PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:540.4 nTPM
FANTOM5:327.0 Scaled Tags Per Million
Pig:737.9 nTPM
Mouse:477.8 nTPM
Allen mouse:16.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 540.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 216.9
1984 Male, age 76, both hemispheres 324.2
2301 Female, age 85, both hemispheres 233.3
2188 Female, age 91, both hemispheres 185.6
2090 Male, age 80, both hemispheres 124.3
Area postrema
nTPM: 81.8
2054 Male, age 76, both hemispheres 185.7
2306 Male, age 80, both hemispheres 36.4
2799 Male, age 61, both hemispheres 23.3
Dorsal cochlear nucleus
nTPM: 186.7
2187 Female, age 91, both hemispheres 231.7
2058 Male, age 76, both hemispheres 223.1
2370 Male, age 61, both hemispheres 187.6
2802 Male, age 74, right hemisphere 156.5
2378 Male, age 80, both hemispheres 134.5
Dorsal medullary reticular nucleus
nTPM: 300.0
2040 Female, age 85, both hemispheres 466.3
2088 Male, age 76, both hemispheres 233.6
2373 Male, age 61, both hemispheres 200.0
Dorsal motor vagal complex
nTPM: 222.6
2133 Female, age 91, both hemispheres 462.7
2000 Male, age 74, unknown 350.3
2844 Male, age 55, unknown 264.6
2813 Female, age 72, unknown 203.8
2185 Male, age 76, both hemispheres 159.2
2807 Female, age 85, both hemispheres 122.8
2797 Male, age 61, both hemispheres 113.4
2643 Male, age 74, both hemispheres 104.0
Dorsal tegmental nucleus
nTPM: 219.7
2083 Male, age 80, both hemispheres 281.2
1936 Male, age 76, left hemisphere 255.1
2358 Male, age 61, both hemispheres 205.3
2326 Male, age 74, both hemispheres 137.4
Dorsolateral tegmental area
nTPM: 198.7
2654 Male, age 80, both hemispheres 261.1
2141 Male, age 76, both hemispheres 253.4
2751 Female, age 85, both hemispheres 246.1
2360 Male, age 74, both hemispheres 130.1
2337 Male, age 61, both hemispheres 102.7
Gigantocellular reticular nuclei, medullary
nTPM: 309.4
2462 Male, age 74, both hemispheres 694.1
2310 Male, age 80, both hemispheres 287.1
2022 Male, age 76, right hemisphere 273.4
1876 Female, age 85, both hemispheres 261.1
2387 Female, age 91, both hemispheres 180.6
2314 Male, age 61, both hemispheres 160.2
Gigantocellular reticular nuclei, pars
nTPM: 351.2
2168 Male, age 76, both hemispheres 538.1
2084 Female, age 85, both hemispheres 408.0
2336 Male, age 61, both hemispheres 322.7
2330 Male, age 80, both hemispheres 249.8
2706 Male, age 80, both hemispheres 237.6
Inferior olive
nTPM: 137.3
2085 Female, age 85, both hemispheres 283.3
2628 Female, age 91, both hemispheres 149.0
2178 Male, age 61, both hemispheres 104.8
2379 Male, age 80, both hemispheres 80.2
2563 Male, age 74, both hemispheres 69.1
Kolliker-Fuse nucleus
nTPM: 303.4
2163 Male, age 80, both hemispheres 461.4
2793 Female, age 91, left hemisphere 288.3
2315 Male, age 76, right hemisphere 160.5
Lateral lemniscal nuclei
nTPM: 424.8
2169 Male, age 76, both hemispheres 554.5
2453 Male, age 74, right hemisphere 540.1
2746 Female, age 85, left hemisphere 417.6
2036 Male, age 80, both hemispheres 315.0
2320 Female, age 91, left hemisphere 296.6
Lateral medullary reticular nucleus
nTPM: 215.5
2044 Male, age 76, both hemispheres 426.1
2190 Female, age 85, both hemispheres 231.5
2374 Male, age 61, both hemispheres 193.6
2804 Female, age 91, both hemispheres 189.6
2852 Male, age 80, both hemispheres 128.8
2305 Male, age 74, both hemispheres 123.3
Lateral parabrachial nucleus
nTPM: 270.4
2139 Female, age 85, right hemisphere 481.1
2790 Male, age 61, both hemispheres 267.1
2013 Male, age 80, both hemispheres 244.6
