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ZFYVE21
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  • ZFYVE21
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:79.3 nTPM
HPA Brain:46.5 nTPM
GTEx:79.3 nTPM
FANTOM5:79.0 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:23.0 nTPM
Allen mouse:0.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055721
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

46.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 32.9
2481 Female, age 94, left hemisphere 51.5
1857 Female, age 85, left hemisphere 38.1
2290 Female, age 72, unknown 33.9
2288 Male, age 75, left hemisphere 32.6
1854 Male, age 80, left hemisphere 29.8
2846 Female, age 79, unknown 27.9
2289 Male, age 61, right hemisphere 25.8
1781 Male, age 74, unknown 24.1
Globus pallidus, externus
nTPM: 46.5
2646 Male, age 61, right hemisphere 65.1
1996 Male, age 80, right hemisphere 64.8
2772 Female, age 79, unknown 51.8
2395 Male, age 75, both hemispheres 31.0
2567 Female, age 72, unknown 19.6
Globus pallidus, internus
nTPM: 42.4
2483 Female, age 94, right hemisphere 63.9
2287 Male, age 75, right hemisphere 53.8
2037 Male, age 80, right hemisphere 48.5
1818 Male, age 74, unknown 45.6
2778 Female, age 91, both hemispheres 36.3
2111 Female, age 85, right hemisphere 28.0
2566 Female, age 72, unknown 20.9
Nucleus accumbens
nTPM: 32.7
2286 Male, age 75, left hemisphere 51.4
1806 Female, age 85, left hemisphere 34.3
2698 Female, age 72, unknown 31.7
2824 Male, age 61, right hemisphere 31.4
2391 Female, age 94, left hemisphere 31.2
1856 Female, age 91, right hemisphere 30.3
1783 Male, age 74, unknown 27.6
2732 Male, age 80, right hemisphere 23.5
Nucleus basalis of Meynert
nTPM: 35.1
2569 Male, age 61, both hemispheres 67.7
2484 Female, age 94, left hemisphere 26.7
2393 Male, age 80, right hemisphere 23.2
2821 Male, age 75, both hemispheres 22.9
Nucleus of the diagonal band
nTPM: 29.9
1812 Female, age 91, both hemispheres 34.9
2775 Male, age 80, right hemisphere 33.9
2195 Female, age 85, both hemispheres 28.4
1979 Male, age 74, unknown 26.5
2029 Male, age 61, right hemisphere 25.6
Putamen
nTPM: 24.8
2482 Female, age 94, left hemisphere 36.3
2647 Male, age 75, left hemisphere 25.7
1829 Male, age 74, unknown 25.0
1937 Female, age 91, right hemisphere 24.9
2466 Female, age 79, unknown 23.8
1838 Male, age 80, right hemisphere 20.9
2489 Female, age 72, unknown 16.9
Septal nuclei
nTPM: 29.5
2059 Female, age 85, both hemispheres 40.9
2031 Female, age 72, unknown 36.8
1960 Male, age 74, unknown 28.8
2199 Male, age 80, right hemisphere 28.0
2009 Female, age 91, both hemispheres 27.7
2394 Male, age 61, left hemisphere 24.3
2629 Female, age 94, right hemisphere 20.0
Stria terminalis, bed nucleus
nTPM: 23.5
1974 Female, age 91, both hemispheres 26.8
2201 Male, age 74, unknown 25.3
2486 Female, age 94, both hemispheres 18.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 69.7
Samples: 246

