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TPD52L2
HPA
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  • TPD52L2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

TPD52L2
Synonyms D54, hD54, TPD54
Gene descriptioni

Full gene name according to HGNC.

TPD52 like 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q13.33
Chromosome location (bp) 63865228 - 63891545
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

9
Ensembl ENSG00000101150 (version 109)
Entrez gene 7165
HGNC HGNC:12007
UniProt O43399 (UniProt - Evidence at protein level)
neXtProt NX_O43399
GeneCards TPD52L2
Antibodypedia TPD52L2 antibodies


PROTEIN FUNCTION
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the tumor protein D52-like family. These proteins are characterized by an N-terminal coiled-coil motif that is used to form homo- and heteromeric complexes with other tumor protein D52-like proteins. Expression of this gene may be a marker for breast cancer and acute lymphoblastic leukemia. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 12. [provided by RefSeq, Aug 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
TPD52L2-201
ENSP00000217121
ENST00000217121
O43399
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0110165 [cellular anatomical entity]
Show all
229 aa
24.9 kDa
No 0
TPD52L2-202
ENSP00000343547
ENST00000346249
O43399
[Direct mapping] Tumor protein D54
Show all
Q6FGS1
[Target identity:100%; Query identity:100%] TPD52L2 protein; Tumor protein D52-like 2, isoform CRA_a; cDNA, FLJ95317, highly similar to Homo sapiens tumor protein D52-like 2 (TPD52L2), mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0042127 [regulation of cell population proliferation]
GO:0042803 [protein homodimerization activity]
GO:0048471 [perinuclear region of cytoplasm]
GO:0110165 [cellular anatomical entity]
Show all
206 aa
22.2 kDa
No 0
TPD52L2-203
ENSP00000343554
ENST00000348257
O43399
[Direct mapping] Tumor protein D54
Show all
Q68E05
[Target identity:100%; Query identity:100%] Tumor protein D52-like 2, isoform CRA_f; Uncharacterized protein DKFZp686A1765; cDNA FLJ54053, highly similar to Homo sapiens tumor protein D52-like 2 (TPD52L2), transcript variant 6, mRNA
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0042127 [regulation of cell population proliferation]
GO:0042803 [protein homodimerization activity]
GO:0048471 [perinuclear region of cytoplasm]
GO:0110165 [cellular anatomical entity]
Show all
186 aa
19.9 kDa
No 0
TPD52L2-204
ENSP00000340006
ENST00000351424
O43399
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0110165 [cellular anatomical entity]
Show all
209 aa
22.5 kDa
No 0
TPD52L2-205
ENSP00000344647
ENST00000352482
O43399
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0110165 [cellular anatomical entity]
Show all
220 aa
23.8 kDa
No 0
TPD52L2-206
ENSP00000351350
ENST00000358548
O43399
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0110165 [cellular anatomical entity]
Show all
200 aa
21.4 kDa
No 0
TPD52L2-207
ENSP00000358943
ENST00000369927
O43399
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005975 [carbohydrate metabolic process]
GO:0110165 [cellular anatomical entity]
Show all
163 aa
17.5 kDa
No 0
TPD52L2-209
ENSP00000482370
ENST00000611972
A0A087WZ51
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0110165 [cellular anatomical entity]
Show all
152 aa
16.3 kDa
No 0
TPD52L2-210
ENSP00000482024
ENST00000615907
A0A087WYR3
[Direct mapping] Tumor protein D54
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0110165 [cellular anatomical entity]
Show all
222 aa
23.8 kDa
No 0

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