2792 Male, age 76, both hemispheres 88.6
Lateral vestibular nucleus
nTPM: 345.5
2184 Male, age 76, both hemispheres 474.0
2311 Male, age 80, both hemispheres 217.0
Locus coeruleus
nTPM: 425.5
2123 Female, age 91, both hemispheres 681.3
2720 Male, age 74, both hemispheres 594.8
1980 Male, age 76, both hemispheres 398.6
2014 Male, age 55, unknown 388.4
2317 Female, age 72, unknown 352.3
2162 Male, age 80, both hemispheres 349.9
2788 Male, age 74, unknown 213.2
Medial olivary nucleus
nTPM: 78.2
2851 Male, age 80, both hemispheres 140.1
1962 Male, age 76, both hemispheres 90.7
2138 Female, age 91, both hemispheres 51.9
1943 Male, age 61, both hemispheres 30.0
Medial parabrachial nucleus
nTPM: 289.0
2156 Male, age 61, both hemispheres 337.5
2854 Male, age 80, both hemispheres 305.7
2170 Female, age 91, both hemispheres 283.6
2463 Female, age 85, right hemisphere 265.8
2786 Male, age 76, both hemispheres 252.4
Medial periolivary nuclei
nTPM: 393.9
2171 Female, age 85, both hemispheres 661.8
2063 Male, age 76, both hemispheres 547.2
2791 Male, age 74, right hemisphere 329.8
2458 Female, age 91, both hemispheres 219.5
2081 Male, age 80, both hemispheres 211.0
Medial vestibular nucleus
nTPM: 374.9
2134 Male, age 76, both hemispheres 474.5
2624 Male, age 61, both hemispheres 394.1
2093 Male, age 80, both hemispheres 382.4
2743 Female, age 85, both hemispheres 358.8
2803 Female, age 91, both hemispheres 333.4
2801 Male, age 74, both hemispheres 306.0
Motor facial nucleus
nTPM: 412.0
2062 Male, age 76, both hemispheres 627.8
2365 Male, age 74, right hemisphere 464.3
2327 Male, age 80, both hemispheres 415.7
2697 Female, age 85, both hemispheres 392.6
2795 Female, age 91, both hemispheres 297.5
2126 Male, age 61, both hemispheres 274.3
Motor hypoglossal nucleus
nTPM: 344.3
2125 Female, age 91, both hemispheres 426.7
2461 Male, age 61, both hemispheres 424.1
2132 Female, age 85, both hemispheres 394.2
2182 Male, age 80, both hemispheres 270.0
2277 Male, age 76, both hemispheres 206.6
Motor trigeminal nucleus
nTPM: 307.0
2560 Male, age 74, both hemispheres 383.3
2079 Male, age 80, both hemispheres 377.4
2335 Male, age 61, both hemispheres 289.6
2309 Male, age 76, both hemispheres 268.4
2321 Female, age 91, both hemispheres 216.4
Nuclei of the trapezoid body
nTPM: 491.6
2159 Male, age 61, both hemispheres 651.1
2735 Female, age 85, both hemispheres 638.0
1983 Male, age 76, both hemispheres 585.2
2166 Male, age 80, both hemispheres 325.1
2368 Female, age 91, both hemispheres 258.4
Nucleus ambiguus
nTPM: 354.5
2096 Female, age 85, both hemispheres 592.7
2071 Male, age 76, both hemispheres 116.2
Nucleus cuneatus
nTPM: 187.2
2131 Male, age 76, both hemispheres 447.0
2100 Male, age 76, both hemispheres 313.3
2562 Male, age 61, both hemispheres 211.5
2376 Male, age 61, both hemispheres 183.7
2564 Male, age 74, both hemispheres 183.7
2381 Male, age 80, both hemispheres 128.9
2805 Female, age 91, both hemispheres 86.3
2808 Female, age 85, both hemispheres 83.7
2380 Male, age 80, both hemispheres 46.5
Nucleus gracilis
nTPM: 66.6
2627 Male, age 74, both hemispheres 82.6
2299 Female, age 85, both hemispheres 63.8
2382 Male, age 80, both hemispheres 53.4
Nucleus raphe magnus
nTPM: 540.4
2160 Male, age 61, both hemispheres 770.7
2172 Female, age 85, both hemispheres 717.6
2455 Male, age 74, both hemispheres 661.1
2051 Male, age 76, both hemispheres 444.4
2328 Male, age 80, both hemispheres 389.2
2459 Female, age 91, both hemispheres 259.2
Nucleus raphe obscurus
