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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:62.4 nTPM
HPA Brain:36.3 nTPM
GTEx:62.4 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:24.6 nTPM
Mouse:222.9 nTPM
Allen mouse:4.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030712
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

36.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 34.6
2481 Female, age 94, left hemisphere 47.7
1854 Male, age 80, left hemisphere 36.4
2290 Female, age 72, unknown 35.9
1857 Female, age 85, left hemisphere 35.2
1781 Male, age 74, unknown 32.5
2289 Male, age 61, right hemisphere 31.2
2846 Female, age 79, unknown 29.2
2288 Male, age 75, left hemisphere 28.4
Globus pallidus, externus
nTPM: 26.9
2646 Male, age 61, right hemisphere 36.7
2772 Female, age 79, unknown 29.3
1996 Male, age 80, right hemisphere 28.3
2395 Male, age 75, both hemispheres 26.5
2567 Female, age 72, unknown 13.6
Globus pallidus, internus
nTPM: 25.9
2483 Female, age 94, right hemisphere 47.4
2287 Male, age 75, right hemisphere 32.0
2778 Female, age 91, both hemispheres 24.9
1818 Male, age 74, unknown 23.2
2037 Male, age 80, right hemisphere 21.3
2566 Female, age 72, unknown 16.4
2111 Female, age 85, right hemisphere 15.9
Nucleus accumbens
nTPM: 35.9
1856 Female, age 91, right hemisphere 43.2
1783 Male, age 74, unknown 41.8
2824 Male, age 61, right hemisphere 41.3
2286 Male, age 75, left hemisphere 39.2
1806 Female, age 85, left hemisphere 35.3
2698 Female, age 72, unknown 31.3
2391 Female, age 94, left hemisphere 29.4
2732 Male, age 80, right hemisphere 25.4
Nucleus basalis of Meynert
nTPM: 30.1
2569 Male, age 61, both hemispheres 42.1
2484 Female, age 94, left hemisphere 28.4
2393 Male, age 80, right hemisphere 27.6
2821 Male, age 75, both hemispheres 22.6
Nucleus of the diagonal band
nTPM: 36.3
2775 Male, age 80, right hemisphere 44.6
1812 Female, age 91, both hemispheres 42.0
2029 Male, age 61, right hemisphere 34.8
2195 Female, age 85, both hemispheres 31.2
1979 Male, age 74, unknown 28.9
Putamen
nTPM: 30.7
2482 Female, age 94, left hemisphere 39.5
1937 Female, age 91, right hemisphere 35.6
2466 Female, age 79, unknown 35.5
1838 Male, age 80, right hemisphere 34.6
2647 Male, age 75, left hemisphere 25.7
1829 Male, age 74, unknown 23.6
2489 Female, age 72, unknown 20.8
Septal nuclei
nTPM: 31.7
1960 Male, age 74, unknown 40.4
2031 Female, age 72, unknown 39.3
2009 Female, age 91, both hemispheres 34.7
2059 Female, age 85, both hemispheres 30.5
2629 Female, age 94, right hemisphere 30.3
2199 Male, age 80, right hemisphere 25.8
2394 Male, age 61, left hemisphere 21.3
Stria terminalis, bed nucleus
nTPM: 32.8
1974 Female, age 91, both hemispheres 36.9
2486 Female, age 94, both hemispheres 32.6
2201 Male, age 74, unknown 28.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 55.3
Samples: 246

