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MAGT1
HPA
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  • MAGT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

MAGT1
Synonyms DKFZp564K142, IAP, MRX95, OST3B, SLC58A1
Gene descriptioni

Full gene name according to HGNC.

Magnesium transporter 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Potential drug targets
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband q21.1
Chromosome location (bp) 77825747 - 77899271
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000102158 (version 109)
Entrez gene 84061
HGNC HGNC:28880
UniProt Q9H0U3 (UniProt - Evidence at protein level)
neXtProt NX_Q9H0U3
GeneCards MAGT1
Antibodypedia MAGT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Accessory component of the STT3B-containing form of the N-oligosaccharyl transferase (OST) complex which catalyzes the transfer of a high mannose oligosaccharide from a lipid-linked oligosaccharide donor to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains 1. Involved in N-glycosylation of STT3B-dependent substrates 2. Specifically required for the glycosylation of a subset of acceptor sites that are near cysteine residues; in this function seems to act redundantly with TUSC3. In its oxidized form proposed to form transient mixed disulfides with a glycoprotein substrate to facilitate access of STT3B to the unmodified acceptor site. Has also oxidoreductase-independent functions in the STT3B-containing OST complex possibly involving substrate recognition.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Magnesium
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a ubiquitously expressed magnesium cation transporter protein that localizes to the cell membrane. This protein also associates with N-oligosaccharyl transferase and therefore may have a role in N-glycosylation. Mutations in this gene cause a form of X-linked intellectual disability (XLID). This gene may have multiple in-frame translation initiation sites, one of which would encode a shorter protein with an N-terminus containing a signal peptide at amino acids 1-29. [provided by RefSeq, Jul 2017]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
MAGT1-201
ENSP00000354649
ENST00000358075
Q9H0U3
[Direct mapping] Magnesium transporter protein 1
Show all
A0A087WU53
[Direct mapping] Magnesium transporter protein 1
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0015693 [magnesium ion transport]
GO:0016020 [membrane]
GO:0018279 [protein N-linked glycosylation via asparagine]
GO:0035577 [azurophil granule membrane]
GO:0050890 [cognition]
GO:0055085 [transmembrane transport]
GO:1903830 [magnesium ion transmembrane transport]
Show all
335 aa
38 kDa
Yes 4
MAGT1-202
ENSP00000362433
ENST00000373336
Q9H0U3
[Direct mapping] Magnesium transporter protein 1
Show all
Transporters
   Transporter channels and pores
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   Secreted proteins predicted by MDSEC
   SignalP predicted secreted proteins
   Phobius predicted secreted proteins
   SPOCTOPUS predicted secreted proteins
   DeepTMHMM predicted secreted proteins
   DeepSig predicted secreted proteins
Predicted intracellular proteins
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0015693 [magnesium ion transport]
GO:0016020 [membrane]
GO:0018279 [protein N-linked glycosylation via asparagine]
GO:0035577 [azurophil granule membrane]
GO:0050890 [cognition]
GO:0055085 [transmembrane transport]
GO:1903830 [magnesium ion transmembrane transport]
Show all
134 aa
15.7 kDa
Yes 0
MAGT1-204
ENSP00000480732
ENST00000618282
Q9H0U3
[Direct mapping] Magnesium transporter protein 1
Show all
Transporters
   Transporter channels and pores
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   4TM proteins predicted by MDM
Disease related genes
Potential drug targets
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0015693 [magnesium ion transport]
GO:0016020 [membrane]
GO:0018279 [protein N-linked glycosylation via asparagine]
GO:0035577 [azurophil granule membrane]
GO:0050890 [cognition]
GO:0055085 [transmembrane transport]
GO:1903830 [magnesium ion transmembrane transport]
Show all
335 aa
38 kDa
Yes 4
MAGT1-206
ENSP00000509969
ENST00000685015
A0A8I5QKX7
[Direct mapping] Magnesium transporter protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0016020 [membrane]
Show all
312 aa
35.4 kDa
Yes 3
MAGT1-207
ENSP00000510266
ENST00000685353
A0A8I5KUC4
[Direct mapping] Magnesium transporter protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0016020 [membrane]
Show all
272 aa
30.9 kDa
Yes 2
MAGT1-208
ENSP00000509785
ENST00000688650
A0A8I5KYH1
[Direct mapping] Magnesium transporter protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0016020 [membrane]
Show all
305 aa
34.7 kDa
Yes 3
MAGT1-210
ENSP00000509887
ENST00000689519
A0A8I5QJM4
[Direct mapping] Magnesium transporter protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0016020 [membrane]
Show all
302 aa
34.2 kDa
Yes 3
MAGT1-213
ENSP00000509676
ENST00000692161
A0A8I5QJJ8
[Direct mapping] Magnesium transporter protein 1
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Human disease related genes
   Congenital disorders of metabolism
   Congenital disorders of glycan/glycoprotein metabolism
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0006486 [protein glycosylation]
GO:0006487 [protein N-linked glycosylation]
GO:0008250 [oligosaccharyltransferase complex]
GO:0015095 [magnesium ion transmembrane transporter activity]
GO:0016020 [membrane]
Show all
241 aa
27.5 kDa
Yes 2

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