We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ERH
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ERH
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:60.1 nTPM
HPA Brain:81.2 nTPM
GTEx:60.1 nTPM
FANTOM5:187.4 Scaled Tags Per Million
Pig:117.4 nTPM
Mouse:132.0 nTPM
Allen mouse:2.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002567
Glial cells Medium
Neuronal cells High


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 75.7
2481 Female, age 94, left hemisphere 109.2
2288 Male, age 75, left hemisphere 90.2
2290 Female, age 72, unknown 76.5
2846 Female, age 79, unknown 72.8
1857 Female, age 85, left hemisphere 70.4
1854 Male, age 80, left hemisphere 65.9
1781 Male, age 74, unknown 62.3
2289 Male, age 61, right hemisphere 58.6
Globus pallidus, externus
nTPM: 61.8
2772 Female, age 79, unknown 77.9
1996 Male, age 80, right hemisphere 77.3
2395 Male, age 75, both hemispheres 73.8
2646 Male, age 61, right hemisphere 41.9
2567 Female, age 72, unknown 38.3
Globus pallidus, internus
nTPM: 73.6
2287 Male, age 75, right hemisphere 97.6
2483 Female, age 94, right hemisphere 81.6
1818 Male, age 74, unknown 77.1
2778 Female, age 91, both hemispheres 76.4
2037 Male, age 80, right hemisphere 64.1
2111 Female, age 85, right hemisphere 62.8
2566 Female, age 72, unknown 55.6
Nucleus accumbens
nTPM: 72.8
2286 Male, age 75, left hemisphere 90.6
2391 Female, age 94, left hemisphere 81.3
1856 Female, age 91, right hemisphere 79.1
2698 Female, age 72, unknown 74.3
2732 Male, age 80, right hemisphere 69.8
1806 Female, age 85, left hemisphere 67.4
1783 Male, age 74, unknown 61.3
2824 Male, age 61, right hemisphere 58.7
Nucleus basalis of Meynert
nTPM: 61.2
2484 Female, age 94, left hemisphere 70.0
2393 Male, age 80, right hemisphere 66.1
2821 Male, age 75, both hemispheres 63.6
2569 Male, age 61, both hemispheres 45.2
Nucleus of the diagonal band
nTPM: 81.2
1812 Female, age 91, both hemispheres 91.2
2195 Female, age 85, both hemispheres 85.1
2775 Male, age 80, right hemisphere 84.7
1979 Male, age 74, unknown 79.7
2029 Male, age 61, right hemisphere 65.6
Putamen
nTPM: 65.8
2482 Female, age 94, left hemisphere 92.0
1937 Female, age 91, right hemisphere 73.1
2466 Female, age 79, unknown 73.1
1838 Male, age 80, right hemisphere 64.8
1829 Male, age 74, unknown 62.3
2489 Female, age 72, unknown 47.7
2647 Male, age 75, left hemisphere 47.5
Septal nuclei
nTPM: 74.7
2031 Female, age 72, unknown 89.3
1960 Male, age 74, unknown 88.3
2629 Female, age 94, right hemisphere 81.3
2009 Female, age 91, both hemispheres 78.3
2199 Male, age 80, right hemisphere 65.8
2059 Female, age 85, both hemispheres 64.1
2394 Male, age 61, left hemisphere 55.9
Stria terminalis, bed nucleus
nTPM: 74.2
1974 Female, age 91, both hemispheres 82.3
2201 Male, age 74, unknown 71.5
2486 Female, age 94, both hemispheres 68.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 58.4
Samples: 246

