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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:126.6 nTPM
HPA Brain:100.3 nTPM
GTEx:126.6 nTPM
FANTOM5:103.7 Scaled Tags Per Million
Pig:147.9 nTPM
Mouse:178.8 nTPM
Allen mouse:1.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA047266Antibody CAB046007Antibody CAB046008
Glial cells Not detectedNot detectedLow
Neuronal cells LowLowMedium







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 93.8
2481 Female, age 94, left hemisphere 122.3
1781 Male, age 74, unknown 99.4
2288 Male, age 75, left hemisphere 95.3
2846 Female, age 79, unknown 93.5
2290 Female, age 72, unknown 92.5
1857 Female, age 85, left hemisphere 89.7
1854 Male, age 80, left hemisphere 83.7
2289 Male, age 61, right hemisphere 74.0
Globus pallidus, externus
nTPM: 98.3
2772 Female, age 79, unknown 118.5
1996 Male, age 80, right hemisphere 110.0
2395 Male, age 75, both hemispheres 103.7
2646 Male, age 61, right hemisphere 84.7
2567 Female, age 72, unknown 74.8
Globus pallidus, internus
nTPM: 100.3
2287 Male, age 75, right hemisphere 127.5
2483 Female, age 94, right hemisphere 116.5
1818 Male, age 74, unknown 99.1
2778 Female, age 91, both hemispheres 98.7
2037 Male, age 80, right hemisphere 94.0
2111 Female, age 85, right hemisphere 87.1
2566 Female, age 72, unknown 79.2
Nucleus accumbens
nTPM: 94.7
2286 Male, age 75, left hemisphere 104.9
1856 Female, age 91, right hemisphere 104.8
1806 Female, age 85, left hemisphere 103.3
1783 Male, age 74, unknown 100.0
2391 Female, age 94, left hemisphere 91.2
2732 Male, age 80, right hemisphere 86.0
2824 Male, age 61, right hemisphere 85.0
2698 Female, age 72, unknown 82.5
Nucleus basalis of Meynert
nTPM: 87.9
2484 Female, age 94, left hemisphere 95.7
2821 Male, age 75, both hemispheres 93.3
2393 Male, age 80, right hemisphere 82.8
2569 Male, age 61, both hemispheres 79.9
Nucleus of the diagonal band
nTPM: 90.9
1812 Female, age 91, both hemispheres 102.3
2775 Male, age 80, right hemisphere 97.4
2195 Female, age 85, both hemispheres 88.9
1979 Male, age 74, unknown 86.4
2029 Male, age 61, right hemisphere 79.5
Putamen
nTPM: 91.7
2466 Female, age 79, unknown 111.0
2482 Female, age 94, left hemisphere 108.0
1937 Female, age 91, right hemisphere 96.6
1838 Male, age 80, right hemisphere 88.7
1829 Male, age 74, unknown 84.3
2647 Male, age 75, left hemisphere 78.4
2489 Female, age 72, unknown 74.7
Septal nuclei
nTPM: 89.6
1960 Male, age 74, unknown 114.1
2031 Female, age 72, unknown 111.4
2059 Female, age 85, both hemispheres 89.0
2009 Female, age 91, both hemispheres 86.6
2199 Male, age 80, right hemisphere 80.4
2394 Male, age 61, left hemisphere 75.4
2629 Female, age 94, right hemisphere 70.6
Stria terminalis, bed nucleus
nTPM: 86.4
1974 Female, age 91, both hemispheres 99.2
2486 Female, age 94, both hemispheres 87.4
2201 Male, age 74, unknown 72.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 115.3
Samples: 246

