HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:95.5 nTPM
HPA Brain:91.1 nTPM
GTEx:95.5 nTPM
FANTOM5:127.9 Scaled Tags Per Million
Pig:112.9 nTPM
Mouse:255.7 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049518
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 91.1
Sample id Sample description nTPM
Hippocampus
nTPM: 77.2
1898 Male, age 80, left hemisphere 99.6
2529 Female, age 94, left hemisphere 80.0
1855 Male, age 76, left hemisphere 77.7
2148 Female, age 91, left hemisphere 73.4
1911 Female, age 85, right hemisphere 66.2
2621 Female, age 67, right hemisphere 66.1
Dentate gyrus
nTPM: 79.4
2010 Male, age 76, both hemispheres 96.3
1927 Female, age 91, both hemispheres 91.1
2530 Female, age 94, left hemisphere 86.0
2528 Male, age 74, both hemispheres 75.1
2246 Female, age 85, both hemispheres 67.6
2531 Female, age 67, both hemispheres 60.3
Entorhinal gyrus
nTPM: 70.5
2764 Male, age 80, right hemisphere 83.1
1938 Female, age 85, left hemisphere 78.8
2117 Female, age 91, right hemisphere 74.6
1787 Male, age 76, left hemisphere 70.1
2686 Male, age 75, right hemisphere 59.3
2613 Female, age 94, left hemisphere 57.3
Hippocampus, CA1
nTPM: 91.1
2749 Male, age 80, left hemisphere 139.8
1873 Female, age 85, both hemispheres 85.4
2045 Male, age 76, both hemispheres 83.1
2527 Male, age 74, both hemispheres 78.0
2082 Female, age 91, right hemisphere 69.1
Hippocampus, CA2
nTPM: 84.5
1963 Male, age 80, left hemisphere 114.5
1892 Male, age 76, both hemispheres 103.8
2249 Male, age 74, both hemispheres 82.8
1940 Female, age 85, left hemisphere 73.7
2113 Female, age 91, right hemisphere 66.2
2437 Female, age 94, left hemisphere 66.1
Hippocampus, CA3
nTPM: 79.9
2137 Male, age 80, left hemisphere 100.3
2436 Male, age 74, both hemispheres 88.1
1867 Male, age 76, both hemispheres 86.6
1891 Female, age 85, both hemispheres 76.0
2620 Female, age 94, left hemisphere 67.7
2861 Female, age 67, both hemispheres 60.6
Parahippocampal cortex
nTPM: 66.0
1850 Male, age 80, both hemispheres 87.2
1990 Female, age 91, right hemisphere 79.8
1933 Female, age 85, both hemispheres 74.8
2018 Male, age 76, both hemispheres 73.1
2250 Female, age 67, right hemisphere 66.0
2245 Female, age 91, both hemispheres 63.7
2532 Female, age 72, left hemisphere 57.8
2692 Male, age 74, both hemispheres 57.6
2693 Female, age 94, both hemispheres 52.5
2622 Female, age 67, right hemisphere 47.2
Perirhinal gyrus
nTPM: 77.0
1847 Female, age 91, left hemisphere 104.3
1794 Male, age 80, right hemisphere 80.6
1841 Female, age 85, right hemisphere 77.2
2521 Female, age 94, right hemisphere 62.9
2848 Male, age 76, right hemisphere 59.8
Subiculum
nTPM: 70.4
1901 Male, age 80, both hemispheres 85.3
1977 Female, age 85, both hemispheres 74.0
2042 Male, age 76, both hemispheres 73.0
2729 Female, age 91, right hemisphere 71.5
2438 Female, age 94, left hemisphere 59.5
2619 Male, age 74, both hemispheres 59.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 95.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.5
Samples: 197

Max nTPM: 185.3
Min nTPM: 53.8
Std nTPM: 20.8
Median nTPM: 90.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 185.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 153.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 149.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 149.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 144.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 143.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 142.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 138.7
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 133.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 133.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 133.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 127.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 127.9
FF:10169-103B7 60 years, female 159.9
FF:10153-102I9 76 years, female 95.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 112.9
Pig sample Sample description nTPM
Subiculum
nTPM: 83.0
Samples: 4

Max nTPM: 111.0
Min nTPM: 68.2
Sample A Female 111.0
Sample B Female 81.3
Sample C Male 71.6
Sample D Male 68.2
Dorsal hippocampus
nTPM: 112.9
Samples: 4

Max nTPM: 164.9
Min nTPM: 76.7
Sample A Female 164.9
Sample B Female 116.4
Sample C Male 93.5
Sample D Male 76.7
Entorhinal cortex
nTPM: 84.6
Samples: 4

Max nTPM: 109.1
Min nTPM: 64.2
Sample A Female 83.4
Sample B Female 109.1
Sample C Male 81.8
Sample D Male 64.2
Ventral hippocampus
nTPM: 106.6
Samples: 4

Max nTPM: 136.0
Min nTPM: 69.3
Sample A Female 129.7
Sample B Female 69.3
Sample C Male 136.0
Sample D Male 91.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 255.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 192.6
Samples: 4

Max nTPM: 203.0
Min nTPM: 181.3
Sample A Male 184.5
Sample B Male 203.0
Sample C Female 201.7
Sample D Female 181.3
Hippocampal formation
nTPM: 255.7
Samples: 4

Max nTPM: 280.3
Min nTPM: 225.0
Sample A Male 260.0
Sample B Male 225.0
Sample C Female 280.3
Sample D Female 257.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
576433 Antisense, RP_040826_01_H09, Mouse strain C57BL/6J (56 days, male) 21.8
81599656 Antisense, RP_071213_04_B01, Mouse strain C57BL/6J (56 days, male) 17.1

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