We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
RASSF2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • RASSF2
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:63.7 nTPM
HPA Brain:220.5 nTPM
GTEx:63.7 nTPM
FANTOM5:249.5 Scaled Tags Per Million
Pig:35.0 nTPM
Mouse:30.0 nTPM
Allen mouse:3.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051200
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

220.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 54.9
2288 Male, age 75, left hemisphere 79.0
2846 Female, age 79, unknown 72.1
1854 Male, age 80, left hemisphere 58.1
2481 Female, age 94, left hemisphere 54.4
1781 Male, age 74, unknown 50.8
2290 Female, age 72, unknown 49.2
1857 Female, age 85, left hemisphere 40.6
2289 Male, age 61, right hemisphere 34.9
Globus pallidus, externus
nTPM: 214.2
1996 Male, age 80, right hemisphere 261.4
2567 Female, age 72, unknown 253.1
2772 Female, age 79, unknown 209.8
2646 Male, age 61, right hemisphere 189.8
2395 Male, age 75, both hemispheres 157.1
Globus pallidus, internus
nTPM: 220.5
2111 Female, age 85, right hemisphere 312.9
2778 Female, age 91, both hemispheres 246.0
2566 Female, age 72, unknown 231.0
2037 Male, age 80, right hemisphere 214.6
1818 Male, age 74, unknown 196.6
2287 Male, age 75, right hemisphere 187.3
2483 Female, age 94, right hemisphere 154.8
Nucleus accumbens
nTPM: 72.7
2391 Female, age 94, left hemisphere 113.5
2698 Female, age 72, unknown 105.7
2732 Male, age 80, right hemisphere 97.3
2286 Male, age 75, left hemisphere 69.8
1806 Female, age 85, left hemisphere 59.1
1783 Male, age 74, unknown 52.1
2824 Male, age 61, right hemisphere 46.3
1856 Female, age 91, right hemisphere 37.8
Nucleus basalis of Meynert
nTPM: 112.3
2569 Male, age 61, both hemispheres 201.6
2821 Male, age 75, both hemispheres 103.4
2484 Female, age 94, left hemisphere 73.8
2393 Male, age 80, right hemisphere 70.5
Nucleus of the diagonal band
nTPM: 37.4
1812 Female, age 91, both hemispheres 57.4
1979 Male, age 74, unknown 39.5
2029 Male, age 61, right hemisphere 32.0
2775 Male, age 80, right hemisphere 31.5
2195 Female, age 85, both hemispheres 26.6
Putamen
nTPM: 74.1
2647 Male, age 75, left hemisphere 105.3
2489 Female, age 72, unknown 88.5
2482 Female, age 94, left hemisphere 86.6
1829 Male, age 74, unknown 83.0
1937 Female, age 91, right hemisphere 62.7
2466 Female, age 79, unknown 61.2
1838 Male, age 80, right hemisphere 31.5
Septal nuclei
nTPM: 55.3
2394 Male, age 61, left hemisphere 111.1
2199 Male, age 80, right hemisphere 79.1
2059 Female, age 85, both hemispheres 51.2
2629 Female, age 94, right hemisphere 42.9
2009 Female, age 91, both hemispheres 38.1
2031 Female, age 72, unknown 34.6
1960 Male, age 74, unknown 30.1
Stria terminalis, bed nucleus
nTPM: 40.9
2201 Male, age 74, unknown 47.2
1974 Female, age 91, both hemispheres 45.9
2486 Female, age 94, both hemispheres 29.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 41.3
Samples: 246