Max nTPM: 143.6
Min nTPM: 33.9
Std nTPM: 21.0
Median nTPM: 66.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 143.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 138.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 134.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 133.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 132.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 129.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 127.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 116.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 115.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 114.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 114.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 114.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 114.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 112.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 112.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 108.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 105.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 103.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 103.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 102.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 101.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 101.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 100.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 100.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 99.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 98.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 98.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 97.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 96.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 95.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 95.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 94.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 94.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 93.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 91.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 90.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 89.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 88.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 88.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 87.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 85.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 85.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 85.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 84.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 84.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 83.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 82.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 82.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 82.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 81.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 80.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 79.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 79.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 79.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 79.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 79.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 78.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 78.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 78.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 78.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 76.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 76.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 76.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 76.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 75.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 75.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 75.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 75.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 75.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 75.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 74.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 74.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 73.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 73.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 73.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 73.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 72.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 72.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 72.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 72.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 72.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 72.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 72.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 72.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 72.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 72.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 71.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 71.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 71.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 71.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 71.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 70.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 70.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 70.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 70.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 70.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 69.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 69.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 69.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 69.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 68.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 68.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 68.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 68.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 67.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 67.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 67.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 67.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 67.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 67.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 67.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 66.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 66.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 66.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 65.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 65.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 65.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 64.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 64.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 64.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 64.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 64.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 64.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 64.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 63.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 63.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 62.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 62.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 62.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 62.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 62.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 62.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 61.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 61.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 60.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 60.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 60.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 60.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 60.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 60.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 60.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 58.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 58.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 58.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 57.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 57.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 57.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 57.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 56.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 56.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 55.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 55.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 55.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 55.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 55.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 55.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 54.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 54.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 54.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 54.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 54.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 53.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 53.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 53.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 53.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 53.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 52.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 52.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 51.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 51.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 51.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 51.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 51.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 51.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 51.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 50.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 50.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 49.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 49.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 49.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 48.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 48.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 48.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 47.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 47.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 47.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 47.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 47.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 46.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 46.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 46.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 46.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 46.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 46.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 45.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 45.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 45.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 45.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 45.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 44.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 44.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 43.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 42.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 42.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 41.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 40.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 40.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 36.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 34.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 33.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 79.3
Samples: 246

Max nTPM: 220.1
Min nTPM: 28.7
Std nTPM: 30.9
Median nTPM: 71.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 220.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 209.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 192.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 176.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 170.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 167.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 167.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 162.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 153.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 147.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 143.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 143.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 141.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 135.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 134.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 133.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 133.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 132.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 130.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 128.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 126.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 124.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 120.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 117.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 117.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 116.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 113.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 113.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 112.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 112.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 111.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 110.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 109.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 109.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 109.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 108.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 107.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 107.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 107.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 106.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 106.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 105.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 104.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 104.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 103.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 102.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 102.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 102.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 101.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 101.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 101.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 100.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 100.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 99.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 98.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 95.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 95.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 95.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 95.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 93.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 92.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 92.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 91.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 91.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 90.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 89.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 89.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 89.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 89.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 89.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 88.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 87.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 86.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 86.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 85.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 85.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 84.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 82.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 82.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 82.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 82.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 82.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 81.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 81.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 81.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 80.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 79.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 79.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 78.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 78.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 78.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 78.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 77.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 77.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 77.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 77.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 77.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 76.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 76.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 76.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 75.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 75.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 75.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 75.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 74.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 74.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 74.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 74.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 74.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 74.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 73.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 73.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 73.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 73.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 72.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 72.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 72.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 72.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 72.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 71.5
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 71.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 71.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 71.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 70.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 70.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 70.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 70.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 70.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 70.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 70.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 70.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 70.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 69.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 68.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 68.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 68.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 68.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 67.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 67.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 67.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 67.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 67.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 67.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 66.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 66.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 65.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 65.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 65.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 65.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 65.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 64.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 64.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 63.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 63.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 63.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 63.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 63.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 62.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 62.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 62.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 62.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 61.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 61.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 61.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 61.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 61.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 61.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 60.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 59.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 59.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 59.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 59.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 59.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 58.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 58.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 58.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 58.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 58.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 58.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 57.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 57.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 57.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 57.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 56.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 56.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 56.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 56.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 56.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 55.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 55.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 55.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 54.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 54.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 54.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 53.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 53.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 53.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 53.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 52.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 52.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 52.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 52.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 52.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 51.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 51.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 51.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 50.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 49.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 49.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 49.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 49.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 49.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 48.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 47.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 47.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 46.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 46.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 46.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 46.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 45.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 44.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 44.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 43.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 42.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 42.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 42.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 41.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 41.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 41.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 40.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 39.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 39.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 34.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 28.7
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Brain - Putamen (basal ganglia)
Average nTPM: 71.4
Samples: 205

