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TISSUE RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:248.2 nTPM
GTEx:248.2 nTPM
FANTOM5:5.5 Scaled Tags Per Million

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

248.2
GTEx sample id Sample description nTPM
Retina
Average nTPM: 248.2
Samples: 105

Max nTPM: 609.6
Min nTPM: 11.6
Std nTPM: 117.8
Median nTPM:
319_1 81 years, male 609.6
350_1 84 years, female 567.8
177_1 74 years, male 479.2
318_1 68 years, male 451.2
173_1 67 years, male 448.1
386_1 76 years, male 439.5
349_1 83 years, male 426.1
6_1 73 years, female 418.5
320_1 89 years, female 418.5
292_1 71 years, male 407.6
4_1 88 years, female 406.0
295_1 61 years, female 405.5
99_1 64 years, male 404.9
406_1 79 years, male 400.5
218_1 71 years, female 396.8
352_1 62 years, male 392.7
356_1 87 years, female 388.4
377_1 82 years, female 382.4
163_1 78 years, male 366.5
353_1 82 years, female 359.4
375_1 74 years, female 357.2
404_1 82 years, female 342.6
321_1 62 years, female 330.1
425_1 59 years, female 328.6
335_1 73 years, female 326.3
347_1 72 years, male 326.3
452_1 88 years, female 321.4
376_1 75 years, female 315.1
229_1 69 years, female 296.8
351_1 91 years, male 296.0
354_1 81 years, female 295.2
264_1 73 years, female 290.3
246_1 77 years, male 288.7
251_1 78 years, male 288.2
506_1 65 years, male 287.1
526_1 61 years, male 281.8
286_1 68 years, female 280.4
355_1 70 years, female 275.5
389_1 86 years, female 273.6
109_1 81 years, female 273.5
172_1 72 years, female 273.4
153_1 70 years, female 268.0
447_1 81 years, male 267.9
189_1 76 years, male 267.7
243_1 75 years, male 266.7
237_1 82 years, male 262.1
18_1 88 years, male 261.9
293_1 68 years, female 261.8
517_1 88 years, male 259.3
384_1 83 years, male 254.8
41_1 94 years, female 253.1
145_1 84 years, male 249.6
291_1 76 years, male 246.0
396_1 62 years, male 239.1
254_1 77 years, female 236.2
9_1 66 years, female 231.6
503_1 68 years, male 230.6
468_1 89 years, male 229.1
394_1 75 years, female 229.0
120_1 70 years, female 225.2
405_1 91 years, male 222.6
35_1 74 years, female 221.8
2_1 77 years, female 219.7
137_1 83 years, male 217.9
17_1 71 years, male 217.6
324_1 76 years, male 217.1
139_1 64 years, female 214.6
266_1 85 years, male 207.4
311_1 78 years, male 207.0
265_1 87 years, male 200.5
117_1 61 years, male 200.4
518_1 75 years, female 188.5
317_1 60 years, male 187.1
217_1 76 years, male 176.9
119_1 70 years, female 174.1
313_1 79 years, female 168.0
315_1 62 years, female 166.3
480_1 63 years, male 166.1
316_1 62 years, male 165.0
348_1 84 years, male 164.9
499_1 55 years, female 157.8
314_1 67 years, male 151.3
142_1 61 years, female 147.9
126_1 63 years, male 138.5
81_1 67 years, male 135.5
43_1 64 years, female 135.2
115_1 83 years, male 130.9
288_1 66 years, female 130.8
162_1 79 years, female 130.7
32_1 67 years, male 126.7
42_1 85 years, male 120.1
89_1 63 years, male 112.3
415_1 77 years, female 111.1
307_1 66 years, female 102.8
501_1 88 years, male 99.0
414_1 84 years, female 92.7
149_1 88 years, male 83.7
466_1 57 years, female 82.2
308_1 70 years, female 75.8
495_1 57 years, female 65.1
490_1 67 years, female 63.0
413_1 59 years, female 53.4
491_1 89 years, female 27.4
379_1 60 years, male 19.1
322_1 76 years, male 11.6
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

5.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 5.5
FF:10030-101E3 24-65 years, mixed 5.5

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