Expression of TIMP1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TIMP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 197.5

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

587.5

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	6820.5
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	3891.9
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	3579.8
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	3436.5
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	3273.9
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	2936.3
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	2487.7
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	2178.9
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	2174.7
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	2152.4
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	2107.8
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	2074.0
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	2036.4
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	2015.3
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	2007.3
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	1880.9
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	1876.2
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	1849.0
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	1796.9
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	1765.5
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	1745.3
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	1731.7
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	1704.0
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	1686.0
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	1667.3
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	1654.1
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	1646.8
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	1631.4
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	1611.0
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	1578.8
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	1538.1
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	1495.6
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	1485.5
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	1462.4
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	1445.5
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	1434.1
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	1408.3
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	1383.0
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	1361.3
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	1335.9
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	1324.8
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	1310.3
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	1270.3
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	1250.8
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	1247.4
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	1230.1
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	1214.3
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	1210.3
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	1205.8
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	1196.3
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	1189.5
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	1183.4
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	1173.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	1160.4
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	1148.6
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	1134.1
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	1126.7
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	1125.5
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	1124.6
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	1123.6
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	1111.1
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	1100.0
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	1097.0
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	1075.4
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	1069.8
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	1067.3
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	1059.6
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	1054.3
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	1051.8
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	1050.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	1047.6
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	1016.5
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	1008.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	1007.8
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	1001.7
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	995.0
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	968.5
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	967.3
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	965.2
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	963.9
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	963.5
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	961.5
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	951.0
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	946.4
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	940.5
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	928.5
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	925.3
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	910.9
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	875.1
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	871.0
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	866.4
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	861.2
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	818.3
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	815.0
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	805.4
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	796.3
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	795.9
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	795.1
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	790.3
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	782.5
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	770.4
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	759.8
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	748.8
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	743.3
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	741.1
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	724.3
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	718.8
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	718.5
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	706.5
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	705.4
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	696.5
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	692.4
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	686.6
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	680.0
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	677.4
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	676.4
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	665.9
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	655.1
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	654.9
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	642.3
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	632.8
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	626.5
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	620.9
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	618.2
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	596.3
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	588.5
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	585.1
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	584.5
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	584.4
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	582.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	582.4
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	574.5
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	568.5
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	565.9
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	564.9
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	564.7
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	559.2
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	552.8
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	542.6
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	541.3
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	540.0
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	538.7
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	537.2
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	536.6
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	516.7
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	515.3
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	508.2
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	497.6
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	493.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	492.7
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	489.2
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	486.5
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	485.2
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	484.9
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	480.5
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	480.3
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	461.2
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	458.4
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	458.1
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	450.9
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	450.1
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	448.5
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	447.8
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	444.2
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	441.4
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	441.1
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	440.0
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	439.6
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	431.5
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	413.4
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	413.2
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	407.7
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	390.7
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	390.4
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	388.2
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	380.2
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	378.0
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	377.0
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	368.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	362.4
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	362.0
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	358.1
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	357.4
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	343.2
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	343.0
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	342.0
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	340.5
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	339.9
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	338.0
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	328.5
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	327.3
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	326.8
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	319.5
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	315.5
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	314.4
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	310.8
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	300.0
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	299.0
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	295.0
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	286.2
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	283.9
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	283.0
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	275.3
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	262.8
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	261.9
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	259.8
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	257.2
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	251.9
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	245.5
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	242.9
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	242.9
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	237.9
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	235.3
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	227.7
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	226.8
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	215.1
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	214.4
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	214.3
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	213.9
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	213.6
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	205.1
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	204.8
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	202.1
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	200.8
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	199.0
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	197.6
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	197.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	194.9
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	192.2
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	191.6
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	189.6
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	189.1
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	188.4
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	184.7
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	184.5
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	181.2
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	180.0
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	170.8
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	168.9
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	167.7
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	166.0
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	161.4
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	161.0
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	159.1
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	152.3
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	151.3
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	150.7
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	149.0
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	148.9
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	147.9
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	144.9
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	138.8
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	137.8
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	135.6
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	135.1
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	134.1
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	132.5
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	131.0
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	121.0
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	115.3
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	114.5
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	112.8
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	110.0
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	109.8
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	103.3
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	103.2
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	103.1
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	98.5
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	91.9
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	91.8
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	91.7
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	90.4
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	90.3
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	88.2
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	87.6
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	86.3
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	84.7
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	84.6
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	82.0
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	82.0
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	81.2
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	80.3
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	79.0
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	78.4
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	74.4
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	73.7
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	70.1
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	69.7
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	69.2
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	66.4
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	65.9
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	63.3
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	62.6
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	61.9
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	61.8
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	61.4
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	61.0
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	60.9
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	60.9
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	60.8
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	60.0
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	59.9
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	59.7
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	56.4
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	56.3
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	55.6
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	53.5
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	52.4
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	50.9
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	50.6
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	50.3
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	49.4
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	48.5
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	48.2
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	47.2
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	46.6
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	45.4
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	45.2
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	45.2
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	45.2
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	44.6
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	43.2
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	42.6
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	42.4
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	41.3
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	40.2
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	37.6
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	36.7
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	36.1
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	35.6
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	33.3
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	32.9
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	31.1
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	29.6
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	29.5
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	28.6
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	27.9
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	27.9
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	27.8
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	25.8
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	25.4
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	25.2
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	24.6
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	24.5
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	23.6
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	23.3
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	19.6
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	19.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	19.0
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	18.7
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	18.6
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	18.1
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	15.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	15.8
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	15.4
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	15.1
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	13.7
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	11.2
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	9.4
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	9.2
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	9.1
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	7.2
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

