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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Medium
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:79.5 nTPM
HPA Brain:167.6 nTPM
GTEx:79.5 nTPM
FANTOM5:153.4 Scaled Tags Per Million
Pig:73.4 nTPM
Mouse:173.0 nTPM
Allen mouse:3.8 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003040
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Medium
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

167.6
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 125.3
2003 Female, age 85, right hemisphere 188.9
1769 Male, age 76, right hemisphere 153.4
1768 Female, age 72, unknown 121.9
2055 Female, age 91, right hemisphere 121.7
2006 Male, age 61, right hemisphere 115.9
1788 Male, age 55, unknown 108.6
2101 Male, age 74, right hemisphere 98.0
1774 Male, age 80, left hemisphere 93.6
Cerebellar nuclei
nTPM: 167.6
2175 Male, age 61, right hemisphere 214.7
2783 Female, age 72, unknown 212.0
2882 Male, age 76, left hemisphere 183.3
1966 Female, age 91, left hemisphere 175.8
1871 Male, age 74, unknown 170.0
2177 Female, age 85, both hemispheres 169.4
2005 Male, age 80, left hemisphere 155.9
1879 Male, age 55, unknown 147.4
2318 Male, age 74, left hemisphere 79.7
Flocculonodular lobe
nTPM: 103.1
1792 Male, age 74, unknown 140.9
1765 Male, age 55, unknown 129.9
2176 Female, age 91, right hemisphere 117.1
1767 Male, age 76, left hemisphere 107.9
1835 Female, age 85, right hemisphere 81.0
1771 Male, age 80, left hemisphere 75.0
2004 Male, age 61, right hemisphere 69.7
Vermis
nTPM: 99.7
1770 Male, age 76, left hemisphere 126.0
1778 Female, age 91, left hemisphere 122.5
2834 Male, age 80, left hemisphere 112.2
1928 Female, age 72, unknown 103.8
1751 Male, age 74, right hemisphere 103.3
1825 Male, age 74, unknown 93.1
1766 Male, age 55, unknown 86.0
2460 Male, age 61, both hemispheres 78.9
1988 Female, age 85, left hemisphere 71.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.5
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 48.1
Samples: 215

Max nTPM: 238.2
Min nTPM: 6.1
Std nTPM: 32.5
Median nTPM: 42.1
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 238.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 237.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 208.3
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 138.6
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 137.9
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 124.9
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 120.6
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 111.3
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 98.5
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 96.0
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 96.0
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 94.2
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 91.8
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 91.1
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 87.8
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 86.5
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 86.4
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 85.7
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 84.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 83.5
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 81.6
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 80.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 78.1
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 77.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 77.2
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 76.3
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 76.1
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 75.0
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 74.4
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 74.3
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 73.3
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 73.1
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 71.5
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 71.2
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 70.9
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 68.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 68.7
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 68.4
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 68.3
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 67.5
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 67.4
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 66.5
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 66.1
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 65.2
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 65.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 64.6
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 64.2
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 63.7
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 63.6
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 63.4
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 62.8
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 61.2
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 60.8
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 60.1
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 59.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 58.5
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 58.2
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 58.1
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 57.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 57.8
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 57.4
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 57.3
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 56.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 56.2
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 55.6
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 54.2
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 54.1
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 54.0
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 53.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 53.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 53.5
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 53.0
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 52.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 52.8
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 52.5
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 52.3
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 52.0
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 51.3
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 50.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 50.1
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 49.8
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 49.4
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 49.2
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 48.8
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 48.7
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 48.7
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 48.5
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 48.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 47.6
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 47.6
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 47.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 47.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 47.0
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 46.8
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 46.6
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 46.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 46.1
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 45.8
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 45.5
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 45.4
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 44.7
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 44.4
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 44.2
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 43.8
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 43.7
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 43.2
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 43.0
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 42.1
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 41.4
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 41.2
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 40.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 40.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 39.8
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 39.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 39.2
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 39.1
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 39.0
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 39.0
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 39.0
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 39.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 38.8
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 38.8
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 38.4
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 38.0
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 38.0
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 37.7
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 37.5
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 37.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 36.7
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 36.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 36.2
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 35.7
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 35.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 35.6
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 35.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 35.1
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 34.5
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 34.2
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 33.8
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 33.6
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 33.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 33.0
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 32.9
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 32.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 32.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 32.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 32.0
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 31.5
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 30.6
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 30.6
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 30.4
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 30.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 30.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 30.0
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 29.6
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 29.6
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 29.5
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 29.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 29.3
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 28.6
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 28.6
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 27.6
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 26.9
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 26.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 25.9
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 25.9
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 25.5
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 25.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 25.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 25.0
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 24.8
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 24.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 24.0
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 24.0
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 23.4
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 23.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 23.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 22.2
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 22.2
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 22.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 21.8
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 21.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 21.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 20.6
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 20.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 20.2
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 20.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 19.9
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 19.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 18.4
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 17.9
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 17.7
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 17.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 17.3
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 16.9
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 16.8
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 16.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 16.3
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 16.0
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 15.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 15.8
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 15.2
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 14.7
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 13.3
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 12.7
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 12.0
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 11.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 10.9
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 10.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 10.2
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 9.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 8.4
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 8.4
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 8.3
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 6.1
Show allShow less
Brain - Cerebellum
Average nTPM: 79.5
Samples: 241

