispheres 133.7
2796 Male, age 61, both hemispheres 133.6
2748 Male, age 76, both hemispheres 129.9
2384 Male, age 74, both hemispheres 119.8
Subcoeruleus area
nTPM: 134.1
2089 Male, age 76, left hemisphere 137.0
2323 Female, age 91, left hemisphere 136.5
2369 Female, age 85, left hemisphere 133.6
1958 Male, age 80, both hemispheres 133.1
2451 Male, age 74, both hemispheres 130.2
Superior olive
nTPM: 132.8
1875 Female, age 85, both hemispheres 166.6
2020 Male, age 76, both hemispheres 147.8
2364 Male, age 74, right hemisphere 129.9
2329 Male, age 80, right hemisphere 117.7
2561 Female, age 91, both hemispheres 102.0
Superior vestibular nucleus
nTPM: 123.1
2061 Male, age 76, both hemispheres 136.4
2015 Male, age 80, both hemispheres 126.1
2383 Male, age 74, both hemispheres 106.8
Ventral medullary reticular nucleus
nTPM: 112.6
2060 Male, age 76, both hemispheres 121.5
2372 Male, age 61, both hemispheres 103.7
Ventral periolivary nuclei
nTPM: 141.4
2130 Female, age 85, both hemispheres 189.0
2165 Male, age 80, both hemispheres 157.4
2023 Male, age 76, both hemispheres 123.0
2794 Female, age 91, left hemisphere 96.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 128.3
1986 Male, age 76, both hemispheres 144.9
2302 Female, age 91, both hemispheres 144.2
2741 Female, age 85, both hemispheres 143.0
2180 Male, age 61, both hemispheres 111.7
2118 Male, age 80, both hemispheres 97.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 129.9
2840 Female, age 85, both hemispheres 154.7
2449 Male, age 74, both hemispheres 148.8
1959 Male, age 76, both hemispheres 135.2
2161 Male, age 80, both hemispheres 129.2
2456 Female, age 91, both hemispheres 107.9
2359 Male, age 61, both hemispheres 103.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 192.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 172.7
FF:10182-103D2 60 years, female 209.9
FF:10165-103B3 76 years, female 135.5
Medulla oblongata
Scaled Tags Per Million: 172.7
FF:10174-103C3 60 years, female 230.6
FF:10038-101F2 18-64 years, mixed 150.9
FF:10155-103A2 76 years, female 136.8
Pons
Scaled Tags Per Million: 192.6
FF:10033-101E6 18-54 years, mixed 192.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 152.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 140.3
Samples: 4

Max nTPM: 159.5
Min nTPM: 118.5
Sample A Female 131.0
Sample B Female 159.5
Sample C Male 152.0
Sample D Male 118.5
Pons
nTPM: 152.8
Samples: 4

Max nTPM: 180.2
Min nTPM: 125.0
Sample A Female 180.2
Sample B Female 125.0
Sample C Male 133.9
Sample D Male 172.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 443.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 443.5
Samples: 4

Max nTPM: 455.7
Min nTPM: 432.8
Sample A Male 444.0
Sample B Male 432.8
Sample C Female 455.7
Sample D Female 441.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.7
67978674 Antisense, RP_040923_01_E08, Mouse strain C57BL/6J (56 days, male) 12.7
Pons
Expression energy: 12.3
67978674 Antisense, RP_040923_01_E08, Mouse strain C57BL/6J (56 days, male) 12.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org