TIMP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 291.55

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

914.9

Number of samples

231

Samples

Sample	Description	pTPM
DO23547	74 years, male, NA, stage:1, alive, 1020 days	10565.0
DO48747	62 years, male, NA, stage:3, alive, 540 days	8487.0
DO50845	72 years, male, NA, stage:3, alive, 210 days	6168.3
DO48697	64 years, female, NA, stage:2, dead, 810 days	5362.7
DO45297	61 years, female, NA, stage:4, dead, 1260 days	5261.5
DO45289	78 years, female, NA, stage:3, alive, 360 days	5158.4
DO45283	60 years, male, NA, stage:3, alive, 510 days	4661.5
DO45139	63 years, male, NA, stage:3, alive, 1320 days	4405.7
DO45251	57 years, female, NA, stage:2, alive, 900 days	4175.3
DO48720	62 years, female, NA, stage:2, alive, 570 days	3745.2
DO45273	62 years, male, NA, stage:2, alive, 480 days	3652.2
DO23530	53 years, male, NA, stage:4, dead, 180 days	3377.8
DO45109	63 years, male, NA, stage:2, alive, 1590 days	3277.4
DO45301	56 years, male, NA, stage:2, dead, 1440 days	2809.6
DO45285	59 years, male, NA, stage:3, alive, 480 days	2801.0
DO50778	60 years, male, NA, stage:4, alive, 630 days	2772.5
DO45157	62 years, male, NA, stage:2, alive, 1980 days	2712.3
DO48712	50 years, male, NA, stage:2, alive, 810 days	2618.7
DO45249	57 years, male, NA, stage:1, alive, 630 days	2597.4
DO45241	49 years, male, NA, stage:1, alive, 1080 days	2594.6
DO23535	67 years, male, NA, stage:1, alive, 960 days	2572.7
DO48700	78 years, female, NA, stage:2, alive, 810 days	2567.2
DO48728	74 years, female, NA, stage:2, alive, 150 days	2492.1
DO45135	77 years, male, NA, stage:1, alive, 1410 days	2376.9
DO45279	67 years, male, NA, stage:3, alive, 1290 days	2345.2
DO45307	54 years, female, NA, stage:4, dead, 240 days	2255.1
DO50800	74 years, male, NA, stage:2, alive, 510 days	2160.2
DO45287	74 years, male, NA, stage:1, alive, 390 days	2132.1
DO45239	42 years, male, NA, stage:2, alive, 870 days	2037.6
DO50805	72 years, male, NA, stage:2, alive, 690 days	1964.8
DO45137	38 years, male, NA, stage:1, alive, 1320 days	1933.3
DO23510	80 years, female, NA, stage:2, alive, 870 days	1930.6
DO50855	47 years, male, NA, stage:2, alive, 570 days	1888.7
DO45153	77 years, female, NA, stage:2, alive, 1380 days	1832.5
DO45263	67 years, male, NA, stage:3, dead, 270 days	1707.8
DO45159	65 years, male, NA, stage:3, alive, 1470 days	1707.7
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1700.2
DO45243	74 years, female, NA, stage:3, alive, 930 days	1670.3
DO45305	66 years, male, NA, stage:4, alive, 300 days	1644.3
DO50850	74 years, male, NA, stage:3, alive, 720 days	1637.7