Max nTPM: 112.4
Min nTPM: 22.0
Std nTPM: 14.0
Median nTPM: 52.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 112.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 110.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 96.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 92.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 89.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 88.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 86.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 81.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 81.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 81.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 80.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 80.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 80.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 79.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 79.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 77.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 77.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 77.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 76.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 76.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 75.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 75.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 74.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 74.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 73.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 73.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 73.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 72.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 72.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 72.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 71.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 71.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 70.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 69.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 69.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 69.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 69.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 69.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 69.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 68.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 68.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 68.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 68.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 67.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 67.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 67.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 66.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 66.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 66.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 65.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 64.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 64.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 64.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 63.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 63.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 63.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 63.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 63.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 63.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 63.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 63.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 63.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 63.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 62.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 62.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 62.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 61.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 61.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 61.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 60.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 60.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 60.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 60.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 59.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 59.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 59.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 59.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 59.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 58.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 58.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 58.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 58.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 57.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 56.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 56.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 56.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 56.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 55.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 55.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 55.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 55.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 55.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 55.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 55.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 55.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 55.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 54.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 54.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 54.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 54.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 54.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 54.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 54.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 54.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 54.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 53.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 53.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 53.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 53.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 52.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 52.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 52.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 52.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 52.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 51.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 51.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 51.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 51.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 50.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 50.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 50.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 50.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 50.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 50.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 50.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 50.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 50.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 50.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 49.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 49.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 49.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 49.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 49.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 49.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 49.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 49.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 48.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 48.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 48.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 48.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 48.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 48.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 48.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 47.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 47.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 47.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 47.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 47.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 47.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 46.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 46.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 46.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 46.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 46.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 45.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 45.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 45.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 45.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 45.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 45.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 45.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 45.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 45.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 45.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 45.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 44.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 44.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 44.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 44.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 44.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 44.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 43.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 43.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 43.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 43.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 43.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 43.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 43.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 42.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 42.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 42.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 42.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 42.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 41.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 41.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 41.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 41.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 40.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 40.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 39.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 39.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 39.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 39.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 39.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 39.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 39.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 39.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 38.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 38.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 38.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 37.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 37.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 35.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 34.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 34.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 34.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 34.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 32.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 30.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 30.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 29.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 22.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 62.4
Samples: 246

Max nTPM: 118.7
Min nTPM: 23.6
Std nTPM: 14.6
Median nTPM: 61.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 118.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 106.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 105.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 101.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 97.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 96.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 95.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 94.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 91.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 91.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 91.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 90.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 89.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 89.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 88.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 87.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 86.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 85.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 84.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 83.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 83.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 83.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 82.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 82.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 81.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 81.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 80.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 80.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 80.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 79.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 79.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 78.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 78.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 77.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 77.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 76.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 76.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 76.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 75.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 75.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 75.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 75.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 74.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 73.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 73.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 72.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 72.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 72.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 72.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 71.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 71.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 71.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 71.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 70.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 70.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 70.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 70.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 70.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 70.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 70.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 69.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 69.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 69.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 69.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 69.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 68.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 68.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 68.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 68.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 68.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 68.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 68.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 68.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 68.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 67.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 67.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 67.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 66.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 66.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 66.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 66.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 66.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 66.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 66.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 66.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 66.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 65.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 65.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 65.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 65.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 65.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 65.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 65.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 65.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 65.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 65.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 64.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 64.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 64.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 64.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 64.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 64.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 64.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 64.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 64.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 64.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 64.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 63.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 63.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 63.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 63.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 62.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 62.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 62.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 62.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 62.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 61.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 61.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 61.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 61.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 61.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 60.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 60.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 60.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 60.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 60.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 60.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 60.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 60.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 60.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 60.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 60.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 60.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 59.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 59.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 59.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 59.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 59.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 59.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 59.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 58.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 58.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 58.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 58.8
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 58.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 58.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 58.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 58.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 57.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 57.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 57.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 57.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 56.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 56.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 56.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 56.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 56.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 56.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 56.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 55.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 55.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 55.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 55.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 55.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 55.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 54.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 54.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 54.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 54.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 53.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 53.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 53.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 53.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 53.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 53.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 53.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 52.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 52.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 52.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 52.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 52.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 52.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 51.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 51.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 51.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 51.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 51.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 51.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 51.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 51.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 50.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 50.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 50.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 50.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 50.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 50.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 50.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 49.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 49.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 49.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 48.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 48.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 48.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 48.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 48.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 48.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 47.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 47.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 46.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 46.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 46.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 45.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 45.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 44.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 44.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 44.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 44.2
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 43.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 43.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 42.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 42.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 42.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 41.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 40.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 39.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 39.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 38.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 38.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 36.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 35.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 35.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 30.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 30.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 29.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 27.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 23.6
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Brain - Putamen (basal ganglia)
Average nTPM: 56.2
Samples: 205