nTPM: 165.4
2800 Male, age 61, midline 241.2
2845 Female, age 85, midline 212.8
2142 Male, age 76, midline 42.1
Nucleus raphe pallidus
nTPM: 189.2
2183 Male, age 80, midline 323.6
1924 Male, age 61, midline 163.7
2145 Male, age 76, midline 80.4
Nucleus tractus solitarii
nTPM: 196.5
2191 Female, age 85, both hemispheres 219.9
2656 Male, age 76, both hemispheres 217.7
2307 Male, age 80, both hemispheres 191.6
2144 Female, age 91, right hemisphere 156.8
Paramedian reticular nucleus
nTPM: 356.9
2050 Female, age 85, both hemispheres 493.3
2313 Male, age 61, both hemispheres 404.8
2057 Male, age 80, both hemispheres 356.5
2052 Male, age 76, both hemispheres 172.8
Parvicellular reticular nuclei
nTPM: 385.4
2558 Male, age 74, both hemispheres 568.6
2095 Male, age 76, both hemispheres 294.8
2119 Male, age 80, both hemispheres 292.8
Parvicellular reticular nuclei, medullary
nTPM: 377.3
2189 Female, age 91, both hemispheres 429.6
2091 Female, age 85, both hemispheres 414.6
2181 Male, age 80, left hemisphere 287.7
Pedunculopontine tegmental nucleus
nTPM: 248.2
1921 Female, age 85, both hemispheres 278.9
2334 Male, age 80, both hemispheres 265.3
2338 Male, age 61, both hemispheres 200.4
Peritrigeminal nucleus
nTPM: 316.6
2179 Male, age 61, both hemispheres 329.7
2067 Female, age 85, both hemispheres 322.6
2136 Male, age 76, both hemispheres 297.7
Pontine nuclei
nTPM: 484.5
2787 Female, age 85, both hemispheres 817.7
2727 Male, age 61, right hemisphere 644.1
1968 Male, age 76, left hemisphere 579.6
1863 Male, age 55, unknown 521.2
2109 Female, age 72, unknown 465.3
2454 Male, age 74, left hemisphere 318.5
2115 Male, age 80, left hemisphere 292.4
2319 Female, age 91, both hemispheres 236.9
Pontine raphe nucleus
nTPM: 344.0
2122 Female, age 85, midline 403.6
2853 Male, age 76, midline 284.5
Posteroventral cochlear nucleus
nTPM: 191.3
2752 Female, age 85, both hemispheres 378.4
2070 Male, age 76, both hemispheres 265.4
2371 Male, age 61, both hemispheres 179.5
2341 Male, age 80, both hemispheres 83.9
2135 Female, age 91, both hemispheres 49.5
Prepositus hypoglossal nucleus
nTPM: 274.1
2855 Female, age 85, right hemisphere 309.4
2086 Male, age 80, both hemispheres 238.7
Principal sensory trigeminal nucleus
nTPM: 442.1
2158 Male, age 61, both hemispheres 682.1
2008 Male, age 80, left hemisphere 449.8
2324 Male, age 76, both hemispheres 396.4
2367 Female, age 91, left hemisphere 239.9
Reticular pontine nucleus, caudal
nTPM: 321.6
2332 Male, age 80, right hemisphere 484.4
2092 Male, age 76, both hemispheres 394.4
2457 Female, age 91, both hemispheres 228.0
2559 Male, age 74, both hemispheres 179.4
Reticular pontine nucleus, oral
nTPM: 310.4
2361 Male, age 74, both hemispheres 426.4
2012 Female, age 85, both hemispheres 401.6
1939 Male, age 80, both hemispheres 257.2
2167 Male, age 76, both hemispheres 248.7
2366 Female, age 91, both hemispheres 218.1
Reticulotegmental nucleus
nTPM: 307.5
2325 Male, age 76, both hemispheres 399.1
2452 Male, age 74, both hemispheres 296.5
2333 Male, age 80, both hemispheres 287.2
2322 Female, age 91, both hemispheres 247.1
Spinal trigeminal nucleus, caudal
nTPM: 314.7
2390 Female, age 91, both hemispheres 576.8
2447 Male, age 76, both hemispheres 409.2
2642 Male, age 74, both hemispheres 206.7
2308 Male, age 80, both hemispheres 200.7
2312 Male, age 61, both hemispheres 180.3
Spinal trigeminal nucleus, interpolar
nTPM: 426.2
2625 Male, age 61, both hemispheres 758.6
2066 Male, age 76, right hemisphere 394.9
2389 Female, age 91, both hemispheres 373.8
