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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: High
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: High
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Medium
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: High
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: High
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Low
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:43.1 nTPM
HPA Brain:49.0 nTPM
GTEx:43.1 nTPM
FANTOM5:40.0 Scaled Tags Per Million
Pig:29.0 nTPM
Mouse:54.2 nTPM
Allen mouse:0.5 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000913
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus High
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus High
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus High
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Medium
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus High
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Low
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Medium



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.0
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 35.7
2055 Female, age 91, right hemisphere 40.8
2003 Female, age 85, right hemisphere 38.3
1769 Male, age 76, right hemisphere 37.7
1788 Male, age 55, unknown 37.1
2006 Male, age 61, right hemisphere 35.8
1768 Female, age 72, unknown 33.5
1774 Male, age 80, left hemisphere 31.3
2101 Male, age 74, right hemisphere 30.9
Cerebellar nuclei
nTPM: 49.0
2005 Male, age 80, left hemisphere 56.9
2882 Male, age 76, left hemisphere 56.2
2783 Female, age 72, unknown 52.7
1879 Male, age 55, unknown 51.4
1871 Male, age 74, unknown 49.4
1966 Female, age 91, left hemisphere 48.0
2175 Male, age 61, right hemisphere 45.0
2177 Female, age 85, both hemispheres 44.1
2318 Male, age 74, left hemisphere 37.2
Flocculonodular lobe
nTPM: 36.5
2176 Female, age 91, right hemisphere 42.2
1792 Male, age 74, unknown 41.6
1771 Male, age 80, left hemisphere 36.8
2004 Male, age 61, right hemisphere 35.0
1765 Male, age 55, unknown 33.6
1767 Male, age 76, left hemisphere 33.4
1835 Female, age 85, right hemisphere 33.1
Vermis
nTPM: 36.4
1825 Male, age 74, unknown 39.9
2834 Male, age 80, left hemisphere 39.6
1770 Male, age 76, left hemisphere 39.0
1766 Male, age 55, unknown 38.0
2460 Male, age 61, both hemispheres 36.8
1988 Female, age 85, left hemisphere 34.8
1778 Female, age 91, left hemisphere 34.7
1928 Female, age 72, unknown 33.9
1751 Male, age 74, right hemisphere 30.9

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.1
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 42.2
Samples: 215

Max nTPM: 82.4
Min nTPM: 16.7
Std nTPM: 11.1
Median nTPM: 40.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 82.4
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 80.8
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 78.6
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 77.3
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 72.1
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 71.3
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 70.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 70.5
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 65.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 64.1
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 64.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 60.8
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 59.9
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 59.5
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 59.2
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 59.1
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 58.7
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 57.4
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 56.3
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 55.9
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 55.0
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 54.9
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 54.9
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 54.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 54.4
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 53.4
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 53.1
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 53.1
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 52.9
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 52.9
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 52.8
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 52.7
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 52.7
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 52.5
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 51.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 51.2
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 51.0
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 50.3
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 50.1
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 50.0
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 49.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 49.6
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 49.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 49.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 49.3
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 49.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 49.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 48.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 48.8
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 48.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 48.7
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 48.4
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 48.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 47.8
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 47.6
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 47.6
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 47.5
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 47.3
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 47.2
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 47.1
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 47.0
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 47.0
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 46.9
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 46.8
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 46.7
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 46.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 46.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 46.2
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 46.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 45.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 45.4
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 44.8
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 44.3
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 44.1
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 44.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 44.0
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 44.0
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 43.7
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 43.4
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 43.4
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 43.2
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 43.1
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 42.9
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 42.9
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 42.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 42.7
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 42.7
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 42.5
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 42.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 42.2
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 42.1
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 41.9
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 41.6
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 41.4
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 41.3
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 41.3
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 41.1
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 41.0
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 41.0
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 41.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 41.0
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 40.9
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 40.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 40.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 40.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 40.7
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 40.7
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 40.6
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 40.2
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 40.1
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 40.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 40.0
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 39.9
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 39.8
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 39.6
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 39.5
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 39.4
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 39.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 39.4
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 39.4
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 39.3
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 39.3
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 39.1
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 39.1
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 39.0
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 39.0
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 38.8
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 38.6
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 38.6
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 38.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 38.4
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 38.4
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 38.4
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 38.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 38.2
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 38.2
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 38.2
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 38.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 38.1
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 37.7
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 37.5
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 37.4
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 37.4
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 37.3
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 37.1
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 37.0
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 36.8
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 36.7
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 36.6
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 36.6
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 36.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 36.3
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 36.2
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 36.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 36.1
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 36.1
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 36.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 36.0
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 35.8
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 35.7
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 35.6
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 35.5
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 35.4
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 35.1
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 35.0
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 35.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 34.8
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 34.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 34.7
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 34.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 34.4
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 34.2
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 34.2
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 34.0
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 33.9
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 33.8
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 33.8
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 33.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 33.5
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 33.4
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 33.3
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 33.3
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 32.9
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 32.9
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 32.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 32.2
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 32.1
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 32.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 31.8
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 31.7
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 31.5
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 31.4
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 31.3
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 31.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 31.1
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 30.9
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 30.8
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 29.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 28.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 27.9
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 27.7
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 27.7
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 26.6
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 26.1
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 25.1
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 24.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 23.9
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 23.5
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 22.9
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 22.9
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 22.0
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 19.4
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 18.7
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 17.3
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 16.7
Show allShow less
Brain - Cerebellum
Average nTPM: 43.1
Samples: 241

