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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:57.2 nTPM
HPA Brain:50.2 nTPM
GTEx:57.2 nTPM
FANTOM5:67.8 Scaled Tags Per Million
Pig:30.7 nTPM
Mouse:49.8 nTPM
Allen mouse:2.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000504
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 41.1
2481 Female, age 94, left hemisphere 52.4
2846 Female, age 79, unknown 42.6
2288 Male, age 75, left hemisphere 42.2
1857 Female, age 85, left hemisphere 41.2
2290 Female, age 72, unknown 40.5
2289 Male, age 61, right hemisphere 38.5
1854 Male, age 80, left hemisphere 36.8
1781 Male, age 74, unknown 35.0
Globus pallidus, externus
nTPM: 50.2
2646 Male, age 61, right hemisphere 54.6
1996 Male, age 80, right hemisphere 50.6
2395 Male, age 75, both hemispheres 50.1
2772 Female, age 79, unknown 49.9
2567 Female, age 72, unknown 45.7
Globus pallidus, internus
nTPM: 49.3
2483 Female, age 94, right hemisphere 62.4
2287 Male, age 75, right hemisphere 61.6
2037 Male, age 80, right hemisphere 48.7
1818 Male, age 74, unknown 46.6
2566 Female, age 72, unknown 43.3
2778 Female, age 91, both hemispheres 41.9
2111 Female, age 85, right hemisphere 40.8
Nucleus accumbens
nTPM: 43.9
2698 Female, age 72, unknown 54.0
2391 Female, age 94, left hemisphere 49.4
1856 Female, age 91, right hemisphere 45.2
1806 Female, age 85, left hemisphere 44.5
2286 Male, age 75, left hemisphere 42.7
1783 Male, age 74, unknown 39.5
2732 Male, age 80, right hemisphere 38.9
2824 Male, age 61, right hemisphere 36.5
Nucleus basalis of Meynert
nTPM: 47.0
2569 Male, age 61, both hemispheres 54.4
2821 Male, age 75, both hemispheres 46.8
2484 Female, age 94, left hemisphere 44.6
2393 Male, age 80, right hemisphere 42.3
Nucleus of the diagonal band
nTPM: 43.1
1812 Female, age 91, both hemispheres 49.2
2195 Female, age 85, both hemispheres 45.3
2775 Male, age 80, right hemisphere 44.9
1979 Male, age 74, unknown 42.9
2029 Male, age 61, right hemisphere 33.1
Putamen
nTPM: 41.8
2482 Female, age 94, left hemisphere 51.4
2647 Male, age 75, left hemisphere 48.0
1838 Male, age 80, right hemisphere 42.1
1829 Male, age 74, unknown 41.2
1937 Female, age 91, right hemisphere 39.8
2489 Female, age 72, unknown 35.4
2466 Female, age 79, unknown 35.2
Septal nuclei
nTPM: 41.5
2199 Male, age 80, right hemisphere 46.8
2629 Female, age 94, right hemisphere 45.3
2009 Female, age 91, both hemispheres 43.6
1960 Male, age 74, unknown 39.8
2031 Female, age 72, unknown 39.0
2059 Female, age 85, both hemispheres 38.3
2394 Male, age 61, left hemisphere 37.4
Stria terminalis, bed nucleus
nTPM: 44.3
2201 Male, age 74, unknown 57.3
1974 Female, age 91, both hemispheres 41.3
2486 Female, age 94, both hemispheres 34.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.9
Samples: 246