Max nTPM: 228.2
Min nTPM: 4.6
Std nTPM: 34.8
Median nTPM: 76.7
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 228.2
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 217.9
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 202.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 197.1
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 180.8
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 173.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 149.0
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 148.6
GTEX-144GL-2926-SM-5O99F 50-59 years, male 140.1
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 138.1
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 134.8
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 131.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 130.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 128.7
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 128.6
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 128.1
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 126.6
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 125.3
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 125.1
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 123.5
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 122.9
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 122.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 120.8
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 120.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 119.1
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 119.0
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 117.6
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 116.9
GTEX-11ONC-3026-SM-5985W 60-69 years, male 116.4
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 115.3
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 115.1
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 114.8
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 114.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 114.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 113.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 113.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 112.7
GTEX-17HII-2926-SM-79OMK 50-59 years, male 112.3
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 111.7
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 109.0
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 108.8
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 108.3
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 106.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 106.7
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 106.5
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 106.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 105.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 105.6
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 105.6
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 104.6
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 104.6
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 104.2
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 104.0
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 101.7
GTEX-12126-0926-SM-5FQTW 20-29 years, male 101.5
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 101.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 101.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 101.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 100.2
GTEX-RU72-2926-SM-2TF66 50-59 years, female 100.1
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 98.4
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 98.3
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 98.1
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 97.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 97.3
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 97.0
GTEX-11EI6-2926-SM-5985U 60-69 years, male 96.5
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 96.4
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 94.6
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 94.5
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 94.2
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 93.9
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 93.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 93.8
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 93.0
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 92.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 92.9
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 92.6
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 92.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 92.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 92.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 91.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 90.5
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 90.1
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 89.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 88.9
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 88.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 88.2
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 88.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 88.0
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 87.1
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 87.1
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 86.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 86.8
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 86.2
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 86.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 85.8
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 85.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 84.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 84.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 83.9
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 83.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 82.9
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 82.7
GTEX-11DYG-2926-SM-5H132 60-69 years, male 82.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 82.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 81.5
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 81.5
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 80.9
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 80.1
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 79.9
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 79.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 79.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 78.5
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 78.4
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 78.3
GTEX-13112-2926-SM-5DUWT 50-59 years, male 77.6
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 77.3
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 77.0
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 77.0
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 76.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 76.6
GTEX-X261-3126-SM-4PQZC 50-59 years, male 76.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 75.8
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 75.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 75.2
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 74.6
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 74.5
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 74.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 73.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 73.2
GTEX-18465-2926-SM-7KFSE 50-59 years, male 72.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 72.7
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 72.4
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 71.2
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 71.1
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 70.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 70.7
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 70.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 70.5
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 70.4
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 70.0
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 69.6
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 68.9
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 68.7
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 68.6
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 68.1
GTEX-11NUK-3026-SM-5986K 50-59 years, male 67.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 67.6
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 67.5
GTEX-15G19-2826-SM-6M48K 60-69 years, male 67.4
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 66.5
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 66.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 66.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 65.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 65.1
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 63.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 63.9
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 63.6
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 63.4
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 62.7
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 62.7
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 62.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 62.4
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 62.0
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 61.8
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 61.6
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 61.0
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 60.4
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 60.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 60.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 59.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 58.4
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 58.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 57.8
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 57.8
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 57.8
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 57.7
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 57.3
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 56.8
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 56.5
GTEX-1192X-3226-SM-5987D 50-59 years, male 56.4
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 56.1
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 54.9
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 54.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 54.2
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 54.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 54.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 53.7
GTEX-17EVP-2926-SM-793BU 40-49 years, male 53.3
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 52.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 52.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 52.5
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 52.4
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 52.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 51.7
GTEX-14E6D-2926-SM-664OP 50-59 years, male 51.4
GTEX-1B933-3026-SM-731DB 50-59 years, female 50.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 49.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 48.7
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 47.4
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 46.3
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 46.1
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 45.6
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 45.4
GTEX-145LS-3026-SM-5O99S 60-69 years, female 45.3
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 45.1
GTEX-14PN4-3026-SM-664O4 50-59 years, male 44.4
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 43.9
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 42.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 42.6
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 42.6
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 42.0
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 39.4
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 37.6
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 37.4
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 37.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 36.2
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 36.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 34.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 33.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 33.6
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 32.9
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 32.1
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 32.0
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 31.1
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 31.1
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 30.9
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 30.6
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 30.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 30.0
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 26.3
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 25.9
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 24.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 22.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 21.7
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 18.2
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 15.1
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 14.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 9.9
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 4.6
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

153.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 153.4
FF:10083-102B2 22-68 years, mixed 170.8
FF:10166-103B4 76 years, female 136.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

73.4
Pig sample Sample description nTPM
Cerebellum
nTPM: 73.4
Samples: 4

Max nTPM: 128.2
Min nTPM: 45.9
Sample A Female 128.2
Sample B Female 59.7
Sample C Male 45.9
Sample D Male 59.9

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.0
Mouse sample Sample description nTPM
Cerebellum
nTPM: 173.0
Samples: 4

Max nTPM: 181.6
Min nTPM: 164.2
Sample A Male 176.8
Sample B Male 181.6
Sample C Female 169.2
Sample D Female 164.2

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.8
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 3.8
1771 Antisense, RP_040526_02_G02, Mouse strain C57BL/6J (56 days, male) 3.8
1770 Antisense, RP_040526_02_G02, Mouse strain C57BL/6J (56 days, male) 3.7

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