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MTHFD1
HPA
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  • MTHFD1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MTHFD1
Synonyms MTHFC, MTHFD
Gene descriptioni

Full gene name according to HGNC.

Methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Human disease related genes
Metabolic proteins
Plasma proteins
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q23.3
Chromosome location (bp) 64388031 - 64463457
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

10
Ensembl ENSG00000100714 (version 109)
Entrez gene 4522
HGNC HGNC:7432
UniProt P11586 (UniProt - Evidence at protein level)
neXtProt NX_P11586
GeneCards MTHFD1
Antibodypedia MTHFD1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Trifunctional enzyme that catalyzes the interconversion of three forms of one-carbon-substituted tetrahydrofolate: (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate, 5,10-methenyltetrahydrofolate and (6S)-10-formyltetrahydrofolate 1, 2, 3. These derivatives of tetrahydrofolate are differentially required in nucleotide and amino acid biosynthesis, (6S)-10-formyltetrahydrofolate being required for purine biosynthesis while (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate is used for serine and methionine biosynthesis for instance 4, 5.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Hydrolase, Ligase, Multifunctional enzyme, Oxidoreductase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

One-carbon metabolism
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

ATP-binding, NADP, Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein that possesses three distinct enzymatic activities, 5,10-methylenetetrahydrofolate dehydrogenase, 5,10-methenyltetrahydrofolate cyclohydrolase and 10-formyltetrahydrofolate synthetase. Each of these activities catalyzes one of three sequential reactions in the interconversion of 1-carbon derivatives of tetrahydrofolate, which are substrates for methionine, thymidylate, and de novo purine syntheses. The trifunctional enzymatic activities are conferred by two major domains, an aminoterminal portion containing the dehydrogenase and cyclohydrolase activities and a larger synthetase domain. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MTHFD1-201
ENSP00000438588
ENST00000545908
F5H2F4
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic
Show all
Metabolic proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004477 [methenyltetrahydrofolate cyclohydrolase activity]
GO:0004486 [methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006730 [one-carbon metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0016787 [hydrolase activity]
GO:0016874 [ligase activity]
GO:0035999 [tetrahydrofolate interconversion]
Show all
964 aa
104.7 kDa
No 0
MTHFD1-207
ENSP00000477359
ENST00000554739
V9GZ32
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
23 aa
2.6 kDa
No 0
MTHFD1-208
ENSP00000477501
ENST00000554768
V9GZ78
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004477 [methenyltetrahydrofolate cyclohydrolase activity]
GO:0004486 [methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006730 [one-carbon metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0016787 [hydrolase activity]
GO:0016874 [ligase activity]
GO:0035999 [tetrahydrofolate interconversion]
Show all
854 aa
92.6 kDa
No 0
MTHFD1-214
ENSP00000477199
ENST00000557370
V9GYY3
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic
Show all
Metabolic proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004477 [methenyltetrahydrofolate cyclohydrolase activity]
GO:0004486 [methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
GO:0005829 [cytosol]
GO:0006730 [one-carbon metabolic process]
GO:0016491 [oxidoreductase activity]
GO:0016787 [hydrolase activity]
GO:0016874 [ligase activity]
GO:0035999 [tetrahydrofolate interconversion]
Show all
922 aa
99.7 kDa
No 0
MTHFD1-215
ENSP00000476468
ENST00000557539
V9GY75
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic
Show all
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
Show all
854 aa
92.6 kDa
No 0
MTHFD1-220
ENSP00000498336
ENST00000652337
P11586
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic Methylenetetrahydrofolate dehydrogenase Methenyltetrahydrofolate cyclohydrolase Formyltetrahydrofolate synthetase C-1-tetrahydrofolate synthase, cytoplasmic, N-terminally processed
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
   Hydrolases
   Ligase
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000105 [histidine biosynthetic process]
GO:0000166 [nucleotide binding]
GO:0001780 [neutrophil homeostasis]
GO:0001843 [neural tube closure]
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004477 [methenyltetrahydrofolate cyclohydrolase activity]
GO:0004486 [methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity]
GO:0004487 [methylenetetrahydrofolate dehydrogenase (NAD+) activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005515 [protein binding]
GO:0005524 [ATP binding]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0006164 [purine nucleotide biosynthetic process]
GO:0006555 [methionine metabolic process]
GO:0006730 [one-carbon metabolic process]
GO:0007507 [heart development]
GO:0008152 [metabolic process]
GO:0008652 [cellular amino acid biosynthetic process]
GO:0009069 [serine family amino acid metabolic process]
GO:0009070 [serine family amino acid biosynthetic process]
GO:0009086 [methionine biosynthetic process]
GO:0009152 [purine ribonucleotide biosynthetic process]
GO:0009257 [10-formyltetrahydrofolate biosynthetic process]
GO:0016020 [membrane]
GO:0016491 [oxidoreductase activity]
GO:0016787 [hydrolase activity]
GO:0016874 [ligase activity]
GO:0019346 [transsulfuration]
GO:0035999 [tetrahydrofolate interconversion]
GO:0048702 [embryonic neurocranium morphogenesis]
GO:0048703 [embryonic viscerocranium morphogenesis]
GO:0061053 [somite development]
GO:0070062 [extracellular exosome]
Show all
935 aa
101.5 kDa
No 0
MTHFD1-222
ENSP00000499176
ENST00000652509
A0A494C1T2
[Direct mapping] C-1-tetrahydrofolate synthase, cytoplasmic
Show all
Metabolic proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
GO:0006730 [one-carbon metabolic process]
GO:0016874 [ligase activity]
GO:0035999 [tetrahydrofolate interconversion]
Show all
644 aa
69.7 kDa
No 0
MTHFD1-225
ENSP00000513156
ENST00000697168
Metabolic proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
Show all
884 aa
96.2 kDa
No 0
MTHFD1-230
ENSP00000513159
ENST00000697173
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
Show all
854 aa
92.6 kDa
No 0
MTHFD1-231
ENSP00000513160
ENST00000697174
Metabolic proteins
   MEMSAT3 predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Congenital malformations
   Congenital malformations of the nervous system
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003824 [catalytic activity]
GO:0004329 [formate-tetrahydrofolate ligase activity]
GO:0004488 [methylenetetrahydrofolate dehydrogenase (NADP+) activity]
GO:0005524 [ATP binding]
Show all
852 aa
92.7 kDa
No 0

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