HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:49.5 nTPM
HPA Brain:113.7 nTPM
GTEx:49.5 nTPM
FANTOM5:114.2 Scaled Tags Per Million
Pig:65.5 nTPM
Mouse:119.0 nTPM
Allen mouse:16.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012737Antibody HPA013154
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 113.7
Sample id Sample description nTPM
Hippocampus
nTPM: 97.9
1898 Male, age 80, left hemisphere 117.3
2621 Female, age 67, right hemisphere 110.9
2148 Female, age 91, left hemisphere 105.2
1855 Male, age 76, left hemisphere 102.9
2529 Female, age 94, left hemisphere 78.2
1911 Female, age 85, right hemisphere 72.8
Dentate gyrus
nTPM: 102.5
1927 Female, age 91, both hemispheres 122.7
2530 Female, age 94, left hemisphere 106.8
2531 Female, age 67, both hemispheres 106.4
2010 Male, age 76, both hemispheres 104.3
2528 Male, age 74, both hemispheres 88.5
2246 Female, age 85, both hemispheres 86.2
Entorhinal gyrus
nTPM: 97.3
2613 Female, age 94, left hemisphere 120.5
2764 Male, age 80, right hemisphere 113.7
1938 Female, age 85, left hemisphere 100.2
1787 Male, age 76, left hemisphere 96.3
2686 Male, age 75, right hemisphere 80.7
2117 Female, age 91, right hemisphere 72.5
Hippocampus, CA1
nTPM: 109.9
2749 Male, age 80, left hemisphere 165.5
1873 Female, age 85, both hemispheres 103.9
2527 Male, age 74, both hemispheres 97.2
2045 Male, age 76, both hemispheres 97.0
2082 Female, age 91, right hemisphere 86.3
Hippocampus, CA2
nTPM: 98.0
1963 Male, age 80, left hemisphere 138.4
1892 Male, age 76, both hemispheres 120.4
2437 Female, age 94, left hemisphere 92.3
2113 Female, age 91, right hemisphere 82.3
1940 Female, age 85, left hemisphere 79.5
2249 Male, age 74, both hemispheres 75.4
Hippocampus, CA3
nTPM: 105.3
2137 Male, age 80, left hemisphere 136.4
2861 Female, age 67, both hemispheres 129.6
2620 Female, age 94, left hemisphere 113.9
1867 Male, age 76, both hemispheres 98.7
2436 Male, age 74, both hemispheres 80.8
1891 Female, age 85, both hemispheres 72.2
Parahippocampal cortex
nTPM: 93.9
1850 Male, age 80, both hemispheres 106.2
2245 Female, age 91, both hemispheres 105.9
1990 Female, age 91, right hemisphere 98.8
1933 Female, age 85, both hemispheres 96.7
2532 Female, age 72, left hemisphere 96.0
2693 Female, age 94, both hemispheres 94.5
2250 Female, age 67, right hemisphere 91.0
2622 Female, age 67, right hemisphere 90.2
2692 Male, age 74, both hemispheres 80.3
2018 Male, age 76, both hemispheres 79.4
Perirhinal gyrus
nTPM: 113.7
1847 Female, age 91, left hemisphere 137.0
2521 Female, age 94, right hemisphere 121.9
1794 Male, age 80, right hemisphere 115.8
1841 Female, age 85, right hemisphere 101.6
2848 Male, age 76, right hemisphere 92.0
Subiculum
nTPM: 78.5
1977 Female, age 85, both hemispheres 94.4
1901 Male, age 80, both hemispheres 86.3
2619 Male, age 74, both hemispheres 79.3
2729 Female, age 91, right hemisphere 74.9
2438 Female, age 94, left hemisphere 73.7
2042 Male, age 76, both hemispheres 62.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 49.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 49.5
Samples: 197

Max nTPM: 102.0
Min nTPM: 14.7
Std nTPM: 20.7
Median nTPM: 49.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 102.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 94.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 93.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 93.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 93.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 92.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 91.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 91.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 90.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 87.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 87.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 114.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.2
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 83.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 65.5
Pig sample Sample description nTPM
Subiculum
nTPM: 56.5
Samples: 4

Max nTPM: 70.6
Min nTPM: 46.0
Sample A Female 70.6
Sample B Female 50.5
Sample C Male 58.8
Sample D Male 46.0
Dorsal hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 64.5
Min nTPM: 40.2
Sample A Female 64.5
Sample B Female 61.0
Sample C Male 47.7
Sample D Male 40.2
Entorhinal cortex
nTPM: 65.5
Samples: 4

Max nTPM: 80.4
Min nTPM: 57.3
Sample A Female 63.1
Sample B Female 61.0
Sample C Male 80.4
Sample D Male 57.3
Ventral hippocampus
nTPM: 60.7
Samples: 4

Max nTPM: 84.3
Min nTPM: 42.4
Sample A Female 58.7
Sample B Female 42.4
Sample C Male 84.3
Sample D Male 57.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 119.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 119.0
Samples: 4

Max nTPM: 144.2
Min nTPM: 108.8
Sample A Male 110.8
Sample B Male 112.3
Sample C Female 108.8
Sample D Female 144.2
Hippocampal formation
nTPM: 114.3
Samples: 4

Max nTPM: 131.4
Min nTPM: 98.1
Sample A Male 109.6
Sample B Male 118.0
Sample C Female 131.4
Sample D Female 98.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 16.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.8
68795442 Antisense, RP_041130_01_E06, Mouse strain C57BL/6J (56 days, male) 16.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org