2033 Male, age 80, both hemispheres 340.3
2386 Female, age 85, both hemispheres 263.3
Spinal trigeminal nucleus, oral
nTPM: 358.7
2737 Female, age 85, both hemispheres 409.9
2164 Male, age 80, both hemispheres 394.8
1978 Male, age 76, both hemispheres 271.5
Spinal vestibular nucleus
nTPM: 293.6
2186 Female, age 91, both hemispheres 394.5
2780 Male, age 80, both hemispheres 368.4
2748 Male, age 76, both hemispheres 291.2
2806 Female, age 85, both hemispheres 276.5
2796 Male, age 61, both hemispheres 266.0
2384 Male, age 74, both hemispheres 165.2
Subcoeruleus area
nTPM: 305.1
2323 Female, age 91, left hemisphere 396.7
2089 Male, age 76, left hemisphere 389.0
1958 Male, age 80, both hemispheres 347.7
2451 Male, age 74, both hemispheres 211.2
2369 Female, age 85, left hemisphere 181.1
Superior olive
nTPM: 382.3
1875 Female, age 85, both hemispheres 497.2
2364 Male, age 74, right hemisphere 385.4
2020 Male, age 76, both hemispheres 362.4
2329 Male, age 80, right hemisphere 353.6
2561 Female, age 91, both hemispheres 312.7
Superior vestibular nucleus
nTPM: 194.7
2015 Male, age 80, both hemispheres 268.0
2061 Male, age 76, both hemispheres 213.4
2383 Male, age 74, both hemispheres 102.7
Ventral medullary reticular nucleus
nTPM: 230.2
2060 Male, age 76, both hemispheres 278.3
2372 Male, age 61, both hemispheres 182.2
Ventral periolivary nuclei
nTPM: 433.2
2130 Female, age 85, both hemispheres 584.7
2165 Male, age 80, both hemispheres 499.5
2794 Female, age 91, left hemisphere 352.9
2023 Male, age 76, both hemispheres 295.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 280.1
2741 Female, age 85, both hemispheres 408.8
1986 Male, age 76, both hemispheres 358.0
2180 Male, age 61, both hemispheres 244.2
2302 Female, age 91, both hemispheres 227.6
2118 Male, age 80, both hemispheres 161.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 340.9
2449 Male, age 74, both hemispheres 567.4
1959 Male, age 76, both hemispheres 387.0
2840 Female, age 85, both hemispheres 369.3
2161 Male, age 80, both hemispheres 318.1
2359 Male, age 61, both hemispheres 235.3
2456 Female, age 91, both hemispheres 168.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 327.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 185.0
FF:10182-103D2 60 years, female 242.7
FF:10165-103B3 76 years, female 127.3
Medulla oblongata
Scaled Tags Per Million: 107.0
FF:10038-101F2 18-64 years, mixed 155.9
FF:10174-103C3 60 years, female 84.0
FF:10155-103A2 76 years, female 81.0
Pons
Scaled Tags Per Million: 327.0
FF:10033-101E6 18-54 years, mixed 327.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 737.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 503.8
Samples: 4

Max nTPM: 622.6
Min nTPM: 270.5
Sample A Female 508.0
Sample B Female 622.6
Sample C Male 614.2
Sample D Male 270.5
Pons
nTPM: 737.9
Samples: 4

Max nTPM: 1086.0
Min nTPM: 482.6
Sample A Female 1086.0
Sample B Female 482.6
Sample C Male 586.4
Sample D Male 796.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 477.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 477.8
Samples: 4

Max nTPM: 516.3
Min nTPM: 443.0
Sample A Male 516.3
Sample B Male 463.2
Sample C Female 488.7
Sample D Female 443.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.5
79544840 Antisense, RP_071101_01_A04, Mouse strain C57BL/6J (56 days, male) 16.5
Pons
Expression energy: 15.5
79544840 Antisense, RP_071101_01_A04, Mouse strain C57BL/6J (56 days, male) 15.5

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