HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:56.6 nTPM
HPA Brain:109.8 nTPM
GTEx:56.6 nTPM
FANTOM5:105.4 Scaled Tags Per Million
Pig:98.4 nTPM
Mouse:108.8 nTPM
Allen mouse:16.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017369Antibody CAB000023Antibody CAB040544Antibody CAB055506Antibody CAB058688
Glial cells Not detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells LowNot detectedLowNot detectedMedium











HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 109.8
Sample id Sample description nTPM
Hippocampus
nTPM: 54.9
2148 Female, age 91, left hemisphere 80.6
1855 Male, age 76, left hemisphere 76.8
2621 Female, age 67, right hemisphere 71.2
1898 Male, age 80, left hemisphere 60.5
1911 Female, age 85, right hemisphere 26.7
2529 Female, age 94, left hemisphere 13.5
Dentate gyrus
nTPM: 52.7
2010 Male, age 76, both hemispheres 108.3
1927 Female, age 91, both hemispheres 105.0
2530 Female, age 94, left hemisphere 40.5
2246 Female, age 85, both hemispheres 33.1
2531 Female, age 67, both hemispheres 18.9
2528 Male, age 74, both hemispheres 10.4
Entorhinal gyrus
nTPM: 109.8
2613 Female, age 94, left hemisphere 162.7
2686 Male, age 75, right hemisphere 131.7
1938 Female, age 85, left hemisphere 119.5
2764 Male, age 80, right hemisphere 102.1
1787 Male, age 76, left hemisphere 99.0
2117 Female, age 91, right hemisphere 43.9
Hippocampus, CA1
nTPM: 65.3
2749 Male, age 80, left hemisphere 144.0
2045 Male, age 76, both hemispheres 64.3
2527 Male, age 74, both hemispheres 57.4
1873 Female, age 85, both hemispheres 37.2
2082 Female, age 91, right hemisphere 23.5
Hippocampus, CA2
nTPM: 50.0
1892 Male, age 76, both hemispheres 84.5
1963 Male, age 80, left hemisphere 69.0
2437 Female, age 94, left hemisphere 63.2
1940 Female, age 85, left hemisphere 30.1
2249 Male, age 74, both hemispheres 26.9
2113 Female, age 91, right hemisphere 26.0
Hippocampus, CA3
nTPM: 41.2
1867 Male, age 76, both hemispheres 82.6
2861 Female, age 67, both hemispheres 41.8
1891 Female, age 85, both hemispheres 40.7
2137 Male, age 80, left hemisphere 39.5
2436 Male, age 74, both hemispheres 23.8
2620 Female, age 94, left hemisphere 19.0
Parahippocampal cortex
nTPM: 89.1
1990 Female, age 91, right hemisphere 148.7
2622 Female, age 67, right hemisphere 128.7
1850 Male, age 80, both hemispheres 106.7
2532 Female, age 72, left hemisphere 93.7
2245 Female, age 91, both hemispheres 90.6
1933 Female, age 85, both hemispheres 77.3
2693 Female, age 94, both hemispheres 68.9
2250 Female, age 67, right hemisphere 67.6
2692 Male, age 74, both hemispheres 64.4
2018 Male, age 76, both hemispheres 44.1
Perirhinal gyrus
nTPM: 94.8
1847 Female, age 91, left hemisphere 138.2
1794 Male, age 80, right hemisphere 101.0
1841 Female, age 85, right hemisphere 90.5
2848 Male, age 76, right hemisphere 78.2
2521 Female, age 94, right hemisphere 66.2
Subiculum
nTPM: 66.2
2438 Female, age 94, left hemisphere 129.2
1977 Female, age 85, both hemispheres 72.2
2619 Male, age 74, both hemispheres 62.7
1901 Male, age 80, both hemispheres 62.0
2042 Male, age 76, both hemispheres 57.2
2729 Female, age 91, right hemisphere 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 56.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.6
Samples: 197

Max nTPM: 220.4
Min nTPM: 0.3
Std nTPM: 47.1
Median nTPM: 42.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 220.4
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 213.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 196.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 168.9
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 165.0
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 164.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 156.6
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 154.0
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 153.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 153.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 146.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 105.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 105.4
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 65.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 98.4
Pig sample Sample description nTPM
Subiculum
nTPM: 41.9
Samples: 4

Max nTPM: 54.0
Min nTPM: 31.6
Sample A Female 46.8
Sample B Female 31.6
Sample C Male 35.1
Sample D Male 54.0
Dorsal hippocampus
nTPM: 78.3
Samples: 4

Max nTPM: 106.6
Min nTPM: 50.7
Sample A Female 75.4
Sample B Female 80.3
Sample C Male 50.7
Sample D Male 106.6
Entorhinal cortex
nTPM: 98.5
Samples: 4

Max nTPM: 108.9
Min nTPM: 90.2
Sample A Female 100.3
Sample B Female 108.9
Sample C Male 90.2
Sample D Male 94.4
Ventral hippocampus
nTPM: 50.5
Samples: 4

Max nTPM: 64.0
Min nTPM: 36.7
Sample A Female 36.7
Sample B Female 37.8
Sample C Male 63.3
Sample D Male 64.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 108.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 108.9
Samples: 4

Max nTPM: 121.9
Min nTPM: 94.0
Sample A Male 104.6
Sample B Male 114.9
Sample C Female 94.0
Sample D Female 121.9
Hippocampal formation
nTPM: 93.5
Samples: 4

Max nTPM: 102.4
Min nTPM: 79.1
Sample A Male 79.1
Sample B Male 96.7
Sample C Female 95.7
Sample D Female 102.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.7
2093 Antisense, RP_040604_02_A09, Mouse strain C57BL/6J (56 days, male) 16.7
2094 Antisense, RP_040604_02_A09, Mouse strain C57BL/6J (56 days, male) 16.4

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