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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:19.3 nTPM
GTEx:19.3 nTPM
FANTOM5:52.6 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000226Antibody HPA000250
Squamous epithelial cells Not detectedNot detected



VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

19.3
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 19.3
Samples: 156

Max nTPM: 135.2
Min nTPM: 0.1
Std nTPM: 24.0
Median nTPM: 10.4
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 135.2
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 120.3
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 90.1
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 88.8
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 83.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 82.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 80.9
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 76.3
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 66.6
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 61.4
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 58.5
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 55.9
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 53.6
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 52.4
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 52.3
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 50.7
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 50.6
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 50.1
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 49.2
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 48.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 46.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 45.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 43.1
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 41.4
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 41.0
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 38.7
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 38.0
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 38.0
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 37.9
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 35.1
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 30.5
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 30.3
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 30.1
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 29.7
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 29.5
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 28.7
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 27.3
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 27.3
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 26.8
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 25.1
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 24.5
GTEX-QCQG-1226-SM-48U23 50-59 years, female 24.4
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 24.4
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 24.2
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 24.1
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 24.1
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 23.7
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 22.7
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 21.5
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 20.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 20.0
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 19.9
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 19.4
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 19.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 17.6
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 17.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 17.0
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 17.0
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 16.8
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 16.3
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 15.4
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 14.8
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 14.4
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 13.4
GTEX-16NPV-2526-SM-6M483 50-59 years, female 12.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 12.4
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 12.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 12.1
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 11.4
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 11.3
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 11.3
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 11.3
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 11.1
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 11.1
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 11.0
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 11.0
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 10.8
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 10.7
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 10.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 8.9
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 8.8
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 8.8
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 8.6
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 8.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 8.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 8.3
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 7.9
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 7.9
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 7.8
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 6.3
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 6.1
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 6.1
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 6.0
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 5.8
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 5.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 5.6
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 5.6
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 5.4
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 5.2
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 5.2
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 5.1
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 5.1
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 5.1
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 4.8
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 4.4
GTEX-1C475-0526-SM-793AC 40-49 years, female 4.4
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 4.2
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 4.1
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 4.0
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 3.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 3.6
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 3.6
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 3.6
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 3.5
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 3.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 3.4
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 3.3
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 3.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 3.2
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 3.1
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 2.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 2.7
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 2.7
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 2.7
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 2.2
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 2.1
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 2.1
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2.1
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 2.0
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 2.0
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2.0
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1.5
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 1.3
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 1.2
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1.2
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1.2
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1.0
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 1.0
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 0.8
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 0.8
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 0.7
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 0.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 0.6
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 0.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 0.5
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 0.5
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 0.4
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 0.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 0.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 0.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 0.3
GTEX-14PKU-1326-SM-6871B 40-49 years, female 0.1
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 0.1
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

52.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 52.6
FF:10204-103F6 68 years, female 52.6

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