HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:114.2 nTPM
HPA Brain:194.0 nTPM
GTEx:114.2 nTPM
FANTOM5:244.8 Scaled Tags Per Million
Pig:144.3 nTPM
Mouse:142.4 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003040
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 194.0
Sample id Sample description nTPM
Hippocampus
nTPM: 194.0
2529 Female, age 94, left hemisphere 227.1
2148 Female, age 91, left hemisphere 224.3
1898 Male, age 80, left hemisphere 195.6
1855 Male, age 76, left hemisphere 185.4
1911 Female, age 85, right hemisphere 184.5
2621 Female, age 67, right hemisphere 146.8
Dentate gyrus
nTPM: 165.0
2528 Male, age 74, both hemispheres 216.9
2010 Male, age 76, both hemispheres 167.3
2530 Female, age 94, left hemisphere 164.3
2246 Female, age 85, both hemispheres 160.3
1927 Female, age 91, both hemispheres 141.0
2531 Female, age 67, both hemispheres 140.5
Entorhinal gyrus
nTPM: 170.0
2117 Female, age 91, right hemisphere 273.3
2686 Male, age 75, right hemisphere 182.4
1938 Female, age 85, left hemisphere 174.2
1787 Male, age 76, left hemisphere 147.6
2764 Male, age 80, right hemisphere 130.5
2613 Female, age 94, left hemisphere 112.0
Hippocampus, CA1
nTPM: 143.2
1873 Female, age 85, both hemispheres 183.8
2527 Male, age 74, both hemispheres 172.9
2082 Female, age 91, right hemisphere 170.0
2045 Male, age 76, both hemispheres 117.4
2749 Male, age 80, left hemisphere 71.9
Hippocampus, CA2
nTPM: 150.4
2113 Female, age 91, right hemisphere 183.6
1940 Female, age 85, left hemisphere 164.6
1963 Male, age 80, left hemisphere 153.9
2249 Male, age 74, both hemispheres 151.4
2437 Female, age 94, left hemisphere 151.0
1892 Male, age 76, both hemispheres 98.2
Hippocampus, CA3
nTPM: 153.2
2861 Female, age 67, both hemispheres 234.3
2620 Female, age 94, left hemisphere 181.7
1891 Female, age 85, both hemispheres 173.2
2436 Male, age 74, both hemispheres 125.0
1867 Male, age 76, both hemispheres 115.4
2137 Male, age 80, left hemisphere 89.7
Parahippocampal cortex
nTPM: 141.5
2692 Male, age 74, both hemispheres 192.3
2622 Female, age 67, right hemisphere 170.9
1933 Female, age 85, both hemispheres 164.2
1990 Female, age 91, right hemisphere 141.5
2250 Female, age 67, right hemisphere 139.3
2018 Male, age 76, both hemispheres 134.0
2245 Female, age 91, both hemispheres 132.5
1850 Male, age 80, both hemispheres 131.7
2693 Female, age 94, both hemispheres 104.5
2532 Female, age 72, left hemisphere 104.4
Perirhinal gyrus
nTPM: 119.2
1847 Female, age 91, left hemisphere 146.2
1794 Male, age 80, right hemisphere 137.1
1841 Female, age 85, right hemisphere 111.4
2521 Female, age 94, right hemisphere 109.9
2848 Male, age 76, right hemisphere 91.6
Subiculum
nTPM: 168.8
2729 Female, age 91, right hemisphere 270.4
2619 Male, age 74, both hemispheres 193.5
2042 Male, age 76, both hemispheres 150.9
1977 Female, age 85, both hemispheres 136.5
2438 Female, age 94, left hemisphere 131.5
1901 Male, age 80, both hemispheres 129.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 114.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 114.2
Samples: 197

Max nTPM: 295.4
Min nTPM: 13.6
Std nTPM: 52.8
Median nTPM: 107.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 295.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 289.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 259.5
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 228.2
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 227.9
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 221.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 219.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 214.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 213.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 212.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 210.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 244.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 244.8
FF:10153-102I9 76 years, female 250.7
FF:10169-103B7 60 years, female 238.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 144.3
Pig sample Sample description nTPM
Subiculum
nTPM: 144.4
Samples: 4

Max nTPM: 177.1
Min nTPM: 114.6
Sample A Female 177.1
Sample B Female 146.3
Sample C Male 139.4
Sample D Male 114.6
Dorsal hippocampus
nTPM: 102.5
Samples: 4

Max nTPM: 106.4
Min nTPM: 93.2
Sample A Female 106.4
Sample B Female 93.2
Sample C Male 104.9
Sample D Male 105.4
Entorhinal cortex
nTPM: 138.8
Samples: 4

Max nTPM: 157.2
Min nTPM: 115.3
Sample A Female 132.8
Sample B Female 149.7
Sample C Male 157.2
Sample D Male 115.3
Ventral hippocampus
nTPM: 135.3
Samples: 4

Max nTPM: 199.0
Min nTPM: 98.9
Sample A Female 124.0
Sample B Female 119.1
Sample C Male 199.0
Sample D Male 98.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 142.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 142.5
Samples: 4

Max nTPM: 159.3
Min nTPM: 129.3
Sample A Male 144.0
Sample B Male 129.3
Sample C Female 159.3
Sample D Female 137.3
Hippocampal formation
nTPM: 140.7
Samples: 4

Max nTPM: 155.2
Min nTPM: 125.5
Sample A Male 155.2
Sample B Male 125.5
Sample C Female 131.5
Sample D Female 150.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
1770 Antisense, RP_040526_02_G02, Mouse strain C57BL/6J (56 days, male) 5.4
1771 Antisense, RP_040526_02_G02, Mouse strain C57BL/6J (56 days, male) 3.9

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