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PCSK1N
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  • PCSK1N
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Neuronal projections: High
Synapses: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:747.6 nTPM
HPA Brain:658.6 nTPM
GTEx:747.6 nTPM
FANTOM5:1099.9 Scaled Tags Per Million
Pig:797.5 nTPM
Mouse:47.0 nTPM
Allen mouse:14.7 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA003925
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections High
Synapses Medium

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA064734
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections High
Synapses Medium

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003925Antibody HPA064734
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

658.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 628.9
2290 Female, age 72, unknown 809.6
2288 Male, age 75, left hemisphere 751.7
2289 Male, age 61, right hemisphere 678.1
1857 Female, age 85, left hemisphere 620.2
1854 Male, age 80, left hemisphere 581.2
2846 Female, age 79, unknown 572.0
1781 Male, age 74, unknown 564.3
2481 Female, age 94, left hemisphere 454.0
Globus pallidus, externus
nTPM: 356.2
2567 Female, age 72, unknown 453.7
2772 Female, age 79, unknown 414.7
2646 Male, age 61, right hemisphere 394.1
1996 Male, age 80, right hemisphere 302.1
2395 Male, age 75, both hemispheres 216.4
Globus pallidus, internus
nTPM: 328.8
2566 Female, age 72, unknown 441.5
2483 Female, age 94, right hemisphere 387.4
1818 Male, age 74, unknown 357.3
2287 Male, age 75, right hemisphere 335.8
2037 Male, age 80, right hemisphere 280.6
2111 Female, age 85, right hemisphere 254.4
2778 Female, age 91, both hemispheres 244.8
Nucleus accumbens
nTPM: 645.2
1856 Female, age 91, right hemisphere 873.2
1806 Female, age 85, left hemisphere 737.8
2698 Female, age 72, unknown 727.7
1783 Male, age 74, unknown 719.4
2824 Male, age 61, right hemisphere 710.5
2286 Male, age 75, left hemisphere 599.6
2732 Male, age 80, right hemisphere 545.8
2391 Female, age 94, left hemisphere 247.3
Nucleus basalis of Meynert
nTPM: 534.7
2821 Male, age 75, both hemispheres 632.8
2484 Female, age 94, left hemisphere 564.3
2569 Male, age 61, both hemispheres 490.0
2393 Male, age 80, right hemisphere 451.6
Nucleus of the diagonal band
nTPM: 617.1
1979 Male, age 74, unknown 687.4
2195 Female, age 85, both hemispheres 663.9
2775 Male, age 80, right hemisphere 654.3
1812 Female, age 91, both hemispheres 593.5
2029 Male, age 61, right hemisphere 486.6
Putamen
nTPM: 621.0
2647 Male, age 75, left hemisphere 1020.9
1838 Male, age 80, right hemisphere 686.7
1937 Female, age 91, right hemisphere 642.0
2489 Female, age 72, unknown 607.0
1829 Male, age 74, unknown 474.6
2466 Female, age 79, unknown 460.4
2482 Female, age 94, left hemisphere 455.3
Septal nuclei
nTPM: 507.1
1960 Male, age 74, unknown 735.1
2059 Female, age 85, both hemispheres 516.6
2629 Female, age 94, right hemisphere 509.2
2031 Female, age 72, unknown 507.9
2009 Female, age 91, both hemispheres 473.7
2394 Male, age 61, left hemisphere 454.7
2199 Male, age 80, right hemisphere 352.9
Stria terminalis, bed nucleus
nTPM: 658.6
2201 Male, age 74, unknown 884.0
1974 Female, age 91, both hemispheres 587.0
2486 Female, age 94, both hemispheres 504.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