Max nTPM: 79.2
Min nTPM: 17.0
Std nTPM: 8.4
Median nTPM: 42.6
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 79.2
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 67.9
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 65.8
GTEX-14E6D-2926-SM-664OP 50-59 years, male 64.5
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 62.0
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 61.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 61.0
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 60.9
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 57.7
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 57.6
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 57.5
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 56.3
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 55.7
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 55.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 55.4
GTEX-11EI6-2926-SM-5985U 60-69 years, male 55.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 55.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 55.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 54.9
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 54.9
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 54.5
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 54.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 54.3
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 54.0
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 53.6
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 53.5
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 52.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 52.6
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 52.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 52.4
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 52.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 52.3
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 52.1
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 51.4
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 51.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 51.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 50.9
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 50.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 50.7
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 50.6
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 50.1
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 50.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 50.0
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 49.9
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 49.9
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 49.8
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 49.6
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 49.5
GTEX-11DYG-2926-SM-5H132 60-69 years, male 49.4
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 49.2
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 49.2
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 49.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 48.7
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 48.4
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 48.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 48.4
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 48.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 48.3
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 48.1
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 48.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 47.9
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 47.7
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 47.5
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 47.4
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 47.3
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 47.2
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 47.1
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 47.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 47.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 46.8
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 46.7
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 46.5
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 46.3
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 46.3
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 46.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 46.2
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 46.1
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 46.0
GTEX-1192X-3226-SM-5987D 50-59 years, male 45.7
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 45.7
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 45.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 45.4
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 45.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 45.3
GTEX-14ABY-3026-SM-664NE 50-59 years, male 45.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 45.1
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 44.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 44.9
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 44.9
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 44.9
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 44.6
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 44.6
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 44.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 44.5
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 44.4
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 44.3
GTEX-RU72-2926-SM-2TF66 50-59 years, female 44.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 44.1
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 44.0
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 44.0
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 44.0
GTEX-WL46-2826-SM-3LK81 50-59 years, male 44.0
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 43.7
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 43.7
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 43.7
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 43.5
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 43.4
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 43.3
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 43.2
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 43.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 43.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 43.1
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 43.1
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 43.1
GTEX-1B933-3026-SM-731DB 50-59 years, female 42.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 42.9
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 42.8
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 42.7
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 42.7
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 42.6
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 42.6
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 42.3
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 42.3
GTEX-12126-0926-SM-5FQTW 20-29 years, male 42.2
GTEX-11ONC-3026-SM-5985W 60-69 years, male 42.1
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 42.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 42.1
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 42.1
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 42.0
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 42.0
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 41.7
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 41.7
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 41.7
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 41.7
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 41.6
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 41.6
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 41.6
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 41.6
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 41.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 41.6
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 41.6
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 41.6
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 41.4
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 41.4
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 41.4
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 41.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 41.2
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 41.2
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 41.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 41.0
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 41.0
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 41.0
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 41.0
GTEX-11NUK-3026-SM-5986K 50-59 years, male 40.9
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 40.8
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 40.8
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 40.8
GTEX-14PN4-3026-SM-664O4 50-59 years, male 40.6
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 40.4
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 40.4
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 40.3
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 40.3
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 40.1
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 39.9
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 39.9
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 39.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 39.9
GTEX-13112-2926-SM-5DUWT 50-59 years, male 39.8
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 39.6
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 39.5
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 39.5
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 39.4
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 39.3
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 39.3
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 39.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 39.2
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 39.1
GTEX-144GL-2926-SM-5O99F 50-59 years, male 39.0
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 38.9
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 38.9
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 38.8
GTEX-17EVP-2926-SM-793BU 40-49 years, male 38.7
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 38.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 38.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 38.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 38.3
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 38.2
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 38.2
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 38.1
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 38.0
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 37.9
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 37.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 37.6
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 37.5
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 37.5
GTEX-18465-2926-SM-7KFSE 50-59 years, male 37.0
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 36.9
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 36.9
GTEX-145LS-3026-SM-5O99S 60-69 years, female 36.8
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 36.7
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 36.6
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 36.5
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 36.4
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 36.1
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 36.1
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 35.7
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 35.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 35.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 35.5
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 35.4
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 35.1
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 34.8
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 34.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 33.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 33.9
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 32.9
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 32.8
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 32.7
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 32.7
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 31.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 31.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 31.6
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 31.5
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 31.3
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 31.3
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 30.9
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 30.1
GTEX-15G19-2826-SM-6M48K 60-69 years, male 30.0
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 29.8
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 28.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 28.2
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 28.2
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 27.7
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 26.7
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 25.2
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 24.0
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 23.2
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 21.5
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 21.1
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 20.7
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 17.0
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

40.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 40.0
FF:10083-102B2 22-68 years, mixed 44.4
FF:10166-103B4 76 years, female 35.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 29.0
Samples: 4

Max nTPM: 42.2
Min nTPM: 22.1
Sample A Female 42.2
Sample B Female 26.0
Sample C Male 22.1
Sample D Male 25.8

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

54.2
Mouse sample Sample description nTPM
Cerebellum
nTPM: 54.2
Samples: 4

Max nTPM: 55.5
Min nTPM: 53.4
Sample A Male 55.5
Sample B Male 53.4
Sample C Female 54.6
Sample D Female 53.4

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.5
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 0.5
70194982 Antisense, RP_050517_02_B06, Mouse strain C57BL/6J (56 days, male) 0.5

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