Max nTPM: 212.3
Min nTPM: 77.3
Std nTPM: 22.9
Median nTPM: 112.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 212.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 208.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 192.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 190.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 187.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 180.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 175.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 167.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 162.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 161.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 160.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 159.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 156.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 155.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 155.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 154.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 151.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 151.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 148.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 147.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 146.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 145.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 145.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 144.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 142.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 140.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 140.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 139.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 137.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 136.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 136.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 135.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 135.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 135.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 134.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 134.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 134.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 133.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 133.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 132.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 132.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 131.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 130.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 130.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 130.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 130.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 129.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 129.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 129.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 128.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 127.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 127.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 127.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 126.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 126.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 126.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 126.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 125.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 125.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 125.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 125.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 125.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 125.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 123.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 123.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 123.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 123.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 123.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 123.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 123.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 122.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 121.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 121.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 121.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 121.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 121.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 121.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 120.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 120.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 120.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 119.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 119.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 119.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 119.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 118.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 118.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 118.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 117.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 117.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 117.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 117.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 117.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 117.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 116.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 115.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 115.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 115.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 115.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 115.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 114.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 114.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 114.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 114.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 114.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 113.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 113.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 113.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 113.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 113.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 113.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 113.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 113.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 112.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 112.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 112.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 112.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 111.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 111.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 111.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 111.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 110.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 110.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 110.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 110.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 110.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 110.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 110.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 110.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 109.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 109.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 109.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 108.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 108.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 108.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 107.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 107.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 107.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 107.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 107.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 107.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 107.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 107.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 106.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 106.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 106.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 106.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 106.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 106.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 106.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 106.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 105.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 105.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 105.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 104.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 104.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 103.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 103.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 103.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 102.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 102.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 102.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 101.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 101.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 101.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 101.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 100.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 100.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 100.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 100.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 99.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 99.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 99.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 99.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 99.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 99.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 99.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 98.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 98.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 98.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 98.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 97.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 97.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 97.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 97.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 97.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 97.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 97.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 95.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 95.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 94.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 93.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 93.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 93.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 93.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 92.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 92.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 92.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 92.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 92.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 91.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 91.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 91.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 91.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 91.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 90.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 90.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 90.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 90.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 90.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 88.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 88.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 88.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 88.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 88.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 87.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 87.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 87.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 87.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 86.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 86.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 85.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 85.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 83.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 83.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 83.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 82.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 82.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 80.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 77.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 77.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 119.3
Samples: 246

Max nTPM: 209.1
Min nTPM: 71.2
Std nTPM: 22.0
Median nTPM: 118.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 209.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 191.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 179.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 178.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 173.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 172.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 169.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 168.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 166.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 165.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 163.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 161.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 160.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 157.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 156.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 154.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 154.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 154.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 153.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 152.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 151.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 150.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 149.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 147.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 146.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 144.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 144.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 144.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 143.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 143.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 141.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 141.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 141.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 140.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 140.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 140.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 140.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 140.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 139.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 139.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 138.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 138.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 138.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 137.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 136.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 135.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 135.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 134.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 134.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 134.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 134.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 133.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 133.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 132.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 132.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 131.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 131.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 131.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 131.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 130.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 130.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 130.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 130.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 129.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 129.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 129.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 129.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 129.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 129.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 129.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 128.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 128.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 128.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 128.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 128.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 128.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 128.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 128.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 127.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 127.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 127.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 126.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 126.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 126.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 125.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 125.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 125.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 125.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 125.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 125.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 125.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 124.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 124.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 124.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 124.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 124.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 124.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 123.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 123.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 123.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 123.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 123.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 123.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 123.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 122.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 122.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 122.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 121.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 121.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 121.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 120.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 120.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 120.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 120.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 120.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 119.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 119.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 119.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 119.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 119.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 119.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 119.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 118.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 118.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 118.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 118.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 118.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 117.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 117.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 117.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 117.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 116.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 116.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 116.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 115.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 115.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 115.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 115.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 114.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 114.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 114.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 113.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 113.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 113.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 113.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 113.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 112.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 112.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 112.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 112.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 111.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 111.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 111.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 110.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 110.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 110.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 110.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 110.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 110.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 109.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 109.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 109.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 109.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 109.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 109.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 109.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 109.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 108.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 107.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 106.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 106.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 106.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 106.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 105.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 105.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 105.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 105.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 105.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 105.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 105.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 105.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 104.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 104.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 104.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 104.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 103.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 103.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 103.3
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 103.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 103.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 102.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 101.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 101.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 100.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 100.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 100.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 99.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 99.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 99.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 99.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 99.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 99.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 98.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 98.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 97.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 97.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 97.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 96.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 96.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 95.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 95.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 95.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 95.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 95.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 95.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 94.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 94.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 94.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 93.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 93.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 93.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 92.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 92.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 92.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 92.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 91.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 91.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 90.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 90.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 90.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 89.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 88.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 88.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 87.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 86.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 85.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 85.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 85.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 85.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 83.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 82.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 81.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 77.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 76.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 74.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 71.2
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Brain - Putamen (basal ganglia)
Average nTPM: 126.6
Samples: 205

