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SLCO4A1
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  • SLCO4A1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:21.3 nTPM
HPA Brain:14.6 nTPM
GTEx:21.3 nTPM
FANTOM5:85.0 Scaled Tags Per Million
Pig:1.8 nTPM
Mouse:0.7 nTPM
Allen mouse:2.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030669Antibody HPA030670
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

14.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 13.9
1781 Male, age 74, unknown 32.6
2481 Female, age 94, left hemisphere 15.4
2290 Female, age 72, unknown 14.1
1854 Male, age 80, left hemisphere 13.1
2846 Female, age 79, unknown 12.5
1857 Female, age 85, left hemisphere 8.8
2289 Male, age 61, right hemisphere 8.2
2288 Male, age 75, left hemisphere 6.6
Globus pallidus, externus
nTPM: 12.4
1996 Male, age 80, right hemisphere 16.2
2646 Male, age 61, right hemisphere 14.2
2567 Female, age 72, unknown 12.6
2772 Female, age 79, unknown 9.9
2395 Male, age 75, both hemispheres 8.9
Globus pallidus, internus
nTPM: 12.6
2483 Female, age 94, right hemisphere 17.7
2037 Male, age 80, right hemisphere 16.1
2287 Male, age 75, right hemisphere 14.1
2566 Female, age 72, unknown 12.3
2778 Female, age 91, both hemispheres 11.9
2111 Female, age 85, right hemisphere 8.7
1818 Male, age 74, unknown 7.6
Nucleus accumbens
nTPM: 9.1
1783 Male, age 74, unknown 12.3
1856 Female, age 91, right hemisphere 10.9
2391 Female, age 94, left hemisphere 10.5
1806 Female, age 85, left hemisphere 10.0
2698 Female, age 72, unknown 9.9
2732 Male, age 80, right hemisphere 8.0
2286 Male, age 75, left hemisphere 6.5
2824 Male, age 61, right hemisphere 4.8
Nucleus basalis of Meynert
nTPM: 14.6
2484 Female, age 94, left hemisphere 19.2
2569 Male, age 61, both hemispheres 17.4
2393 Male, age 80, right hemisphere 11.1
2821 Male, age 75, both hemispheres 10.8
Nucleus of the diagonal band
nTPM: 9.7
2029 Male, age 61, right hemisphere 11.0
2195 Female, age 85, both hemispheres 10.9
1979 Male, age 74, unknown 9.9
2775 Male, age 80, right hemisphere 8.5
1812 Female, age 91, both hemispheres 8.0
Putamen
nTPM: 12.5
2489 Female, age 72, unknown 16.3
2482 Female, age 94, left hemisphere 15.3
2466 Female, age 79, unknown 15.1
1838 Male, age 80, right hemisphere 12.3
1937 Female, age 91, right hemisphere 11.4
2647 Male, age 75, left hemisphere 8.9
1829 Male, age 74, unknown 8.2
Septal nuclei
nTPM: 10.2
2394 Male, age 61, left hemisphere 16.6
2031 Female, age 72, unknown 11.0
1960 Male, age 74, unknown 10.7
2199 Male, age 80, right hemisphere 10.7
2059 Female, age 85, both hemispheres 9.8
2009 Female, age 91, both hemispheres 7.1
2629 Female, age 94, right hemisphere 5.7
Stria terminalis, bed nucleus
nTPM: 7.5
2201 Male, age 74, unknown 8.6
1974 Female, age 91, both hemispheres 8.1
2486 Female, age 94, both hemispheres 5.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 17.0
Samples: 246