DO45165	75 years, male, NA, stage:2, alive, 690 days	1636.5
DO45223	67 years, male, NA, stage:4, alive, 1020 days	1547.5
DO23523	52 years, male, NA, stage:3, alive, 1080 days	1539.2
DO45095	66 years, male, NA, stage:2, alive, 1620 days	1527.4
DO23526	66 years, male, NA, stage:3, alive, 1050 days	1522.2
DO45103	47 years, male, NA, stage:3, alive, 450 days	1498.3
DO45141	73 years, male, NA, stage:2, alive, 1320 days	1453.0
DO50809	56 years, male, NA, stage:3, dead, 720 days	1403.6
DO48733	72 years, male, NA, stage:2, alive, 600 days	1398.6
DO50776	75 years, male, NA, stage:1, alive, 690 days	1388.6
DO23519	65 years, male, NA, stage:3, alive, 630 days	1369.5
DO45191	61 years, female, NA, stage:2, alive, 1200 days	1349.2
DO45213	58 years, male, NA, stage:1, alive, 1200 days	1339.9
DO23515	71 years, male, NA, stage:2, alive, 1230 days	1332.4
DO45231	84 years, male, NA, stage:2, alive, 930 days	1332.1
DO45277	64 years, male, NA, stage:3, alive, 600 days	1305.8
DO45233	83 years, male, NA, stage:3, alive, 900 days	1268.1
DO50791	79 years, female, NA, stage:1, dead, 480 days	1267.3
DO227801	77 years, female, NA, stage:1, alive, 660 days	1251.1
DO45207	68 years, male, NA, stage:1, alive, 1050 days	1239.8
DO45275	65 years, male, NA, stage:3, dead, 10 days	1235.7
DO48736	76 years, female, NA, stage:1, alive, 600 days	1224.7
DO48743	69 years, female, NA, stage:2, alive, 570 days	1208.2
DO45229	74 years, male, NA, stage:1, alive, 990 days	1152.6
DO45245	75 years, female, NA, stage:2, dead, 240 days	1123.0
DO45189	85 years, female, NA, stage:2, alive, 1200 days	1119.5
DO45281	83 years, male, NA, stage:4, alive, 750 days	1115.6
DO45143	69 years, male, NA, stage:3, alive, 1290 days	1093.0
DO50774	68 years, female, NA, stage:2, alive, 720 days	1091.2
DO45225	69 years, male, NA, stage:1, alive, 1050 days	1077.2
DO45155	69 years, male, NA, stage:2, alive, 2160 days	1035.1
DO45205	67 years, female, NA, stage:2, dead, 90 days	1024.5
DO45185	89 years, male, NA, stage:2, alive, 600 days	1024.0
DO48737	52 years, male, NA, stage:1, alive, 720 days	994.2
DO45299	70 years, female, NA, stage:1, alive, 1440 days	985.1
DO48717	54 years, male, NA, stage:4, dead, 180 days	972.0
DO50819	72 years, female, NA, stage:2, alive, 510 days	936.3
DO48725	66 years, male, NA, stage:1, alive, 780 days	921.3
DO45092	62 years, male, NA, stage:4, dead, 1200 days	919.6
DO23548	78 years, female, NA, stage:1, alive, 840 days	912.4
DO45303	62 years, female, NA, stage:3, alive, 990 days	882.4
DO50808	68 years, male, NA, stage:2, alive, 570 days	835.3
DO23544	67 years, male, NA, stage:2, alive, 960 days	828.8
