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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Neuronal projections: Low
Synapses: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:112.4 nTPM
HPA Brain:67.7 nTPM
GTEx:112.4 nTPM
FANTOM5:153.2 Scaled Tags Per Million
Pig:173.9 nTPM
Mouse:152.2 nTPM
Allen mouse:10.1 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA053342
Glial cells Not detected
Neuronal cells Low
Neuronal projections Low
Synapses Medium

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA053342
Glial cells Not detected
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 29.7
2290 Female, age 72, unknown 53.4
1854 Male, age 80, left hemisphere 48.6
1781 Male, age 74, unknown 40.6
1857 Female, age 85, left hemisphere 36.9
2289 Male, age 61, right hemisphere 21.9
2846 Female, age 79, unknown 13.4
2481 Female, age 94, left hemisphere 13.2
2288 Male, age 75, left hemisphere 9.5
Globus pallidus, externus
nTPM: 5.2
2646 Male, age 61, right hemisphere 10.2
2395 Male, age 75, both hemispheres 9.0
2567 Female, age 72, unknown 3.1
2772 Female, age 79, unknown 2.7
1996 Male, age 80, right hemisphere 1.1
Globus pallidus, internus
nTPM: 3.6
2483 Female, age 94, right hemisphere 9.2
2287 Male, age 75, right hemisphere 5.1
2566 Female, age 72, unknown 4.3
2111 Female, age 85, right hemisphere 2.3
2778 Female, age 91, both hemispheres 1.6
2037 Male, age 80, right hemisphere 1.4
1818 Male, age 74, unknown 1.0
Nucleus accumbens
nTPM: 67.7
1783 Male, age 74, unknown 123.9
1856 Female, age 91, right hemisphere 99.7
2698 Female, age 72, unknown 90.2
2824 Male, age 61, right hemisphere 89.4
1806 Female, age 85, left hemisphere 71.8
2732 Male, age 80, right hemisphere 39.6
2286 Male, age 75, left hemisphere 13.9
2391 Female, age 94, left hemisphere 13.1
Nucleus basalis of Meynert
nTPM: 16.5
2484 Female, age 94, left hemisphere 22.2
2821 Male, age 75, both hemispheres 17.7
2393 Male, age 80, right hemisphere 15.0
2569 Male, age 61, both hemispheres 11.0
Nucleus of the diagonal band
nTPM: 21.6
1979 Male, age 74, unknown 29.5
2195 Female, age 85, both hemispheres 24.9
1812 Female, age 91, both hemispheres 20.2
2775 Male, age 80, right hemisphere 16.8
2029 Male, age 61, right hemisphere 16.6
Putamen
nTPM: 16.0
1937 Female, age 91, right hemisphere 33.3
1838 Male, age 80, right hemisphere 33.2
1829 Male, age 74, unknown 19.4
2482 Female, age 94, left hemisphere 10.6
2466 Female, age 79, unknown 7.8
2647 Male, age 75, left hemisphere 5.1
2489 Female, age 72, unknown 2.4
Septal nuclei
nTPM: 18.5
1960 Male, age 74, unknown 31.6
2059 Female, age 85, both hemispheres 29.5
2031 Female, age 72, unknown 22.2
2629 Female, age 94, right hemisphere 20.6
2009 Female, age 91, both hemispheres 12.4
2394 Male, age 61, left hemisphere 11.0
2199 Male, age 80, right hemisphere 2.3
Stria terminalis, bed nucleus
nTPM: 18.6
2486 Female, age 94, both hemispheres 32.2
1974 Female, age 91, both hemispheres 14.2
2201 Male, age 74, unknown 9.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 35.1
Samples: 246