Max nTPM: 143.4
Min nTPM: 9.7
Std nTPM: 22.2
Median nTPM: 36.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 143.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 120.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 118.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 116.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 111.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 109.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 107.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 103.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 102.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 89.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 86.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 81.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 79.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 79.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 79.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 77.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 76.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 74.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 72.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 71.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 71.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 70.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 68.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 68.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 68.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 67.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 67.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 66.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 65.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 65.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 64.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 64.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 63.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 63.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 63.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 60.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 59.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 58.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 56.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 56.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 56.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 55.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 54.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 54.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 53.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 53.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 53.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 52.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 52.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 51.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 51.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 51.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 51.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 50.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 50.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 50.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 49.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 48.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 48.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 48.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 48.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 48.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 47.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 47.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 46.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 46.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 46.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 45.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 45.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 45.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 45.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 45.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 45.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 45.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 45.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 45.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 44.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 43.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 43.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 43.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 43.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 43.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 42.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 42.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 42.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 42.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 41.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 41.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 40.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 40.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 39.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 39.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 39.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 39.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 39.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 38.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 38.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 38.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 38.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 38.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 37.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 37.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 37.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 37.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 37.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 37.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 37.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 36.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 36.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 36.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 36.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 36.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 35.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 35.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 35.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 35.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 35.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 34.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 34.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 34.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 34.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 34.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 33.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 33.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 33.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 33.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 33.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 32.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 32.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 32.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 32.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 32.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 32.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 32.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 31.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 31.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 30.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 30.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 29.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 29.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 29.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 29.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 29.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 29.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 29.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 28.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 28.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 28.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 28.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 28.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 28.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 27.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 27.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 27.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 27.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 27.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 27.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 27.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 27.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 26.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 26.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 26.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 26.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 26.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 26.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 26.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 26.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 25.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 25.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 25.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 25.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 25.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 24.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 24.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 24.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 24.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 24.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 24.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 23.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 23.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 22.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 22.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 22.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 22.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 22.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 22.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 22.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 22.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 21.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 21.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 21.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 20.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 20.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 20.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 20.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 20.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 19.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 19.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 19.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 19.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 19.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 19.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 19.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 19.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 18.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 18.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 18.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 18.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 18.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 18.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 17.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 17.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 17.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 17.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 17.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 16.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 16.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 15.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 14.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 14.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 13.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 13.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 12.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 11.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 10.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 9.7
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 34.6
Samples: 246

Max nTPM: 241.3
Min nTPM: 2.2
Std nTPM: 29.7
Median nTPM: 26.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 241.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 200.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 185.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 170.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 139.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 117.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 106.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 104.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 93.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 92.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 80.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 77.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 75.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 74.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 74.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 74.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 73.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 71.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 70.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 69.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 68.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 68.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 66.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 66.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 65.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 65.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 63.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 61.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 60.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 58.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 57.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 57.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 55.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 55.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 52.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 51.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 49.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 48.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 48.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 48.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 48.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 48.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 48.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 47.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 47.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 46.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 46.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 45.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 45.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 45.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 44.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 43.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 43.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 43.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 42.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 41.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 41.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 41.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 41.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 41.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 40.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 40.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 40.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 39.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 39.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 39.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 38.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 38.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 38.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 37.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 36.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 36.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 36.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 36.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 36.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 36.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 35.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 35.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 34.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 34.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 34.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 34.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 34.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 33.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 33.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 33.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 32.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 32.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 32.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 31.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 31.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 31.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 30.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 30.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 30.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 30.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 30.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 30.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 29.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 29.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 29.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 29.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 28.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 28.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 28.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 28.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 28.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 28.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 27.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 27.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 27.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 27.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 27.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 27.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 27.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 27.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 27.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 27.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 27.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 26.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 26.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 26.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 26.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 26.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 25.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 25.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 25.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 25.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 25.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 24.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 24.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 24.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 23.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 23.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 23.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 23.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 23.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 23.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 22.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 22.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 22.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 22.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 21.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 21.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 21.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 21.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 21.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 21.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 21.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 21.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 21.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 20.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 20.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 20.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 20.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 20.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 20.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 20.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 19.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 19.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 19.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 19.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 19.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 19.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 19.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 19.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 19.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 19.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 19.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 19.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 19.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 19.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 19.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 19.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 19.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 18.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 18.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 18.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 18.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 18.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 18.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 18.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 18.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 18.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 18.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 18.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 17.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 17.7
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 17.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 17.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 17.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 17.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 17.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 17.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 17.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 17.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 17.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 16.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 16.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 16.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 16.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 15.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 15.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 15.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 15.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 15.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 15.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 15.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 15.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 14.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 14.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 14.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 14.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 13.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 13.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 13.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 13.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 13.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 13.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 12.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 12.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 12.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 12.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 12.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 12.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 12.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 12.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 12.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 11.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 11.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 11.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 10.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 10.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 10.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 10.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 10.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 10.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 10.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 9.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 8.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 8.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 7.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 63.7
Samples: 205