Max nTPM: 121.2
Min nTPM: 31.5
Std nTPM: 12.7
Median nTPM: 56.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 121.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 117.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 111.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 105.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 103.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 99.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 95.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 90.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 85.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 84.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 82.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 81.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 80.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 78.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 78.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 76.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 76.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 75.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 74.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 73.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 73.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 72.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 71.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 70.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 70.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 70.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 70.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 70.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 69.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 68.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 68.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 68.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 67.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 67.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 67.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 67.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 66.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 66.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 66.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 66.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 66.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 65.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 65.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 64.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 64.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 64.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 64.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 63.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 63.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 63.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 63.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 63.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 62.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 62.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 62.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 62.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 62.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 62.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 61.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 61.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 61.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 61.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 61.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 60.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 60.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 60.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 60.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 60.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 59.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 59.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 59.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 59.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 59.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 59.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 59.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 59.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 59.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 58.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 58.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 58.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 58.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 58.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 58.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 57.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 57.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 57.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 57.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 57.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 56.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 56.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 56.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 56.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 56.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 56.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 56.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 56.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 56.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 56.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 56.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 56.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 56.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 56.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 55.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 55.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 55.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 55.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 55.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 55.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 55.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 55.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 55.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 54.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 54.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 54.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 54.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 54.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 54.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 54.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 54.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 54.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 54.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 53.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 53.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 53.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 53.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 53.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 52.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 52.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 52.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 52.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 52.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 52.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 52.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 52.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 52.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 52.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 52.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 52.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 52.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 52.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 51.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 51.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 51.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 51.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 51.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 51.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 51.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 51.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 51.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 50.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 50.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 50.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 50.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 50.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 50.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 49.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 49.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 49.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 49.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 49.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 49.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 48.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 48.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 48.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 48.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 48.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 47.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 47.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 47.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 47.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 47.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 47.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 47.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 47.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 47.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 47.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 47.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 46.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 46.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 46.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 46.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 46.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 46.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 46.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 46.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 45.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 45.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 45.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 44.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 44.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 44.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 44.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 44.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 44.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 44.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 43.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 43.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 43.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 42.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 36.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 34.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 31.5
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 60.1
Samples: 246

Max nTPM: 136.7
Min nTPM: 23.7
Std nTPM: 11.9
Median nTPM: 59.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 136.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 105.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 95.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 85.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 84.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 84.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 81.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 81.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 81.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 80.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 79.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 79.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 79.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 78.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 78.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 78.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 78.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 77.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 76.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 76.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 75.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 75.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 73.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 73.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 73.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 73.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 73.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 73.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 73.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 73.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 73.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 72.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 72.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 70.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 70.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 70.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 70.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 69.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 69.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 69.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 69.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 68.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 68.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 68.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 68.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 68.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 67.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 67.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 67.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 67.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 67.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 67.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 67.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 66.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 66.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 66.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 66.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 66.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 66.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 65.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 65.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 65.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 65.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 65.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 65.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 65.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 65.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 64.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 64.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 64.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 64.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 64.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 64.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 64.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 64.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 64.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 63.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 63.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 63.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 63.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 63.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 63.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 63.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 62.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 62.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 62.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 62.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 62.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 62.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 62.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 62.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 62.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 62.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 62.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 61.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 61.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 61.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 61.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 61.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 61.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 61.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 61.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 60.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 60.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 60.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 60.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 60.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 60.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 60.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 59.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 59.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 59.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 59.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 59.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 59.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 59.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 59.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 59.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 59.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 59.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 59.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 59.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 58.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 58.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 58.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 58.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 58.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 58.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 58.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 58.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 58.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 58.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 57.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 57.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 57.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 57.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 57.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 57.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 56.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 56.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 56.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 56.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 56.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 56.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 56.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 56.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 56.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 56.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 56.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 55.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 55.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 55.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 55.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 55.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 55.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 54.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 54.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 54.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 54.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 54.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 54.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 54.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 53.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 53.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 53.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 53.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 53.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 53.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 53.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 53.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 53.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 53.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 52.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 52.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 52.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 52.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 52.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 52.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 51.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 51.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 51.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 51.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 51.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 51.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 51.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 51.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 50.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 50.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 50.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 49.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 49.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 49.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 49.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 49.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 49.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 49.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 49.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 49.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 49.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 48.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 48.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 48.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 48.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 48.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 48.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 48.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 48.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 47.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 47.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 46.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 46.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 46.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 45.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 44.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 44.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 44.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 43.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 43.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 42.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 42.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 41.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 41.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 41.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 39.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 38.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 38.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 35.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 33.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 29.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 23.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 58.6
Samples: 205