747.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 539.2
Samples: 246

Max nTPM: 1370.9
Min nTPM: 94.5
Std nTPM: 244.3
Median nTPM: 498.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 1370.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1345.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1335.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 1296.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1265.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1254.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1089.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 1058.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1026.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1021.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 1015.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 999.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 993.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 991.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 975.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 947.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 938.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 936.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 904.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 894.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 890.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 881.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 877.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 854.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 850.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 846.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 845.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 841.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 840.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 836.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 835.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 826.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 814.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 812.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 801.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 800.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 796.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 788.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 782.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 772.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 768.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 768.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 767.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 762.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 744.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 738.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 726.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 725.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 722.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 721.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 718.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 710.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 709.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 708.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 708.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 703.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 693.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 692.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 688.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 687.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 680.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 674.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 672.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 672.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 670.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 663.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 658.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 655.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 654.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 653.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 646.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 645.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 641.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 641.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 638.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 631.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 629.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 619.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 612.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 612.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 609.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 605.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 603.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 600.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 597.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 596.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 594.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 586.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 584.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 579.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 578.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 575.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 569.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 568.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 566.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 564.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 562.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 558.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 556.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 552.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 551.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 550.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 548.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 546.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 546.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 545.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 539.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 538.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 538.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 535.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 533.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 533.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 529.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 517.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 509.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 507.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 505.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 505.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 505.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 504.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 503.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 501.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 499.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 498.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 498.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 496.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 494.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 490.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 490.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 489.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 489.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 489.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 488.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 488.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 483.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 480.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 477.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 477.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 476.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 474.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 471.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 465.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 465.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 465.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 460.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 459.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 458.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 455.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 455.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 453.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 446.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 445.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 444.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 442.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 441.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 432.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 425.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 423.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 419.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 418.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 413.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 412.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 409.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 400.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 396.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 396.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 395.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 394.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 387.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 387.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 383.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 382.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 381.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 381.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 380.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 379.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 379.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 375.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 375.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 374.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 373.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 372.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 371.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 369.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 363.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 363.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 360.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 360.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 358.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 357.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 354.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 350.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 349.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 347.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 347.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 345.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 341.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 340.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 334.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 334.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 333.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 333.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 325.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 317.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 304.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 300.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 299.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 299.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 299.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 287.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 286.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 286.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 284.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 283.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 281.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 276.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 274.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 271.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 267.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 261.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 260.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 255.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 251.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 247.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 245.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 243.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 238.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 236.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 234.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 233.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 225.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 225.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 224.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 215.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 210.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 203.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 200.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 194.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 182.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 158.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 155.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 155.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 134.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 126.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 111.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 94.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 747.6
Samples: 246

Max nTPM: 2294.9
Min nTPM: 78.6
Std nTPM: 357.4
Median nTPM: 718.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 2294.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 1728.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 1726.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 1638.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 1630.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 1572.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1561.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1538.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1515.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 1484.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1481.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1457.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 1370.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 1353.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 1352.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 1346.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 1324.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 1309.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 1281.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 1263.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1254.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 1246.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 1229.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 1224.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1219.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 1205.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 1203.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 1202.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 1202.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1189.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1181.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 1181.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 1146.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 1126.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 1124.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1121.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 1109.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 1105.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 1103.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 1096.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 1089.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 1089.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 1087.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1075.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 1058.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 1054.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 1053.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 1052.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 1035.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 1035.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 1031.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1029.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1019.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 1019.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 1007.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 1007.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 1007.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1003.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1001.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 995.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 989.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 981.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 980.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 975.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 959.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 952.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 948.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 923.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 918.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 916.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 908.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 901.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 895.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 894.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 885.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 877.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 874.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 869.0
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 868.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 868.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 860.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 853.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 852.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 845.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 828.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 828.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 819.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 816.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 815.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 812.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 810.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 807.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 806.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 800.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 793.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 791.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 790.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 788.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 777.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 775.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 774.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 771.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 768.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 766.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 761.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 760.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 759.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 758.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 756.5
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 751.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 750.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 748.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 745.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 740.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 739.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 738.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 735.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 731.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 730.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 730.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 726.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 721.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 720.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 717.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 714.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 706.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 703.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 700.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 694.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 689.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 689.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 681.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 677.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 675.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 666.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 661.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 655.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 637.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 635.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 633.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 625.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 625.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 620.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 614.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 614.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 612.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 609.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 607.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 604.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 603.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 603.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 600.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 591.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 590.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 589.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 582.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 580.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 577.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 576.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 573.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 572.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 571.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 570.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 568.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 562.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 562.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 558.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 556.5
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 549.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 542.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 536.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 528.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 525.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 523.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 523.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 522.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 520.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 517.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 515.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 515.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 510.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 502.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 496.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 490.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 482.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 477.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 476.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 474.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 472.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 463.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 462.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 462.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 457.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 453.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 452.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 449.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 448.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 447.3
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 444.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 439.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 435.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 435.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 433.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 431.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 429.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 429.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 425.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 410.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 389.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 385.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 385.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 384.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 381.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 375.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 369.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 362.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 361.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 347.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 341.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 338.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 335.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 334.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 328.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 323.7
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 315.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 307.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 306.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 306.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 270.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 270.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 251.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 249.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 248.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 244.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 237.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 228.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 228.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 215.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 214.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 149.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 148.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 123.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 105.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 93.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 84.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 78.6
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Brain - Putamen (basal ganglia)
Average nTPM: 559.2
Samples: 205