Max nTPM: 247.7
Min nTPM: 18.7
Std nTPM: 33.8
Median nTPM: 60.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 247.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 219.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 218.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 210.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 170.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 144.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 138.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 127.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 119.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 117.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 114.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 114.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 113.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 106.6
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 106.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 104.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 102.4
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 102.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 101.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 100.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 99.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 98.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 94.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 93.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 92.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 89.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 89.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 89.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 86.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 85.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 84.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 82.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 82.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 82.1
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 81.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 81.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 80.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 80.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 80.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 80.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 80.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 80.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 78.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 78.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 78.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 77.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 77.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 76.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 76.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 76.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 76.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 76.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 74.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 74.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 74.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 74.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 73.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 73.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 73.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 72.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 72.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 71.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 71.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 70.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 70.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 70.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 70.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 70.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 68.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 68.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 67.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 67.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 67.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 67.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 66.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 66.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 66.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 66.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 65.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 65.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 64.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 63.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 63.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 63.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 63.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 63.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 63.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 63.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 62.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 62.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 61.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 61.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 60.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 60.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 60.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 60.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 60.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 59.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 59.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 58.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 58.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 58.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 58.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 57.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 57.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 57.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 57.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 57.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 56.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 55.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 53.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 52.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 52.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 52.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 51.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 51.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 51.0
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 51.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 50.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 50.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 49.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 49.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 49.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 49.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 49.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 47.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 47.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 47.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 47.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 46.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 46.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 46.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 46.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 46.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 45.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 45.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 45.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 44.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 44.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 44.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 42.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 41.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 41.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 40.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 40.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 40.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 40.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 40.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 39.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 38.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 38.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 38.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 37.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 37.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 37.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 36.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 36.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 36.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 35.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 35.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 35.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 35.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 34.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 34.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 34.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 34.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 33.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 33.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 32.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 32.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 31.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 31.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 30.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 30.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 30.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 29.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 28.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 28.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 28.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 27.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 24.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 24.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 24.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 23.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 23.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 22.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 22.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 21.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 21.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 20.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 20.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 18.7
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

249.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 38.6
FF:10164-103B2 76 years, female 38.6
Nucleus accumbens
Scaled Tags Per Million: 121.9
FF:10037-101F1 23-56 years, mixed 121.9
Putamen
Scaled Tags Per Million: 71.6
FF:10176-103C5 60 years, female 71.6
Globus pallidus
Scaled Tags Per Million: 249.5
FF:10175-103C4 60 years, female 275.4
FF:10161-103A8 76 years, female 223.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.0
Pig sample Sample description nTPM
Caudate
nTPM: 24.4
Samples: 4

Max nTPM: 26.3
Min nTPM: 23.1
Sample A Female 24.0
Sample B Female 23.1
Sample C Male 26.3
Sample D Male 24.3
Putamen
nTPM: 35.0
Samples: 4

Max nTPM: 51.1
Min nTPM: 25.4
Sample A Female 51.1
Sample B Female 25.4
Sample C Male 35.9
Sample D Male 27.6
Septum
nTPM: 30.6
Samples: 4

Max nTPM: 35.4
Min nTPM: 26.1
Sample A Female 34.0
Sample B Female 27.0
Sample C Male 35.4
Sample D Male 26.1
Ventral pallidum
nTPM: 31.8
Samples: 4

Max nTPM: 42.4
Min nTPM: 26.1
Sample A Female 28.0
Sample B Female 30.6
Sample C Male 42.4
Sample D Male 26.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 25.6
Samples: 4

Max nTPM: 27.7
Min nTPM: 24.4
Sample A Male 24.4
Sample B Male 25.2
Sample C Female 27.7
Sample D Female 25.1
Septum
nTPM: 30.0
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.7
Sample A Male 26.7
Sample B Male 30.8
Sample C Female 30.0
Sample D Female 32.6
Ventral forebrain
nTPM: 21.8
Samples: 4

Max nTPM: 23.1
Min nTPM: 21.0
Sample A Male 23.1
Sample B Male 21.2
Sample C Female 21.0
Sample D Female 22.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.6
68744432 Antisense, RP_050203_02_H07, Mouse strain C57BL/6J (56 days, male) 2.6
Pallidum
Expression energy: 3.0
68744432 Antisense, RP_050203_02_H07, Mouse strain C57BL/6J (56 days, male) 3.0

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org