Max nTPM: 95.8
Min nTPM: 35.5
Std nTPM: 8.4
Median nTPM: 50.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 95.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 83.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 80.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 77.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 74.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 73.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 72.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 71.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 69.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 68.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 66.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 66.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 65.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 65.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 64.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 63.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 63.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 62.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 62.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 61.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 61.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 61.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 61.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 61.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 61.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 61.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 61.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 60.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 60.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 60.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 59.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 59.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 59.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 59.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 58.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 58.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 58.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 58.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 58.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 58.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 58.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 57.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 57.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 57.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 57.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 56.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 56.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 56.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 56.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 56.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 56.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 56.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 55.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 55.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 55.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 55.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 55.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 55.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 55.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 55.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 55.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 54.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 54.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 54.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 54.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 54.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 54.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 53.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 53.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 53.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 53.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 53.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 53.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 53.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 53.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 52.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 52.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 52.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 52.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 52.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 52.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 52.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 52.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 52.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 51.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 51.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 51.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 51.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 51.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 51.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 51.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 51.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 51.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 51.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 51.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 51.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 51.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 50.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 50.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 50.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 50.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 50.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 50.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 50.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 50.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 50.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 50.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 50.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 50.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 49.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 49.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 49.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 49.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 49.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 49.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 49.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 49.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 49.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 49.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 48.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 48.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 48.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 48.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 48.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 48.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 48.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 48.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 48.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 48.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 48.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 48.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 48.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 48.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 48.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 48.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 48.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 48.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 48.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 48.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 47.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 47.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 47.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 47.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 47.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 47.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 47.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 47.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 47.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 47.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 47.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 47.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 47.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 47.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 46.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 46.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 46.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 46.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 46.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 46.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 46.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 46.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 46.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 46.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 46.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 46.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 46.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 45.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 45.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 45.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 45.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 45.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 45.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 45.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 45.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 45.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 45.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 45.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 45.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 45.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 45.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 44.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 44.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 44.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 43.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 43.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 43.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 43.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 42.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 42.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 42.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 42.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 42.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 42.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 42.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 42.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 42.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 42.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 41.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 41.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 41.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 41.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 41.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 40.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 40.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 40.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 40.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 39.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 38.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 38.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 37.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 35.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 56.2
Samples: 246

Max nTPM: 107.4
Min nTPM: 30.9
Std nTPM: 9.6
Median nTPM: 56.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 107.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 85.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 84.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 82.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 82.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 80.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 77.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 75.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 74.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 73.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 73.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 71.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 69.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 69.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 68.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 68.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 68.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 68.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 68.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 67.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 67.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 67.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 67.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 67.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 67.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 66.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 66.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 65.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 65.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 65.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 65.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 64.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 64.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 64.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 64.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 64.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 63.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 63.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 63.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 63.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 62.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 62.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 62.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 62.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 62.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 62.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 62.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 61.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 61.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 61.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 61.4
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 61.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 61.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 61.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 61.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 61.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 61.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 61.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 60.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 60.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 60.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 60.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 60.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 60.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 60.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 60.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 60.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 60.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 60.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 60.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 59.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 59.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 59.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 59.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 59.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 59.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 59.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 59.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 59.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 59.2
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 59.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 58.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 58.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 58.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 58.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 58.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 58.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 57.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 57.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 57.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 57.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 57.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 57.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 57.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 57.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 57.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 57.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 57.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 57.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 57.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 57.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 56.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 56.9
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 56.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 56.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 56.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 56.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 56.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 56.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 56.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 56.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 56.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 56.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 56.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 55.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 55.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 55.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 55.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 55.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 55.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 55.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 55.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 55.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 55.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 55.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 55.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 55.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 54.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 54.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 54.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 54.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 54.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 54.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 54.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 54.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 54.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 54.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 54.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 53.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 53.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 53.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 53.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 53.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 53.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 53.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 53.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 53.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 53.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 52.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 52.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 52.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 51.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 51.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 51.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 51.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 51.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 51.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 51.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 51.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 51.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 51.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 51.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 51.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 51.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 51.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 50.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 50.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 50.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 50.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 50.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 50.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 50.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 50.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 49.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 49.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 49.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 49.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 49.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 48.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 48.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 48.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 48.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 48.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 48.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 47.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 47.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 47.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 47.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 47.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 47.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 47.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 47.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 47.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 46.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 46.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 46.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 46.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 46.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 45.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 45.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 44.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 44.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 44.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 44.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 44.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 44.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 43.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 43.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 43.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 42.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 42.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 42.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 42.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 40.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 39.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 39.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 38.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 38.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 38.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 36.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 35.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 34.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 30.9
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Brain - Putamen (basal ganglia)
Average nTPM: 57.2
Samples: 205