Max nTPM: 108.3
Min nTPM: 29.6
Std nTPM: 13.1
Median nTPM: 54.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 108.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 90.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 89.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 87.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 86.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 86.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 84.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 84.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 82.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 81.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 80.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 79.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 79.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 78.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 78.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 77.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 76.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 75.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 75.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 75.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 74.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 74.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 73.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 73.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 72.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 71.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 71.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 70.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 69.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 68.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 68.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 68.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 67.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 66.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 66.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 66.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 66.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 66.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 65.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 65.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 65.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 65.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 65.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 64.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 64.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 64.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 64.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 64.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 64.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 63.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 63.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 63.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 62.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 62.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 62.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 61.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 61.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 61.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 61.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 61.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 60.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 60.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 60.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 59.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 59.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 59.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 59.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 58.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 58.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 58.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 58.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 57.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 57.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 57.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 57.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 57.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 57.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 57.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 57.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 57.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 56.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 56.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 55.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 55.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 55.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 55.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 54.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 54.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 54.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 54.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 54.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 54.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 54.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 53.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 53.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 53.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 53.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 52.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 52.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 52.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 52.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 52.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 52.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 52.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 51.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 51.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 51.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 51.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 51.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 51.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 51.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 51.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 50.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 50.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 50.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 49.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 49.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 49.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 49.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 49.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 49.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 48.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 48.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 48.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 48.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 48.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 48.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 47.9
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 47.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 47.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 47.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 47.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 47.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 47.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 47.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 46.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 46.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 46.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 45.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 45.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 45.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 45.6
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 45.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 45.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 45.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 45.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 45.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 44.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 44.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 44.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 44.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 42.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 42.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 42.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 42.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 42.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 41.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 41.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 41.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 41.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 40.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 40.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 40.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 40.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 39.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 39.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 39.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 39.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 38.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 38.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 38.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 37.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 37.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 37.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 37.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 36.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 34.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 32.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 32.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 31.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 29.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 45.9
FF:10164-103B2 76 years, female 45.9
Nucleus accumbens
Scaled Tags Per Million: 39.9
FF:10037-101F1 23-56 years, mixed 39.9
Putamen
Scaled Tags Per Million: 42.1
FF:10176-103C5 60 years, female 42.1
Globus pallidus
Scaled Tags Per Million: 22.8
FF:10175-103C4 60 years, female 25.1
FF:10161-103A8 76 years, female 20.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.6
Pig sample Sample description nTPM
Caudate
nTPM: 20.7
Samples: 4

Max nTPM: 23.2
Min nTPM: 17.3
Sample A Female 19.7
Sample B Female 22.5
Sample C Male 23.2
Sample D Male 17.3
Putamen
nTPM: 24.4
Samples: 4

Max nTPM: 29.2
Min nTPM: 17.3
Sample A Female 28.5
Sample B Female 17.3
Sample C Male 22.6
Sample D Male 29.2
Septum
nTPM: 22.6
Samples: 4

Max nTPM: 25.4
Min nTPM: 18.9
Sample A Female 24.7
Sample B Female 18.9
Sample C Male 21.2
Sample D Male 25.4
Ventral pallidum
nTPM: 24.6
Samples: 4

Max nTPM: 29.5
Min nTPM: 17.1
Sample A Female 17.1
Sample B Female 24.3
Sample C Male 27.6
Sample D Male 29.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

222.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 193.3
Samples: 4

Max nTPM: 202.5
Min nTPM: 183.1
Sample A Male 186.4
Sample B Male 202.5
Sample C Female 183.1
Sample D Female 201.2
Septum
nTPM: 185.2
Samples: 4

Max nTPM: 199.1
Min nTPM: 159.8
Sample A Male 189.9
Sample B Male 191.9
Sample C Female 199.1
Sample D Female 159.8
Ventral forebrain
nTPM: 222.9
Samples: 4

Max nTPM: 256.2
Min nTPM: 200.5
Sample A Male 213.8
Sample B Male 200.5
Sample C Female 256.2
Sample D Female 221.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.3
67936010 Antisense, RP_041102_01_A04, Mouse strain C57BL/6J (56 days, male) 4.3
71735835 Antisense, RP_051010_03_C09, Mouse strain C57BL/6J (56 days, male) 4.3
Pallidum
Expression energy: 4.0
67936010 Antisense, RP_041102_01_A04, Mouse strain C57BL/6J (56 days, male) 4.4
71735835 Antisense, RP_051010_03_C09, Mouse strain C57BL/6J (56 days, male) 3.7

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