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  • PSMA3
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:46.1 nTPM
HPA Brain:30.0 nTPM
GTEx:46.1 nTPM
FANTOM5:59.5 Scaled Tags Per Million
Pig:64.9 nTPM
Mouse:31.6 nTPM
Allen mouse:11.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000905
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.1
2481 Female, age 94, left hemisphere 44.5
2846 Female, age 79, unknown 32.6
1857 Female, age 85, left hemisphere 29.4
1854 Male, age 80, left hemisphere 29.3
2290 Female, age 72, unknown 28.4
2288 Male, age 75, left hemisphere 24.7
1781 Male, age 74, unknown 23.2
2289 Male, age 61, right hemisphere 20.3
Globus pallidus, externus
nTPM: 24.1
2772 Female, age 79, unknown 36.0
2395 Male, age 75, both hemispheres 31.0
1996 Male, age 80, right hemisphere 29.9
2646 Male, age 61, right hemisphere 13.1
2567 Female, age 72, unknown 10.5
Globus pallidus, internus
nTPM: 24.9
2287 Male, age 75, right hemisphere 32.8
2483 Female, age 94, right hemisphere 29.7
1818 Male, age 74, unknown 29.2
2778 Female, age 91, both hemispheres 27.6
2037 Male, age 80, right hemisphere 25.2
2111 Female, age 85, right hemisphere 17.9
2566 Female, age 72, unknown 12.0
Nucleus accumbens
nTPM: 30.0
2391 Female, age 94, left hemisphere 40.1
1856 Female, age 91, right hemisphere 35.8
2698 Female, age 72, unknown 34.5
2286 Male, age 75, left hemisphere 30.4
1806 Female, age 85, left hemisphere 27.3
2824 Male, age 61, right hemisphere 25.3
1783 Male, age 74, unknown 25.1
2732 Male, age 80, right hemisphere 21.6
Nucleus basalis of Meynert
nTPM: 22.7
2393 Male, age 80, right hemisphere 27.3
2484 Female, age 94, left hemisphere 25.9
2821 Male, age 75, both hemispheres 25.6
2569 Male, age 61, both hemispheres 12.0
Nucleus of the diagonal band
nTPM: 26.4
1812 Female, age 91, both hemispheres 34.4
2775 Male, age 80, right hemisphere 26.8
1979 Male, age 74, unknown 23.9
2029 Male, age 61, right hemisphere 23.7
2195 Female, age 85, both hemispheres 23.4
Putamen
nTPM: 25.7
1838 Male, age 80, right hemisphere 33.1
2482 Female, age 94, left hemisphere 33.1
1937 Female, age 91, right hemisphere 30.4
2466 Female, age 79, unknown 29.2
1829 Male, age 74, unknown 25.8
2647 Male, age 75, left hemisphere 15.1
2489 Female, age 72, unknown 12.9
Septal nuclei
nTPM: 23.6
2031 Female, age 72, unknown 32.8
1960 Male, age 74, unknown 24.6
2009 Female, age 91, both hemispheres 24.1
2629 Female, age 94, right hemisphere 24.1
2199 Male, age 80, right hemisphere 22.5
2394 Male, age 61, left hemisphere 18.8
2059 Female, age 85, both hemispheres 18.0
Stria terminalis, bed nucleus
nTPM: 22.5
1974 Female, age 91, both hemispheres 25.2
2486 Female, age 94, both hemispheres 22.2
2201 Male, age 74, unknown 20.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 43.8
Samples: 246