Max nTPM: 1699.7
Min nTPM: 98.0
Std nTPM: 239.4
Median nTPM: 542.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 1699.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 1247.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 1220.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1150.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 1096.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 1077.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 1053.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1048.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 988.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 983.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 975.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 969.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 968.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 964.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 952.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 928.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 902.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 901.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 895.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 890.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 873.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 861.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 859.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 855.0
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 842.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 838.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 832.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 830.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 825.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 821.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 803.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 799.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 794.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 786.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 777.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 754.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 742.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 739.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 737.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 733.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 725.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 713.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 709.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 706.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 701.7
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 699.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 698.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 696.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 693.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 688.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 679.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 676.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 673.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 671.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 670.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 670.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 663.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 659.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 659.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 657.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 652.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 651.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 648.2
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 648.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 647.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 632.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 632.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 630.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 629.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 626.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 623.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 622.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 618.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 617.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 616.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 615.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 613.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 608.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 604.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 604.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 603.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 599.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 598.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 595.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 591.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 586.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 582.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 578.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 574.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 570.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 567.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 563.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 559.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 557.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 556.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 556.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 554.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 554.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 551.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 548.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 546.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 545.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 542.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 539.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 533.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 530.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 529.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 529.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 528.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 527.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 527.4
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 523.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 521.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 512.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 511.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 509.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 501.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 496.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 494.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 494.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 488.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 483.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 482.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 481.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 476.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 475.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 470.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 463.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 460.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 459.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 453.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 451.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 450.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 449.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 447.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 447.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 443.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 439.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 439.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 431.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 426.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 423.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 423.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 415.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 415.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 414.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 411.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 410.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 409.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 407.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 400.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 396.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 393.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 388.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 385.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 384.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 383.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 378.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 376.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 371.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 366.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 366.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 362.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 360.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 357.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 356.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 351.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 347.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 346.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 340.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 331.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 327.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 326.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 325.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 320.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 318.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 317.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 313.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 302.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 294.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 288.0
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 280.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 277.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 275.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 272.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 260.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 258.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 257.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 255.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 251.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 249.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 248.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 231.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 226.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 219.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 215.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 206.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 187.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 183.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 175.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 172.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 163.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 151.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 106.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 98.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1099.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 693.4
FF:10164-103B2 76 years, female 693.4
Nucleus accumbens
Scaled Tags Per Million: 886.1
FF:10037-101F1 23-56 years, mixed 886.1
Putamen
Scaled Tags Per Million: 1099.9
FF:10176-103C5 60 years, female 1099.9
Globus pallidus
Scaled Tags Per Million: 224.7
FF:10175-103C4 60 years, female 265.2
FF:10161-103A8 76 years, female 184.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

797.5
Pig sample Sample description nTPM
Caudate
nTPM: 797.5
Samples: 4

Max nTPM: 985.7
Min nTPM: 595.9
Sample A Female 595.9
Sample B Female 985.7
Sample C Male 963.1
Sample D Male 645.1
Putamen
nTPM: 747.2
Samples: 4

Max nTPM: 930.9
Min nTPM: 571.7
Sample A Female 571.7
Sample B Female 726.8
Sample C Male 930.9
Sample D Male 759.4
Septum
nTPM: 759.1
Samples: 4

Max nTPM: 915.2
Min nTPM: 457.7
Sample A Female 880.0
Sample B Female 783.6
Sample C Male 915.2
Sample D Male 457.7
Ventral pallidum
nTPM: 724.4
Samples: 4

Max nTPM: 801.9
Min nTPM: 635.8
Sample A Female 765.1
Sample B Female 694.9
Sample C Male 801.9
Sample D Male 635.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

47.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 24.7
Samples: 4

Max nTPM: 53.9
Min nTPM: 8.9
Sample A Male 24.2
Sample B Male 53.9
Sample C Female 8.9
Sample D Female 11.9
Septum
nTPM: 47.0
Samples: 4

Max nTPM: 57.5
Min nTPM: 30.4
Sample A Male 57.5
Sample B Male 45.8
Sample C Female 54.4
Sample D Female 30.4
Ventral forebrain
nTPM: 33.0
Samples: 4

Max nTPM: 53.4
Min nTPM: 15.5
Sample A Male 41.4
Sample B Male 21.8
Sample C Female 53.4
Sample D Female 15.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.0
79360249 Antisense, RP_071018_01_E06, Mouse strain C57BL/6J (56 days, male) 18.7
777 Antisense, RP_040315_01_19, Mouse strain C57BL/6J (56 days, male) 5.3
778 Antisense, RP_040315_01_19, Mouse strain C57BL/6J (56 days, male) 1.9
Pallidum
Expression energy: 14.7
79360249 Antisense, RP_071018_01_E06, Mouse strain C57BL/6J (56 days, male) 19.4
777 Antisense, RP_040315_01_19, Mouse strain C57BL/6J (56 days, male) 10.0
778 Antisense, RP_040315_01_19, Mouse strain C57BL/6J (56 days, male) 4.4

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