Max nTPM: 115.2
Min nTPM: 1.1
Std nTPM: 21.0
Median nTPM: 7.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 115.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 111.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 93.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 90.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 86.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 82.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 78.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 75.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 74.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 72.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 72.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 68.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 67.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 66.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 59.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 56.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 55.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 53.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 51.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 51.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 50.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 46.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 43.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 41.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 39.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 38.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 38.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 38.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 37.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 37.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 37.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 33.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 33.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 32.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 32.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 31.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 31.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 30.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 30.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 29.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 29.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 28.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 28.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 28.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 28.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 27.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 26.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 26.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 25.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 25.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 25.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 23.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 23.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 22.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 22.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 22.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 21.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 20.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 20.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 19.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 18.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 18.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 18.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 18.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 18.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 18.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 18.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 17.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 17.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 17.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 16.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 16.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 16.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 16.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 16.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 15.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 15.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 15.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 15.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 15.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 14.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 14.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 14.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 13.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 13.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 13.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 13.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 13.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 12.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 12.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 12.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 12.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 11.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 11.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 11.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 10.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 10.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 10.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 9.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 9.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 9.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 9.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 8.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 8.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 8.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 8.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 8.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 8.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 8.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 8.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 7.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 7.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 7.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 7.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 7.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 7.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 7.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 7.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 7.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 7.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 7.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 6.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 6.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 6.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 6.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 6.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 6.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 6.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 6.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 6.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 6.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 6.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 6.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 5.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 5.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 5.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 5.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 5.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 5.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 5.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 5.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 5.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 5.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 5.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 5.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 5.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 4.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 4.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 4.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 4.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 4.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 4.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 4.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 4.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 4.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 4.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 3.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 3.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 3.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 3.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 3.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 3.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 3.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 3.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 3.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 3.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 3.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 3.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 3.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 3.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 3.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 3.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 3.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 3.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 3.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 3.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 3.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 3.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 3.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 3.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 2.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 2.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 2.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 2.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 2.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 2.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 2.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 2.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 2.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 2.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 2.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 2.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 2.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 2.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 2.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 2.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 2.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 2.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 2.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 1.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 1.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 1.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 1.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 16.8
Samples: 246

Max nTPM: 209.1
Min nTPM: 0.9
Std nTPM: 29.7
Median nTPM: 6.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 209.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 203.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 187.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 178.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 119.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 91.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 91.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 87.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 81.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 79.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 75.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 71.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 68.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 66.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 66.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 65.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 62.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 59.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 56.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 54.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 50.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 46.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 45.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 39.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 37.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 36.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 35.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 32.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 31.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 30.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 30.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 30.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 28.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 27.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 27.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 27.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 26.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 26.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 26.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 26.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 25.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 24.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 24.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 24.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 23.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 22.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 21.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 20.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 20.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 19.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 18.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 18.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 18.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 18.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 18.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 18.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 17.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 17.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 17.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 17.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 17.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 16.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 16.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 15.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 15.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 15.1
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 14.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 14.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 14.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 14.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 13.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 13.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 13.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 13.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 13.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 13.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 12.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 12.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 12.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 12.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 12.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 12.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 11.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 11.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 11.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 11.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 11.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 11.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 11.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 10.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 10.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 10.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 10.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 10.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 9.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 9.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 9.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 9.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 9.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 9.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 8.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 8.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 8.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 8.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 8.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 8.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 7.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 7.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 7.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 7.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 7.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 7.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 7.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 6.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 6.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 6.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 6.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 6.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 6.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 6.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 6.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 6.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 6.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 6.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 6.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 5.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 5.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 5.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 5.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 5.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 5.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 5.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 5.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 5.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 5.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 5.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 5.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 4.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 4.8
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 4.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 4.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 4.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 4.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 4.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 4.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 4.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 4.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 4.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 4.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 3.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 3.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 3.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 3.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 3.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 3.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 3.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 3.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 3.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 3.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 3.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 3.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 3.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 3.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 3.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 3.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 3.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 3.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 3.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 3.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 2.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 2.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 2.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 2.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 2.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 2.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 2.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 2.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 2.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 2.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 2.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 2.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 2.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 2.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 2.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 2.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 2.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 2.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 2.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 2.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 2.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 2.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 2.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 2.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 2.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 2.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 2.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 2.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 2.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 2.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 2.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 2.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 2.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 2.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 1.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 1.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 1.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 1.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 1.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 1.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 1.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 1.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 1.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 1.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 1.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 1.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 1.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 1.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 1.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 1.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 1.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 1.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 0.9
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Brain - Putamen (basal ganglia)
Average nTPM: 21.3
Samples: 205