Max nTPM: 200.3
Min nTPM: 0.2
Std nTPM: 34.5
Median nTPM: 24.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 200.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 198.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 155.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 154.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 139.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 137.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 134.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 124.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 119.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 116.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 115.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 113.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 110.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 103.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 97.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 88.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 86.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 86.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 83.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 82.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 81.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 81.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 80.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 78.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 77.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 76.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 74.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 72.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 71.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 68.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 68.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 68.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 67.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 66.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 66.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 64.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 63.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 62.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 62.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 61.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 59.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 57.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 57.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 55.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 55.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 54.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 54.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 52.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 52.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 51.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 50.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 50.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 49.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 48.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 48.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 48.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 46.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 46.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 46.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 44.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 43.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 43.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 43.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 41.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 41.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 41.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 41.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 40.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 39.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 39.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 39.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 38.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 38.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 36.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 35.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 35.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 35.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 35.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 35.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 34.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 34.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 34.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 34.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 34.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 33.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 32.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 32.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 32.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 31.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 31.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 30.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 30.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 29.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 29.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 29.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 28.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 28.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 28.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 27.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 27.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 26.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 26.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 26.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 25.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 25.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 25.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 25.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 25.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 24.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 24.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 24.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 24.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 24.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 23.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 23.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 23.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 23.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 23.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 23.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 22.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 22.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 22.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 22.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 22.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 21.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 21.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 21.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 21.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 20.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 20.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 20.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 20.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 20.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 19.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 19.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 19.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 19.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 19.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 18.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 18.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 17.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 17.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 17.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 16.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 16.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 16.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 16.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 16.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 16.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 16.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 15.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 15.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 15.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 15.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 15.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 14.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 13.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 13.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 13.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 13.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 13.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 12.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 12.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 12.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 12.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 12.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 12.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 11.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 11.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 11.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 11.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 10.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 10.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 10.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 10.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 10.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 10.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 10.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 9.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 9.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 9.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 8.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 8.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 8.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 8.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 8.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 7.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 7.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 7.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 7.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 7.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 6.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 6.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 6.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 6.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 6.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 6.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 5.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 5.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 5.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 5.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 5.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 4.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 4.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 4.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 4.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 3.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 3.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 3.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 3.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 3.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 2.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 2.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 2.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 2.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 2.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 0.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 0.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 0.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 0.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 0.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 0.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 112.4
Samples: 246

Max nTPM: 465.2
Min nTPM: 1.1
Std nTPM: 87.8
Median nTPM: 98.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 465.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 402.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 349.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 341.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 332.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 322.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 322.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 319.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 299.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 297.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 293.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 290.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 289.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 283.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 280.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 279.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 255.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 253.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 250.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 248.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 246.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 242.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 239.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 237.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 233.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 228.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 227.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 226.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 221.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 217.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 216.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 215.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 214.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 214.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 213.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 212.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 208.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 201.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 196.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 196.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 195.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 193.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 192.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 190.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 188.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 188.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 185.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 185.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 184.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 181.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 178.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 177.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 176.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 175.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 174.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 172.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 171.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 170.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 166.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 164.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 162.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 161.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 161.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 161.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 161.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 157.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 152.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 152.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 151.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 150.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 148.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 146.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 146.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 144.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 143.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 142.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 141.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 139.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 138.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 137.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 137.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 136.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 134.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 134.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 133.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 130.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 128.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 128.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 127.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 126.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 126.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 124.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 123.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 123.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 122.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 121.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 120.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 118.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 117.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 114.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 114.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 113.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 113.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 113.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 112.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 112.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 111.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 110.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 110.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 109.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 109.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 108.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 106.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 105.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 104.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 103.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 102.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 102.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 101.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 101.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 99.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 99.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 99.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 98.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 98.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 98.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 97.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 96.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 95.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 95.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 95.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 94.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 94.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 92.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 92.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 92.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 91.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 90.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 89.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 88.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 88.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 88.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 87.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 87.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 87.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 87.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 81.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 81.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 80.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 77.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 77.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 77.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 76.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 75.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 74.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 73.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 72.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 71.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 69.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 68.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 67.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 67.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 65.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 65.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 65.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 62.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 61.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 59.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 55.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 54.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 54.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 53.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 51.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 50.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 50.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 48.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 46.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 46.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 45.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 43.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 41.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 40.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 38.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 37.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 37.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 36.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 32.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 32.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 31.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 30.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 30.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 29.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 29.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 27.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 24.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 24.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 22.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 21.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 21.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 20.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 19.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 19.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 18.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 18.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 17.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 17.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 16.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 15.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 15.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 14.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 14.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 14.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 13.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 12.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 11.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 11.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 10.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 10.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 10.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 8.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 8.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 8.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 7.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 6.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 5.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 5.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 4.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 4.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 3.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 3.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 3.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 3.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 2.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 2.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 2.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 2.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 2.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 2.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 1.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 1.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 1.1
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Brain - Putamen (basal ganglia)
Average nTPM: 19.3
Samples: 205

