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HRH3
HPA
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PROTEIN SUMMARY GENE INFORMATION RNA DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

HRH3
Synonyms GPCR97
Gene descriptioni

Full gene name according to HGNC.

Histamine receptor H3
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

FDA approved drug targets
G-protein coupled receptors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband q13.33
Chromosome location (bp) 62214960 - 62220278
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000101180 (version 109)
Entrez gene 11255
HGNC HGNC:5184
UniProt Q9Y5N1 (UniProt - Evidence at protein level)
neXtProt NX_Q9Y5N1
GeneCards HRH3
Antibodypedia HRH3 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

The H3 subclass of histamine receptors could mediate the histamine signals in CNS and peripheral nervous system. Signals through the inhibition of adenylate cyclase and displays high constitutive activity (spontaneous activity in the absence of agonist). Agonist stimulation of isoform 3 neither modified adenylate cyclase activity nor induced intracellular calcium mobilization.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

G-protein coupled receptor, Receptor, Transducer
Gene summary (Entrez)i

Useful information about the gene from Entrez

Histamine is a ubiquitous messenger molecule released from mast cells, enterochromaffin-like cells, and neurons. Its various actions are mediated by histamine receptors H1, H2, H3 and H4. This gene encodes one of the histamine receptors (H3) which belongs to the family 1 of G protein-coupled receptors. It is an integral membrane protein and can regulate neurotransmitter release. This receptor can also increase voltage-dependent calcium current in smooth muscles and innervates the blood vessels and the heart in cardiovascular system. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
HRH3-201
ENSP00000321482
ENST00000317393
A0A0A0MR48
[Direct mapping] Histamine H3 receptor; Histamine receptor H3, isoform CRA_b
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
   DeepTMHMM predicted membrane proteins
Show all
GO:0001505 [regulation of neurotransmitter levels]
GO:0004930 [G protein-coupled receptor activity]
GO:0004969 [histamine receptor activity]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
373 aa
41.6 kDa
No 7
HRH3-202
ENSP00000342560
ENST00000340177
Q9Y5N1
[Direct mapping] Histamine H3 receptor
Show all
G-protein coupled receptors
   GPCRs excl olfactory receptors
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
FDA approved drug targets
   Small molecule drugs
Mapped to neXtProt
   neXtProt - Evidence at protein level
   DeepTMHMM predicted membrane proteins
Show all
GO:0001505 [regulation of neurotransmitter levels]
GO:0004930 [G protein-coupled receptor activity]
GO:0004969 [histamine receptor activity]
GO:0004993 [G protein-coupled serotonin receptor activity]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007187 [G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger]
GO:0007197 [adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway]
GO:0007268 [chemical synaptic transmission]
GO:0007269 [neurotransmitter secretion]
GO:0014050 [negative regulation of glutamate secretion]
GO:0014061 [regulation of norepinephrine secretion]
GO:0014063 [negative regulation of serotonin secretion]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016907 [G protein-coupled acetylcholine receptor activity]
GO:0030425 [dendrite]
GO:0030594 [neurotransmitter receptor activity]
GO:0045202 [synapse]
GO:0050890 [cognition]
GO:0098664 [G protein-coupled serotonin receptor signaling pathway]
GO:0098793 [presynapse]
Show all
445 aa
48.7 kDa
No 7

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