Max nTPM: 170.1
Min nTPM: 0.9
Std nTPM: 30.3
Median nTPM: 9.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 170.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 143.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 138.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 134.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 124.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 119.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 117.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 114.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 108.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 106.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 99.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 92.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 85.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 77.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 75.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 55.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 51.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 51.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 50.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 50.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 47.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 47.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 46.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 44.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 43.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 40.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 40.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 39.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 37.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 37.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 34.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 33.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 33.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 32.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 31.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 30.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 30.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 30.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 29.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 29.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 29.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 28.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 27.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 27.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 25.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 24.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 24.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 23.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 23.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 23.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 23.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 23.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 22.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 22.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 22.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 21.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 21.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 21.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 21.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 21.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 20.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 19.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 18.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 18.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 18.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 17.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 16.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 16.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 16.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 16.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 15.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 15.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 15.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 15.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 15.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 15.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 14.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 14.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 13.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 13.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 12.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 12.3
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 12.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 11.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 11.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 11.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 11.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 10.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 10.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 10.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 10.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 10.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 10.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 10.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 9.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 9.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 9.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 9.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 8.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 8.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 8.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 8.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 7.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 7.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 7.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 7.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 7.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 7.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 7.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 6.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 6.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 6.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 6.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 6.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 6.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 6.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 6.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 6.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 6.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 5.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 5.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 5.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 5.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 5.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 5.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 4.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 4.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 4.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 4.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 4.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 4.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 4.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 4.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 4.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 4.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 4.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 4.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 4.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 4.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 4.2
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 4.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 4.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 4.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 3.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 3.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 3.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 3.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 3.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 3.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 3.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 3.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 3.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 3.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 3.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 3.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 3.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 3.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 3.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 3.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 3.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 3.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 3.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 2.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 2.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 2.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 2.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 2.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 2.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 2.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 2.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 2.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 2.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 2.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 2.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 2.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 2.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 2.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 2.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 1.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 1.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 1.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 0.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

85.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 79.4
FF:10164-103B2 76 years, female 79.4
Nucleus accumbens
Scaled Tags Per Million: 12.6
FF:10037-101F1 23-56 years, mixed 12.6
Putamen
Scaled Tags Per Million: 23.8
FF:10176-103C5 60 years, female 23.8
Globus pallidus
Scaled Tags Per Million: 85.0
FF:10161-103A8 76 years, female 108.0
FF:10175-103C4 60 years, female 61.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.8
Pig sample Sample description nTPM
Caudate
nTPM: 1.8
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.5
Sample A Female 1.9
Sample B Female 1.9
Sample C Male 1.5
Sample D Male 1.9
Putamen
nTPM: 1.5
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.9
Sample A Female 1.5
Sample B Female 1.9
Sample C Male 0.9
Sample D Male 1.5
Septum
nTPM: 1.6
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.4
Sample A Female 1.4
Sample B Female 1.4
Sample C Male 1.8
Sample D Male 1.9
Ventral pallidum
nTPM: 1.5
Samples: 4

Max nTPM: 1.6
Min nTPM: 1.4
Sample A Female 1.5
Sample B Female 1.4
Sample C Male 1.5
Sample D Male 1.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

0.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.1
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.4
Sample C Female 0.0
Sample D Female 0.0
Septum
nTPM: 0.6
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.4
Sample A Male 0.7
Sample B Male 0.5
Sample C Female 0.6
Sample D Female 0.4
Ventral forebrain
nTPM: 0.8
Samples: 4

Max nTPM: 1.2
Min nTPM: 0.5
Sample A Male 0.5
Sample B Male 0.5
Sample C Female 1.2
Sample D Female 0.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.8
2625 Antisense, RP_040507_02_D01, Mouse strain C57BL/6J (56 days, male) 1.8
2626 Antisense, RP_040507_02_D01, Mouse strain C57BL/6J (56 days, male) 1.8
Pallidum
Expression energy: 2.2
2626 Antisense, RP_040507_02_D01, Mouse strain C57BL/6J (56 days, male) 2.2
2625 Antisense, RP_040507_02_D01, Mouse strain C57BL/6J (56 days, male) 1.9

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