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PPP4R3A
HPA
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  • PPP4R3A
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PPP4R3A
Synonyms FLFL1, FLJ20707, KIAA2010, MSTP033, PP4R3, SMEK1, smk-1, smk1
Gene descriptioni

Full gene name according to HGNC.

Protein phosphatase 4 regulatory subunit 3A
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q32.12
Chromosome location (bp) 91457508 - 91510554
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

7
Ensembl ENSG00000100796 (version 109)
Entrez gene 55671
HGNC HGNC:20219
UniProt Q6IN85 (UniProt - Evidence at protein level)
neXtProt NX_Q6IN85
GeneCards PPP4R3A
Antibodypedia PPP4R3A antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Regulatory subunit of serine/threonine-protein phosphatase 4. May regulate the activity of PPP4C at centrosomal microtubule organizing centers. The PPP4C-PPP4R2-PPP4R3A PP4 complex specifically dephosphorylates H2AX phosphorylated on 'Ser-140' (gamma-H2AX) generated during DNA replication and required for DNA DSB repair.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to act upstream of or within positive regulation of gluconeogenesis and protein dephosphorylation. Located in cytosol and nuclear speck. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PPP4R3A-203
ENSP00000451939
ENST00000554511
G3V4R3
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
99 aa
11.4 kDa
No 0
PPP4R3A-205
ENSP00000450864
ENST00000554684
Q6IN85
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
A0A024R6M2
[Target identity:100%; Query identity:100%] KIAA2010, isoform CRA_a
Show all
   Phobius predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006470 [protein dephosphorylation]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0030289 [protein phosphatase 4 complex]
GO:0072542 [protein phosphatase activator activity]
Show all
820 aa
93.9 kDa
No 0
PPP4R3A-206
ENSP00000450883
ENST00000554943
Q6IN85
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
   Phobius predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006470 [protein dephosphorylation]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0030289 [protein phosphatase 4 complex]
GO:0072542 [protein phosphatase activator activity]
Show all
833 aa
95.4 kDa
No 0
PPP4R3A-207
ENSP00000452257
ENST00000555029
G3V5A2
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
190 aa
21.9 kDa
No 0
PPP4R3A-208
ENSP00000450891
ENST00000555462
Q6IN85
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
   Phobius predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005815 [microtubule organizing center]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0006470 [protein dephosphorylation]
GO:0006974 [cellular response to DNA damage stimulus]
GO:0016607 [nuclear speck]
GO:0030289 [protein phosphatase 4 complex]
GO:0072542 [protein phosphatase activator activity]
Show all
594 aa
67.8 kDa
No 0
PPP4R3A-209
ENSP00000451841
ENST00000555470
H0YJN6
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
199 aa
23.1 kDa
No 0
PPP4R3A-211
ENSP00000450432
ENST00000557018
G3V231
[Direct mapping] Serine/threonine-protein phosphatase 4 regulatory subunit 3A
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
150 aa
17 kDa
No 0

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