Max nTPM: 95.1
Min nTPM: 37.6
Std nTPM: 10.2
Median nTPM: 55.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 95.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 93.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 91.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 87.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 86.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 82.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 79.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 78.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 78.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 77.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 76.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 76.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 76.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 74.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 74.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 73.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 73.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 73.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 72.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 71.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 71.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 71.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 70.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 70.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 70.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 69.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 69.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 69.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 68.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 68.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 68.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 67.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 67.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 66.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 66.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 66.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 66.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 65.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 65.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 64.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 64.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 63.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 63.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 62.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 62.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 62.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 62.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 62.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 62.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 62.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 61.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 61.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 61.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 61.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 61.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 61.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 60.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 60.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 60.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 60.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 60.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 60.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 60.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 59.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 59.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 59.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 59.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 59.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 59.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 58.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 58.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 58.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 58.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 58.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 58.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 57.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 57.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 57.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 57.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 57.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 57.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 57.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 57.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 57.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 57.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 56.9
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 56.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 56.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 56.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 56.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 56.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 55.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 55.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 55.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 55.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 55.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 55.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 55.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 55.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 55.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 54.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 54.6
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 54.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 54.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 54.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 54.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 54.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 53.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 53.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 53.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 53.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 53.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 53.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 53.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 52.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 52.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 52.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 52.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 52.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 52.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 52.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 52.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 52.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 52.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 52.2
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 52.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 52.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 52.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 52.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 51.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 51.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 51.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 51.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 51.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 51.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 51.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 50.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 50.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 50.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 49.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 49.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 49.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 49.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 49.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 49.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 49.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 49.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.1
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 49.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 49.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 48.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 48.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 48.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 48.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 48.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 48.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 48.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 48.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 48.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 48.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 47.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 47.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 47.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 47.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 47.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 47.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 47.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 47.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 46.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 46.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 46.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 45.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 45.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 45.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 45.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 45.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 44.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 44.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 44.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 44.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 43.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 42.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 42.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 42.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 42.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 42.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 37.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

67.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 45.3
FF:10164-103B2 76 years, female 45.3
Nucleus accumbens
Scaled Tags Per Million: 54.0
FF:10037-101F1 23-56 years, mixed 54.0
Putamen
Scaled Tags Per Million: 57.8
FF:10176-103C5 60 years, female 57.8
Globus pallidus
Scaled Tags Per Million: 67.8
FF:10175-103C4 60 years, female 76.1
FF:10161-103A8 76 years, female 59.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

30.7
Pig sample Sample description nTPM
Caudate
nTPM: 23.8
Samples: 4

Max nTPM: 26.1
Min nTPM: 21.8
Sample A Female 23.8
Sample B Female 23.3
Sample C Male 26.1
Sample D Male 21.8
Putamen
nTPM: 30.7
Samples: 4

Max nTPM: 36.4
Min nTPM: 24.0
Sample A Female 36.4
Sample B Female 24.0
Sample C Male 32.0
Sample D Male 30.5
Septum
nTPM: 30.4
Samples: 4

Max nTPM: 34.9
Min nTPM: 25.8
Sample A Female 33.1
Sample B Female 25.8
Sample C Male 34.9
Sample D Male 27.6
Ventral pallidum
nTPM: 30.0
Samples: 4

Max nTPM: 32.4
Min nTPM: 27.3
Sample A Female 27.3
Sample B Female 29.0
Sample C Male 32.4
Sample D Male 31.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 49.8
Samples: 4

Max nTPM: 52.4
Min nTPM: 47.7
Sample A Male 50.8
Sample B Male 48.1
Sample C Female 52.4
Sample D Female 47.7
Septum
nTPM: 42.7
Samples: 4

Max nTPM: 45.0
Min nTPM: 39.6
Sample A Male 42.8
Sample B Male 45.0
Sample C Female 39.6
Sample D Female 43.4
Ventral forebrain
nTPM: 46.8
Samples: 4

Max nTPM: 50.5
Min nTPM: 42.1
Sample A Male 50.5
Sample B Male 46.5
Sample C Female 42.1
Sample D Female 48.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.1
69059923 Antisense, RP_050317_04_E04, Mouse strain C57BL/6J (56 days, male) 2.1
Pallidum
Expression energy: 1.7
69059923 Antisense, RP_050317_04_E04, Mouse strain C57BL/6J (56 days, male) 1.7

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