Max nTPM: 253.4
Min nTPM: 81.9
Std nTPM: 24.0
Median nTPM: 121.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 253.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 226.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 199.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 188.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 184.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 180.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 179.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 178.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 175.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 174.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 173.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 171.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 168.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 165.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 162.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 162.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 161.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 160.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 160.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 159.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 159.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 158.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 153.5
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 152.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 151.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 150.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 150.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 149.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 149.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 149.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 148.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 146.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 146.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 146.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 145.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 145.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 145.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 144.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 143.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 142.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 142.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 141.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 141.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 140.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 140.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 140.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 140.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 139.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 139.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 138.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 138.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 137.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 136.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 136.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 136.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 136.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 136.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 135.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 134.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 134.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 134.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 133.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 132.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 132.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 132.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 132.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 132.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 131.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 131.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 131.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 131.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 130.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 130.2
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 130.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 130.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 129.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 129.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 129.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 129.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 128.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 128.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 127.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 126.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 126.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 126.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 126.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 126.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 125.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 125.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 124.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 124.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 124.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 124.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 124.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 124.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 123.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 123.8
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 123.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 123.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 123.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 123.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 122.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 121.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 121.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 121.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 120.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 120.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 120.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 120.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 119.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 119.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 119.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 119.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 119.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 119.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 119.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 119.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 118.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 118.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 118.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 118.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 117.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 117.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 117.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 117.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 117.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 117.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 117.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 117.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 116.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 116.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 116.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 116.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 115.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 115.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 115.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 115.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 114.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 114.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 114.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 113.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 113.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 113.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 113.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 113.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 112.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 112.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 112.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 111.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 111.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 110.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 110.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 109.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 109.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 109.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 109.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 109.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 109.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 109.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 108.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 108.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 108.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 108.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 108.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 107.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 107.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 107.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 107.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 106.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 106.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 106.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 106.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 106.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 105.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 104.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 103.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 103.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 103.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 103.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 103.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 102.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 102.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 102.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 102.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 101.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 101.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 101.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 100.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 99.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 99.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 99.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 98.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 97.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 97.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 96.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 95.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 94.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 94.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 91.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 90.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 90.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 87.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 85.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 81.9
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

103.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 86.7
FF:10164-103B2 76 years, female 86.7
Nucleus accumbens
Scaled Tags Per Million: 76.3
FF:10037-101F1 23-56 years, mixed 76.3
Putamen
Scaled Tags Per Million: 94.7
FF:10176-103C5 60 years, female 94.7
Globus pallidus
Scaled Tags Per Million: 103.7
FF:10175-103C4 60 years, female 130.2
FF:10161-103A8 76 years, female 77.1

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

147.9
Pig sample Sample description nTPM
Caudate
nTPM: 137.6
Samples: 4

Max nTPM: 161.3
Min nTPM: 121.6
Sample A Female 135.5
Sample B Female 131.9
Sample C Male 161.3
Sample D Male 121.6
Putamen
nTPM: 147.9
Samples: 4

Max nTPM: 182.6
Min nTPM: 116.2
Sample A Female 144.8
Sample B Female 116.2
Sample C Male 182.6
Sample D Male 148.0
Septum
nTPM: 129.9
Samples: 4

Max nTPM: 156.6
Min nTPM: 118.9
Sample A Female 156.6
Sample B Female 118.9
Sample C Male 120.1
Sample D Male 124.1
Ventral pallidum
nTPM: 127.2
Samples: 4

Max nTPM: 137.9
Min nTPM: 116.9
Sample A Female 137.9
Sample B Female 134.4
Sample C Male 116.9
Sample D Male 119.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

178.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 172.0
Samples: 4

Max nTPM: 178.2
Min nTPM: 167.2
Sample A Male 178.2
Sample B Male 172.8
Sample C Female 167.2
Sample D Female 169.8
Septum
nTPM: 178.8
Samples: 4

Max nTPM: 189.8
Min nTPM: 170.1
Sample A Male 170.1
Sample B Male 189.8
Sample C Female 178.1
Sample D Female 177.1
Ventral forebrain
nTPM: 178.7
Samples: 4

Max nTPM: 189.0
Min nTPM: 166.7
Sample A Male 175.1
Sample B Male 166.7
Sample C Female 189.0
Sample D Female 183.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.7
75198064 Antisense, RP_060502_01_F05, Mouse strain C57BL/6J (56 days, male) 1.7
Pallidum
Expression energy: 1.6
75198064 Antisense, RP_060502_01_F05, Mouse strain C57BL/6J (56 days, male) 1.6

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