Max nTPM: 86.0
Min nTPM: 26.9
Std nTPM: 10.3
Median nTPM: 42.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 86.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 85.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 84.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 82.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 72.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 71.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 71.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 68.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 68.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 65.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 64.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 62.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 62.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 61.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 60.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 58.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 58.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 58.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 56.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 56.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 55.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 54.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 54.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 54.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 54.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 53.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 53.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 53.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 53.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 53.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 52.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 52.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 52.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 52.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 52.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 52.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 51.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 51.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 51.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 51.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 50.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 50.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 50.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 50.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 50.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 49.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 49.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 48.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 48.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 48.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 48.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 48.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 47.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 47.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 47.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 47.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 46.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 46.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 46.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 46.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 46.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 46.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 46.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 46.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 45.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 45.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 45.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 45.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 45.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 45.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 44.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 44.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 44.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 44.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 44.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 44.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 44.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 44.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 44.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 44.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 44.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 43.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 43.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 43.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 43.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 43.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 43.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 43.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 43.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 43.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 43.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 43.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 43.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 43.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 43.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 42.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 42.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 42.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 42.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 42.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 42.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 42.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 42.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 42.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 42.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 42.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 42.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 42.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 41.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 41.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 41.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 40.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 40.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 40.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 40.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 40.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 40.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 40.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 40.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 40.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 40.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 40.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 40.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 40.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 40.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 40.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 39.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 39.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 39.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 39.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 39.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 39.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 39.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 39.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 38.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 38.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 38.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 38.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 38.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 38.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 38.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 38.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 38.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 38.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 38.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 38.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 37.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 37.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 37.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 37.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 37.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 37.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 37.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 37.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 37.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 37.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 37.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 36.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 36.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 36.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 36.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 36.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 36.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 36.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 36.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 36.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 36.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 36.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 36.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 36.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 36.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 35.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 35.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 35.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 35.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 35.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 35.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 35.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 35.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 34.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 34.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 34.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 34.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 34.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 34.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 34.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 33.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 33.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 33.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 33.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 33.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 33.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 33.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 32.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 31.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 31.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 31.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 31.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 31.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 30.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 30.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 30.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 29.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 29.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 29.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 29.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 28.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 28.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 28.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 28.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 27.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 26.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.6
Samples: 246

Max nTPM: 100.1
Min nTPM: 25.0
Std nTPM: 10.1
Median nTPM: 43.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 100.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 91.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 89.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 86.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 85.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 74.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 66.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 64.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 64.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 62.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 62.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 58.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 58.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 57.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 56.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 56.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 56.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 56.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 56.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 55.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 54.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 54.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 54.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 53.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 53.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 53.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 53.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 53.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 52.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 52.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 52.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 52.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 52.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 52.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 52.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 51.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 51.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 51.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 51.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 51.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 51.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 51.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 51.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 51.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 51.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 51.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 50.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 50.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 50.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 49.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 49.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 49.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 49.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 49.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 49.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 49.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 49.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 49.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 49.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 48.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 48.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 48.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 48.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 48.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 48.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 47.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 47.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 47.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 47.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 47.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 47.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 46.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 46.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 46.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 46.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 46.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 46.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 45.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 45.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 45.9
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 45.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 45.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 45.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 45.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 45.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 45.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 45.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 45.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 45.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 45.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 45.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 45.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 44.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 44.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 44.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 44.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 44.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 44.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 44.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 44.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 44.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 43.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 43.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 43.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 43.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 43.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 43.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 43.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 43.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 43.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 43.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 42.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 42.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 42.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 42.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 42.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 42.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 42.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 42.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 42.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 41.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 41.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 41.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 41.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 41.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 41.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 41.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 41.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 41.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 41.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 41.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 41.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 40.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 40.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 40.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 40.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 40.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 40.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 40.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 40.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 39.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 39.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 39.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 39.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 39.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 39.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 39.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 39.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 39.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 39.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 39.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 39.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 39.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 39.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 39.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 39.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 38.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 38.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 38.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 38.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 38.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 38.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 38.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 38.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 38.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 38.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 38.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 38.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 38.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 38.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 38.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 37.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 37.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 37.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 37.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 37.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 37.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 37.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 37.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 37.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 37.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 37.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 37.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 37.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 37.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 36.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 36.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 36.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 36.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 36.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 36.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 36.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 36.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 35.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 35.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 35.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 35.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 35.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 35.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 35.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 34.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 34.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 34.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 34.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 34.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 34.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 34.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 34.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 34.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 33.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 33.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 33.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 33.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 33.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 33.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 32.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 32.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 32.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 32.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 31.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 31.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 31.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 31.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 31.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 31.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 29.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 26.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 25.0
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Brain - Putamen (basal ganglia)
Average nTPM: 46.1
Samples: 205