Max nTPM: 236.7
Min nTPM: 0.0
Std nTPM: 25.7
Median nTPM: 12.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 236.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 123.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 110.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 100.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 87.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 84.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 83.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 79.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 62.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 61.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 61.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 61.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 58.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 55.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 55.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 50.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 50.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 48.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 48.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 46.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 44.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 43.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 41.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 39.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 38.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 36.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 35.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 34.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 34.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 34.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 34.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 33.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 33.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 32.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 32.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 31.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 31.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 30.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 30.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 29.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 28.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 28.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 28.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 28.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 26.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 26.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 26.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 26.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 25.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 25.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 25.1
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 25.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 25.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 23.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 23.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 22.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 22.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 21.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 21.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 21.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 21.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 21.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 21.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 20.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 20.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 20.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 20.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 19.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 19.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 19.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 18.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 18.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 18.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 18.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 17.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 17.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 16.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 16.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 16.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 15.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 15.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 15.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 15.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 15.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 15.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 14.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 14.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 14.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 13.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 13.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 13.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 13.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 13.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 13.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 13.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 13.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 13.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 12.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 12.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 12.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 12.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 12.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 12.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 11.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 11.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 11.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 10.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 10.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 10.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.0
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 9.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 8.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 8.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 7.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 7.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 7.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 6.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 6.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 6.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 6.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 6.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 5.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 5.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 5.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 5.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 5.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 5.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 5.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 4.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 4.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 4.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 4.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 4.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 4.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 4.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 4.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 4.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 4.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 3.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 3.8
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 3.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 3.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 3.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 3.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 3.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 2.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 2.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 2.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 2.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 2.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 2.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 2.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 1.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 1.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 1.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 1.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 1.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 1.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 1.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 1.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 1.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 1.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 1.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 1.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 0.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 0.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 0.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 0.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 0.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 0.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 0.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 0.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 0.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 0.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 0.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 0.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 0.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 0.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 0.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 0.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 0.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 0.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

153.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 95.5
FF:10164-103B2 76 years, female 95.5
Nucleus accumbens
Scaled Tags Per Million: 42.4
FF:10037-101F1 23-56 years, mixed 42.4
Putamen
Scaled Tags Per Million: 153.2
FF:10176-103C5 60 years, female 153.2
Globus pallidus
Scaled Tags Per Million: 6.4
FF:10175-103C4 60 years, female 10.9
FF:10161-103A8 76 years, female 1.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

173.9
Pig sample Sample description nTPM
Caudate
nTPM: 173.9
Samples: 4

Max nTPM: 190.1
Min nTPM: 153.1
Sample A Female 153.1
Sample B Female 190.1
Sample C Male 181.0
Sample D Male 171.4
Putamen
nTPM: 66.1
Samples: 4

Max nTPM: 100.6
Min nTPM: 21.2
Sample A Female 49.9
Sample B Female 92.7
Sample C Male 21.2
Sample D Male 100.6
Septum
nTPM: 129.1
Samples: 4

Max nTPM: 182.1
Min nTPM: 41.8
Sample A Female 182.1
Sample B Female 178.9
Sample C Male 41.8
Sample D Male 113.7
Ventral pallidum
nTPM: 151.9
Samples: 4

Max nTPM: 274.8
Min nTPM: 14.6
Sample A Female 274.8
Sample B Female 140.4
Sample C Male 14.6
Sample D Male 177.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 118.5
Samples: 4

Max nTPM: 127.9
Min nTPM: 106.2
Sample A Male 116.6
Sample B Male 123.3
Sample C Female 106.2
Sample D Female 127.9
Septum
nTPM: 32.6
Samples: 4

Max nTPM: 51.2
Min nTPM: 21.5
Sample A Male 51.2
Sample B Male 24.7
Sample C Female 32.9
Sample D Female 21.5
Ventral forebrain
nTPM: 152.2
Samples: 4

Max nTPM: 194.7
Min nTPM: 123.3
Sample A Male 123.3
Sample B Male 151.4
Sample C Female 194.7
Sample D Female 139.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.1
71717084 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 10.1
69782969 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 9.4
Pallidum
Expression energy: 6.8
69782969 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 6.8
71717084 Antisense, RP_050505_04_B03, Mouse strain C57BL/6J (56 days, male) 2.5

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