We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PSMA6
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PSMA6
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:80.6 nTPM
HPA Brain:56.3 nTPM
GTEx:80.6 nTPM
FANTOM5:104.8 Scaled Tags Per Million
Pig:74.9 nTPM
Mouse:232.5 nTPM
Allen mouse:6.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003049
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 47.8
2481 Female, age 94, left hemisphere 58.7
2846 Female, age 79, unknown 58.1
1857 Female, age 85, left hemisphere 47.6
2290 Female, age 72, unknown 47.5
1781 Male, age 74, unknown 46.8
2288 Male, age 75, left hemisphere 46.7
1854 Male, age 80, left hemisphere 46.6
2289 Male, age 61, right hemisphere 30.2
Globus pallidus, externus
nTPM: 38.7
2395 Male, age 75, both hemispheres 53.2
2772 Female, age 79, unknown 47.5
1996 Male, age 80, right hemisphere 45.1
2646 Male, age 61, right hemisphere 28.6
2567 Female, age 72, unknown 19.3
Globus pallidus, internus
nTPM: 40.7
2483 Female, age 94, right hemisphere 54.0
2287 Male, age 75, right hemisphere 49.6
1818 Male, age 74, unknown 43.4
2778 Female, age 91, both hemispheres 43.3
2037 Male, age 80, right hemisphere 39.9
2111 Female, age 85, right hemisphere 30.7
2566 Female, age 72, unknown 23.9
Nucleus accumbens
nTPM: 46.9
1856 Female, age 91, right hemisphere 55.6
2286 Male, age 75, left hemisphere 54.7
2391 Female, age 94, left hemisphere 52.6
2698 Female, age 72, unknown 52.6
1806 Female, age 85, left hemisphere 46.1
1783 Male, age 74, unknown 44.3
2824 Male, age 61, right hemisphere 36.7
2732 Male, age 80, right hemisphere 33.0
Nucleus basalis of Meynert
nTPM: 41.1
2393 Male, age 80, right hemisphere 45.9
2821 Male, age 75, both hemispheres 43.9
2484 Female, age 94, left hemisphere 43.0
2569 Male, age 61, both hemispheres 31.5
Nucleus of the diagonal band
nTPM: 56.3
1812 Female, age 91, both hemispheres 68.7
2195 Female, age 85, both hemispheres 57.7
2775 Male, age 80, right hemisphere 56.0
2029 Male, age 61, right hemisphere 55.3
1979 Male, age 74, unknown 43.6
Putamen
nTPM: 45.2
2466 Female, age 79, unknown 57.0
2482 Female, age 94, left hemisphere 56.1
1937 Female, age 91, right hemisphere 52.8
1838 Male, age 80, right hemisphere 47.8
1829 Male, age 74, unknown 38.2
2489 Female, age 72, unknown 33.9
2647 Male, age 75, left hemisphere 30.7
Septal nuclei
nTPM: 51.2
2031 Female, age 72, unknown 72.4
1960 Male, age 74, unknown 65.8
2009 Female, age 91, both hemispheres 56.2
2629 Female, age 94, right hemisphere 49.0
2059 Female, age 85, both hemispheres 42.2
2199 Male, age 80, right hemisphere 37.7
2394 Male, age 61, left hemisphere 34.9
Stria terminalis, bed nucleus
nTPM: 43.8
1974 Female, age 91, both hemispheres 52.2
2486 Female, age 94, both hemispheres 41.4
2201 Male, age 74, unknown 37.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