Max nTPM: 82.7
Min nTPM: 26.9
Std nTPM: 9.7
Median nTPM: 44.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 82.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 80.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 79.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 70.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 69.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 67.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 67.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 65.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 64.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 64.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 64.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 63.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 62.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 61.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 61.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 61.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 59.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 59.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 59.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 59.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 58.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 58.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 58.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 58.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 58.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 57.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 57.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 57.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 57.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 57.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 56.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 56.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 56.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 54.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 54.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 54.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 54.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 53.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 52.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 52.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 52.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 52.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 52.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 51.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 51.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 51.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 51.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 50.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 50.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 50.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 50.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 50.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 49.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 49.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 49.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 49.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 49.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 49.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 49.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 49.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 49.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 48.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 48.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 48.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 47.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 47.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 47.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 47.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 47.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 47.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 47.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 47.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 47.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 47.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 47.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 47.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 46.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 46.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 46.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 46.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 46.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 46.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 46.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 46.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 46.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 46.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 46.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 45.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 45.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 45.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 45.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 45.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 45.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 45.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 45.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 44.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 44.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 44.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 44.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 43.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 43.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 43.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 43.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 43.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 43.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 43.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 42.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 42.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 42.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 42.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 42.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 42.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 41.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 41.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 41.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 41.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 41.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 41.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 41.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 41.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 41.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 40.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 40.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 40.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 40.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 40.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 40.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 40.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 40.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 40.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 40.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 40.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 40.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 40.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 40.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 40.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 40.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 39.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 39.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 39.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 39.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 39.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 39.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 39.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 39.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 39.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 39.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 38.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 38.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 38.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 38.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 38.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 38.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 38.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 38.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 37.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 37.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 37.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 37.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 37.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 37.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 36.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 36.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 36.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 36.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 36.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 36.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 35.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 35.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 35.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 35.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 35.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 35.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 35.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 35.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 35.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 35.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 34.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 34.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 34.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 34.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 34.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 34.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 34.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 34.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 33.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 33.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 33.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 33.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 33.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 32.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 32.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 32.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 32.1
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 29.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 26.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

59.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 51.6
FF:10164-103B2 76 years, female 51.6
Nucleus accumbens
Scaled Tags Per Million: 48.5
FF:10037-101F1 23-56 years, mixed 48.5
Putamen
Scaled Tags Per Million: 59.5
FF:10176-103C5 60 years, female 59.5
Globus pallidus
Scaled Tags Per Million: 59.1
FF:10175-103C4 60 years, female 75.3
FF:10161-103A8 76 years, female 42.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

64.9
Pig sample Sample description nTPM
Caudate
nTPM: 48.2
Samples: 4

Max nTPM: 50.2
Min nTPM: 44.7
Sample A Female 48.6
Sample B Female 49.4
Sample C Male 50.2
Sample D Male 44.7
Putamen
nTPM: 64.9
Samples: 4

Max nTPM: 80.1
Min nTPM: 51.6
Sample A Female 67.5
Sample B Female 51.6
Sample C Male 80.1
Sample D Male 60.5
Septum
nTPM: 59.9
Samples: 4

Max nTPM: 66.2
Min nTPM: 54.3
Sample A Female 60.2
Sample B Female 54.3
Sample C Male 66.2
Sample D Male 58.9
Ventral pallidum
nTPM: 55.2
Samples: 4

Max nTPM: 62.1
Min nTPM: 47.7
Sample A Female 47.7
Sample B Female 60.2
Sample C Male 62.1
Sample D Male 50.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

31.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 26.6
Samples: 4

Max nTPM: 32.6
Min nTPM: 19.8
Sample A Male 19.8
Sample B Male 25.5
Sample C Female 32.6
Sample D Female 28.5
Septum
nTPM: 31.6
Samples: 4

Max nTPM: 37.3
Min nTPM: 25.9
Sample A Male 32.2
Sample B Male 37.3
Sample C Female 25.9
Sample D Female 31.1
Ventral forebrain
nTPM: 23.0
Samples: 4

Max nTPM: 25.5
Min nTPM: 18.6
Sample A Male 25.5
Sample B Male 18.6
Sample C Female 24.2
Sample D Female 23.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.4
69817402 Antisense, RP_050510_03_C11, Mouse strain C57BL/6J (56 days, male) 11.4
Pallidum
Expression energy: 10.2
69817402 Antisense, RP_050510_03_C11, Mouse strain C57BL/6J (56 days, male) 10.2

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