Max nTPM: 109.7
Min nTPM: 38.9
Std nTPM: 9.6
Median nTPM: 57.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 109.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 86.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 85.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 81.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 80.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 80.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 79.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 77.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 77.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 76.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 75.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 75.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 75.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 74.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 74.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 74.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 73.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 73.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 71.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 70.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 70.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 70.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 68.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 68.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 68.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 68.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 67.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 67.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 67.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 67.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 66.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 66.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 66.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 66.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 65.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 65.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 65.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 65.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 65.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 65.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 64.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 64.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 64.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 64.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 64.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 64.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 64.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 64.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 63.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 63.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 63.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 63.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 63.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 63.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 62.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 62.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 62.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 62.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 62.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 62.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 62.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 62.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 61.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 61.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 61.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 61.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 61.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 60.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 60.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 60.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 60.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 60.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 60.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 60.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 60.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 60.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 59.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 59.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 59.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 59.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 59.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 58.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 58.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 58.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 58.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 58.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 58.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 58.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 58.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 57.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 57.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 57.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 57.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 57.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 57.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 57.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 57.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 56.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 56.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 56.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 56.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 56.4
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 56.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 56.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 55.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 55.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 55.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 55.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 55.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 55.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 55.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 55.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 55.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 55.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 55.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 54.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 54.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 54.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 54.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 54.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 54.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 54.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 54.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 53.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 53.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 53.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 53.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 53.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 53.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 53.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 53.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 53.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 53.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 53.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 53.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 53.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 52.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 52.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 52.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 52.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 51.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 51.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 51.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 51.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 51.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 51.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 51.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 51.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 51.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 50.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 50.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 50.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 50.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 50.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 50.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 50.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 50.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 50.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 50.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 49.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 49.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 49.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 49.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 49.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 48.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 48.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 48.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 48.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 48.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 48.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 47.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 46.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 46.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 46.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 46.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 45.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 44.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 44.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 43.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 43.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 43.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 43.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 42.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 42.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 42.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 38.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

187.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 155.3
FF:10164-103B2 76 years, female 155.3
Nucleus accumbens
Scaled Tags Per Million: 144.6
FF:10037-101F1 23-56 years, mixed 144.6
Putamen
Scaled Tags Per Million: 171.4
FF:10176-103C5 60 years, female 171.4
Globus pallidus
Scaled Tags Per Million: 187.4
FF:10175-103C4 60 years, female 251.1
FF:10161-103A8 76 years, female 123.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.4
Pig sample Sample description nTPM
Caudate
nTPM: 92.0
Samples: 4

Max nTPM: 99.2
Min nTPM: 79.8
Sample A Female 92.8
Sample B Female 96.0
Sample C Male 99.2
Sample D Male 79.8
Putamen
nTPM: 117.4
Samples: 4

Max nTPM: 144.5
Min nTPM: 90.1
Sample A Female 124.5
Sample B Female 90.1
Sample C Male 144.5
Sample D Male 110.3
Septum
nTPM: 109.9
Samples: 4

Max nTPM: 114.6
Min nTPM: 105.0
Sample A Female 114.6
Sample B Female 105.0
Sample C Male 113.7
Sample D Male 106.4
Ventral pallidum
nTPM: 100.0
Samples: 4

Max nTPM: 118.6
Min nTPM: 87.3
Sample A Female 87.3
Sample B Female 118.6
Sample C Male 98.8
Sample D Male 95.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

132.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 112.1
Samples: 4

Max nTPM: 118.7
Min nTPM: 105.7
Sample A Male 118.7
Sample B Male 113.9
Sample C Female 110.2
Sample D Female 105.7
Septum
nTPM: 132.1
Samples: 4

Max nTPM: 138.9
Min nTPM: 124.7
Sample A Male 124.7
Sample B Male 138.9
Sample C Female 132.3
Sample D Female 132.3
Ventral forebrain
nTPM: 107.2
Samples: 4

Max nTPM: 110.9
Min nTPM: 104.2
Sample A Male 105.3
Sample B Male 104.2
Sample C Female 110.9
Sample D Female 108.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.0
79544842 Antisense, RP_071101_01_A05, Mouse strain C57BL/6J (56 days, male) 2.0
Pallidum
Expression energy: 1.8
79544842 Antisense, RP_071101_01_A05, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org