Max nTPM: 138.7
Min nTPM: 35.5
Std nTPM: 18.9
Median nTPM: 67.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 138.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 129.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 128.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 123.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 121.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 120.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 116.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 110.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 108.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 106.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 104.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 103.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 102.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 101.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 101.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 99.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 98.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 98.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 98.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 96.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 95.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 95.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 94.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 93.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 92.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 92.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 92.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 92.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 92.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 91.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 91.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 91.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 90.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 89.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 89.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 89.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 88.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 88.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 88.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 88.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 86.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 86.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 86.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 86.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 84.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 84.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 83.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 83.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 82.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 82.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 80.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 80.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 80.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 80.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 79.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 79.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 79.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 78.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 78.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 78.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 78.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 77.8
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 77.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 77.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 77.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 77.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 77.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 77.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 77.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 76.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 76.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 76.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 75.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 75.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 74.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 74.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 73.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 73.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 72.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 72.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 72.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 72.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 72.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 72.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 71.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 71.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 70.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 70.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 70.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 70.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 69.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 69.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 69.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 69.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 69.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 68.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 68.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 68.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 67.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 67.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 67.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 67.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 67.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 67.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 67.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 66.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 66.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 66.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 65.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 65.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 65.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 65.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 65.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 65.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 65.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 65.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 65.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 65.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 65.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 64.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 63.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 63.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 63.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 63.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 62.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 62.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 62.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 62.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 61.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 61.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 61.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 61.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 61.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 61.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 60.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 59.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 59.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 59.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 59.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 58.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 58.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 58.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 57.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 57.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 57.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 57.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 56.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 56.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 56.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 55.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 55.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 55.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 55.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 54.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 54.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 54.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 54.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 54.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 53.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 53.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 53.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 52.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 52.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 52.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 52.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 52.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 51.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 51.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 51.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 51.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 50.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 50.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 50.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 49.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 47.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 47.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 47.2
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 47.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 45.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 44.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 43.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 43.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 43.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 42.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 42.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 40.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 39.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 38.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 35.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 35.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

79.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 74.0
FF:10164-103B2 76 years, female 74.0
Nucleus accumbens
Scaled Tags Per Million: 74.2
FF:10037-101F1 23-56 years, mixed 74.2
Putamen
Scaled Tags Per Million: 79.0
FF:10176-103C5 60 years, female 79.0
Globus pallidus
Scaled Tags Per Million: 67.7
FF:10175-103C4 60 years, female 70.6
FF:10161-103A8 76 years, female 64.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.4
Pig sample Sample description nTPM
Caudate
nTPM: 15.8
Samples: 4

Max nTPM: 18.6
Min nTPM: 13.3
Sample A Female 14.7
Sample B Female 18.6
Sample C Male 16.4
Sample D Male 13.3
Putamen
nTPM: 22.3
Samples: 4

Max nTPM: 33.3
Min nTPM: 15.8
Sample A Female 33.3
Sample B Female 15.8
Sample C Male 20.5
Sample D Male 19.5
Septum
nTPM: 24.4
Samples: 4

Max nTPM: 26.0
Min nTPM: 22.1
Sample A Female 25.8
Sample B Female 22.1
Sample C Male 26.0
Sample D Male 23.7
Ventral pallidum
nTPM: 20.9
Samples: 4

Max nTPM: 23.5
Min nTPM: 15.7
Sample A Female 15.7
Sample B Female 23.3
Sample C Male 23.5
Sample D Male 21.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 20.5
Samples: 4

Max nTPM: 23.9
Min nTPM: 18.2
Sample A Male 18.2
Sample B Male 23.9
Sample C Female 18.3
Sample D Female 21.4
Septum
nTPM: 23.0
Samples: 4

Max nTPM: 25.7
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 24.2
Sample C Female 25.7
Sample D Female 21.6
Ventral forebrain
nTPM: 22.0
Samples: 4

Max nTPM: 25.0
Min nTPM: 18.4
Sample A Male 25.0
Sample B Male 20.4
Sample C Female 24.2
Sample D Female 18.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
76097729 Antisense, RP_060626_01_E01, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 0.5
76097729 Antisense, RP_060626_01_E01, Mouse strain C57BL/6J (56 days, male) 0.5

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