80.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 75.4
Samples: 246

Max nTPM: 146.7
Min nTPM: 48.5
Std nTPM: 16.8
Median nTPM: 71.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 146.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 132.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 130.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 127.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 120.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 117.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 115.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 115.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 114.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 112.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 109.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 108.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 108.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 108.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 108.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 107.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 107.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 103.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 102.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 100.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 100.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 100.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 99.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 99.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 98.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 96.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 96.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 94.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 91.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 91.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 91.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 91.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 90.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 90.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 90.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 90.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 90.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 90.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 90.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 90.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 89.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 89.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 88.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 87.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 86.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 86.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 86.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 85.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 85.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 85.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 85.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 84.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 84.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 84.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 83.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 83.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 83.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 83.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 82.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 82.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 82.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 82.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 81.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 81.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 81.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 80.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 80.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 80.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 80.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 80.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 79.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 79.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 79.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 79.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 79.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 78.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 78.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 78.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 78.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 77.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 77.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 77.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 77.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 77.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 77.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 77.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 76.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 76.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 75.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 75.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 75.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 75.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 75.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 75.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 75.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 75.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 75.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 75.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 74.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 74.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 74.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 74.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 74.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 73.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 73.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 72.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 72.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 72.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 72.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 72.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 72.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 72.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 72.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 72.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 71.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 71.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 71.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 71.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 71.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 71.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 71.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 71.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 70.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 70.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 70.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 70.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 70.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 70.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 70.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 69.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 69.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 69.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 69.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 69.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 69.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 69.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 69.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 69.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 68.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 68.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 68.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 68.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 68.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 67.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 67.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 67.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 67.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 67.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 66.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 66.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 66.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 66.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 66.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 66.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 66.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 65.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 65.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 65.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 64.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 64.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 64.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 64.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 64.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 64.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 64.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 64.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 64.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 64.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 63.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 63.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 63.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 63.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 63.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 62.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 62.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 62.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 62.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 62.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 62.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 61.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 61.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 61.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 60.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 60.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 59.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 59.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 59.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 59.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 59.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 59.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 59.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 59.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 59.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 58.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 58.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 58.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 57.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 57.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 57.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 56.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 56.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 56.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 56.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 56.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 55.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 54.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 53.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 53.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 52.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 50.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 50.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 49.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 48.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 48.5
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 80.3
Samples: 246

Max nTPM: 217.7
Min nTPM: 52.6
Std nTPM: 18.8
Median nTPM: 77.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 217.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 177.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 154.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 141.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 139.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 139.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 136.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 136.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 126.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 120.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 111.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 109.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 108.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 105.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 105.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 105.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 103.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 101.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 99.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 98.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 98.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 98.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 97.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 96.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 96.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 95.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 95.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 93.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 93.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 92.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 92.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 92.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 91.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 91.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 91.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 91.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 91.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 91.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 91.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 90.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 90.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 90.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 90.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 89.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 89.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 89.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 89.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 89.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 88.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 88.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 88.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 88.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 88.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 88.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 87.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 87.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 87.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 87.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 86.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 86.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 86.6
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 86.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 86.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 86.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 86.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 85.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 85.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 85.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 85.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 85.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 85.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 84.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 84.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 84.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 83.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 83.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 83.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 83.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 83.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 83.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 83.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 82.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 82.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 82.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 82.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 82.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 81.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 81.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 81.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 80.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 80.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 80.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 80.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 80.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 80.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 80.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 80.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 79.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 79.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 79.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 79.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 79.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 79.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 79.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 79.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 78.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 78.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 78.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 78.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 78.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 78.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 78.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 78.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 78.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 78.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 78.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 77.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 77.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 77.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 77.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 77.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 77.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 77.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 77.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 77.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 77.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 76.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 76.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 76.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 76.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 76.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 76.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 76.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 76.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 76.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 75.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 75.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 75.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 75.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 75.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 75.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 75.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 74.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 74.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 74.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 74.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 74.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 74.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 74.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 73.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 73.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 73.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 73.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 73.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 72.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 72.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 72.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 72.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 71.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 71.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 71.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 71.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 71.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 71.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 71.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 71.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 71.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 70.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 70.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 70.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 70.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 70.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 70.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 70.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 70.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 70.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 70.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 70.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 70.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 70.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 70.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 69.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 69.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 69.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 69.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 69.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 69.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 69.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 69.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 68.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 68.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 68.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 68.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 68.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 68.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 67.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 67.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 67.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 67.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 67.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 66.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 66.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 66.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 66.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 66.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 66.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 66.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 66.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 65.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 65.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 65.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 65.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 64.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 64.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 64.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 64.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 64.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 64.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 63.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 63.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 63.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 63.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 63.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 63.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 63.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 63.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 62.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 62.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 61.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 61.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 61.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 60.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 60.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 59.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 58.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 58.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 58.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 57.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 55.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 55.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 54.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 54.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 54.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 52.6
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 80.6
Samples: 205

