HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:65.6 nTPM
HPA Brain:155.5 nTPM
GTEx:65.6 nTPM
FANTOM5:157.6 Scaled Tags Per Million
Pig:46.4 nTPM
Mouse:55.0 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038782Antibody HPA038783
Glial cells LowNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 155.5
Sample id Sample description nTPM
Hippocampus
nTPM: 129.3
1898 Male, age 80, left hemisphere 175.2
2148 Female, age 91, left hemisphere 135.2
1855 Male, age 76, left hemisphere 130.0
2621 Female, age 67, right hemisphere 126.8
2529 Female, age 94, left hemisphere 115.3
1911 Female, age 85, right hemisphere 93.0
Dentate gyrus
nTPM: 132.4
1927 Female, age 91, both hemispheres 154.5
2530 Female, age 94, left hemisphere 142.7
2528 Male, age 74, both hemispheres 136.3
2010 Male, age 76, both hemispheres 123.8
2531 Female, age 67, both hemispheres 119.2
2246 Female, age 85, both hemispheres 117.8
Entorhinal gyrus
nTPM: 140.8
2764 Male, age 80, right hemisphere 168.6
2613 Female, age 94, left hemisphere 152.1
1787 Male, age 76, left hemisphere 136.5
1938 Female, age 85, left hemisphere 134.8
2686 Male, age 75, right hemisphere 127.0
2117 Female, age 91, right hemisphere 125.6
Hippocampus, CA1
nTPM: 128.9
2749 Male, age 80, left hemisphere 165.5
1873 Female, age 85, both hemispheres 135.7
2527 Male, age 74, both hemispheres 123.4
2045 Male, age 76, both hemispheres 118.3
2082 Female, age 91, right hemisphere 101.3
Hippocampus, CA2
nTPM: 134.2
1963 Male, age 80, left hemisphere 176.2
1892 Male, age 76, both hemispheres 171.5
2437 Female, age 94, left hemisphere 141.4
2249 Male, age 74, both hemispheres 108.0
1940 Female, age 85, left hemisphere 106.8
2113 Female, age 91, right hemisphere 101.1
Hippocampus, CA3
nTPM: 126.2
2620 Female, age 94, left hemisphere 156.8
2861 Female, age 67, both hemispheres 132.6
1867 Male, age 76, both hemispheres 131.2
1891 Female, age 85, both hemispheres 118.6
2137 Male, age 80, left hemisphere 111.4
2436 Male, age 74, both hemispheres 106.8
Parahippocampal cortex
nTPM: 130.9
1990 Female, age 91, right hemisphere 156.6
1850 Male, age 80, both hemispheres 155.7
2693 Female, age 94, both hemispheres 135.6
2532 Female, age 72, left hemisphere 135.0
2245 Female, age 91, both hemispheres 131.2
2692 Male, age 74, both hemispheres 130.8
1933 Female, age 85, both hemispheres 127.2
2250 Female, age 67, right hemisphere 120.4
2622 Female, age 67, right hemisphere 120.2
2018 Male, age 76, both hemispheres 96.1
Perirhinal gyrus
nTPM: 155.5
1847 Female, age 91, left hemisphere 180.9
1794 Male, age 80, right hemisphere 173.2
2521 Female, age 94, right hemisphere 154.9
1841 Female, age 85, right hemisphere 140.7
2848 Male, age 76, right hemisphere 127.7
Subiculum
nTPM: 124.7
1977 Female, age 85, both hemispheres 142.6
2438 Female, age 94, left hemisphere 137.2
2619 Male, age 74, both hemispheres 134.3
1901 Male, age 80, both hemispheres 128.5
2729 Female, age 91, right hemisphere 121.1
2042 Male, age 76, both hemispheres 84.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 65.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 65.6
Samples: 197

Max nTPM: 140.2
Min nTPM: 17.2
Std nTPM: 19.9
Median nTPM: 60.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 140.2
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 124.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 121.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 121.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 115.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 115.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 113.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 111.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 111.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 111.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 106.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 157.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 157.6
FF:10169-103B7 60 years, female 200.4
FF:10153-102I9 76 years, female 114.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 46.4
Pig sample Sample description nTPM
Subiculum
nTPM: 38.0
Samples: 4

Max nTPM: 48.4
Min nTPM: 29.5
Sample A Female 48.4
Sample B Female 34.8
Sample C Male 39.2
Sample D Male 29.5
Dorsal hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 47.2
Min nTPM: 26.9
Sample A Female 47.2
Sample B Female 44.7
Sample C Male 36.9
Sample D Male 26.9
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 56.4
Min nTPM: 38.5
Sample A Female 44.7
Sample B Female 46.0
Sample C Male 56.4
Sample D Male 38.5
Ventral hippocampus
nTPM: 40.6
Samples: 4

Max nTPM: 55.2
Min nTPM: 30.3
Sample A Female 38.1
Sample B Female 30.3
Sample C Male 55.2
Sample D Male 38.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 55.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.0
Samples: 4

Max nTPM: 61.8
Min nTPM: 51.0
Sample A Male 51.0
Sample B Male 53.0
Sample C Female 54.1
Sample D Female 61.8
Hippocampal formation
nTPM: 45.8
Samples: 4

Max nTPM: 47.9
Min nTPM: 43.3
Sample A Male 47.9
Sample B Male 43.3
Sample C Female 46.7
Sample D Female 45.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
68637898 Antisense, RP_050126_01_H02, Mouse strain C57BL/6J (56 days, male) 3.4

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