Max nTPM: 132.4
Min nTPM: 55.5
Std nTPM: 16.0
Median nTPM: 78.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 132.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 129.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 125.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 124.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 124.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 121.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 119.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 117.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 116.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 114.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 112.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 111.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 111.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 109.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 108.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 108.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 107.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 105.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 105.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 105.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 104.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 102.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 101.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 101.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 101.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 100.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 99.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 98.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 97.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 96.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 96.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 96.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 96.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 96.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 96.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 95.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 93.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 93.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 92.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 92.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 92.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 91.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 91.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 91.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 91.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 91.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 89.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 89.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 89.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 88.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 88.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 88.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 87.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 87.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 87.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 86.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 86.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 86.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 86.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 86.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 86.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 86.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 85.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 85.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 85.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 85.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 85.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 84.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 83.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 83.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 83.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 83.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 83.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 83.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 82.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 81.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 81.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 80.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 80.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 80.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 80.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 80.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 80.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 80.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 79.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 79.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 79.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 79.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 79.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 79.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 79.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 79.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 79.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 78.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 78.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 78.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 78.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 78.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 78.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 78.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 77.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 77.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 77.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 76.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 76.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 76.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 76.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 76.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 76.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 75.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 75.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 75.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 75.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 74.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 73.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 73.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 73.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 73.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 73.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 73.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 72.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 72.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 72.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 72.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 72.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 72.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 71.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 71.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 71.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 71.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 71.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 70.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 70.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 70.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 70.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 70.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 70.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 70.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 70.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 70.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 69.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 69.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 69.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 69.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 69.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 68.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 68.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 68.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 68.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 68.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.3
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 68.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 67.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 67.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 67.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 67.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 67.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 67.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 67.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 66.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 66.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 66.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 65.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 65.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 65.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 64.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 64.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 63.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 63.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 63.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 63.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 62.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 62.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 62.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 62.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 62.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 61.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 61.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 61.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 60.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 60.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 59.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 59.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 58.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 57.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 57.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 56.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 56.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 55.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 55.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 55.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

104.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 80.7
FF:10164-103B2 76 years, female 80.7
Nucleus accumbens
Scaled Tags Per Million: 62.8
FF:10037-101F1 23-56 years, mixed 62.8
Putamen
Scaled Tags Per Million: 104.8
FF:10176-103C5 60 years, female 104.8
Globus pallidus
Scaled Tags Per Million: 80.1
FF:10175-103C4 60 years, female 87.8
FF:10161-103A8 76 years, female 72.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.9
Pig sample Sample description nTPM
Caudate
nTPM: 61.5
Samples: 4

Max nTPM: 65.6
Min nTPM: 58.3
Sample A Female 62.5
Sample B Female 58.3
Sample C Male 65.6
Sample D Male 59.7
Putamen
nTPM: 74.9
Samples: 4

Max nTPM: 96.7
Min nTPM: 65.3
Sample A Female 71.4
Sample B Female 65.3
Sample C Male 96.7
Sample D Male 66.2
Septum
nTPM: 70.1
Samples: 4

Max nTPM: 79.0
Min nTPM: 59.1
Sample A Female 79.0
Sample B Female 66.8
Sample C Male 75.6
Sample D Male 59.1
Ventral pallidum
nTPM: 64.2
Samples: 4

Max nTPM: 75.1
Min nTPM: 52.0
Sample A Female 63.4
Sample B Female 75.1
Sample C Male 66.1
Sample D Male 52.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

232.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 203.8
Samples: 4

Max nTPM: 210.4
Min nTPM: 189.4
Sample A Male 210.4
Sample B Male 189.4
Sample C Female 205.2
Sample D Female 210.3
Septum
nTPM: 232.5
Samples: 4

Max nTPM: 250.6
Min nTPM: 214.2
Sample A Male 214.2
Sample B Male 250.6
Sample C Female 235.8
Sample D Female 229.3
Ventral forebrain
nTPM: 197.2
Samples: 4

Max nTPM: 214.1
Min nTPM: 188.1
Sample A Male 196.0
Sample B Male 188.1
Sample C Female 214.1
Sample D Female 190.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.1
69817408 Antisense, RP_050510_03_C12, Mouse strain C57BL/6J (56 days, male) 6.1
Pallidum
Expression energy: 6.2
69817408 Antisense, RP_050510_03_C12, Mouse strain C57BL/6J (56 days, male) 6.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org