DO23551	73 years, male, NA, stage:3, dead, 150 days	818.3
DO48761	55 years, male, NA, stage:2, alive, 870 days	795.6
DO45219	78 years, male, NA, stage:2, alive, 1080 days	787.4
DO45183	72 years, female, NA, stage:2, dead, 570 days	786.8
DO23546	63 years, male, NA, stage:2, alive, 1050 days	752.5
DO48693	71 years, male, NA, stage:2, alive, 900 days	684.5
DO23527	72 years, male, NA, stage:1, alive, 1050 days	663.8
DO50803	62 years, female, NA, stage:1, alive, 540 days	657.2
DO45235	68 years, female, NA, stage:1, alive, 900 days	641.3
DO50829	78 years, male, NA, stage:3, alive, 570 days	608.8
DO48759	73 years, male, NA, stage:3, alive, 720 days	587.4
DO45201	49 years, male, NA, stage:1, alive, 900 days	577.6
DO23541	65 years, male, NA, stage:2, alive, 930 days	572.9
DO48704	68 years, female, NA, stage:3, alive, 750 days	547.1
DO48730	73 years, female, NA, stage:2, alive, 630 days	541.8
DO48732	73 years, male, NA, stage:3, alive, 630 days	537.6
DO23524	71 years, female, NA, stage:2, alive, 1050 days	531.5
DO45181	84 years, female, NA, stage:2, alive, 1200 days	528.0
DO48701	78 years, male, NA, stage:2, alive, 780 days	518.4
DO45261	74 years, male, NA, stage:3, alive, 990 days	498.3
DO45269	59 years, male, NA, stage:3, alive, 750 days	491.0
DO45253	50 years, male, NA, stage:2, alive, 870 days	451.6
DO23540	73 years, male, NA, stage:1, alive, 750 days	443.8
DO45195	62 years, male, NA, stage:1, alive, 390 days	442.4
DO45179	78 years, female, NA, stage:2, alive, 600 days	437.6
DO48679	72 years, male, NA, stage:2, alive, 1200 days	431.1
DO48682	72 years, female, NA, stage:3, dead, 120 days	421.8
DO23543	63 years, male, NA, stage:2, alive, 1020 days	405.5
DO45169	74 years, male, NA, stage:3, alive, 1350 days	395.1
DO45121	61 years, male, NA, stage:3, alive, 1530 days	386.3
DO50806	70 years, male, NA, stage:4, alive, 540 days	380.8
DO45099	46 years, male, NA, stage:3, alive, 1590 days	377.7
DO45257	46 years, male, NA, stage:3, alive, 810 days	351.3
DO48742	76 years, male, NA, stage:2, alive, 600 days	343.7
DO23531	78 years, female, NA, stage:3, alive, 900 days	332.2
DO45197	51 years, male, NA, stage:2, alive, 1170 days	317.5
DO23518	67 years, male, NA, stage:2, alive, 1320 days	308.6
DO48716	71 years, male, NA, stage:2, alive, 720 days	295.9
DO45203	71 years, female, NA, stage:2, alive, 1170 days	295.0
DO45123	78 years, female, NA, stage:2, dead, 570 days	288.1
DO50793	76 years, male, NA, stage:4, alive, 540 days	285.0
DO23514	64 years, male, NA, stage:2, alive, 1290 days	278.4
DO45127	73 years, male, NA, stage:3, dead, 420 days	276.2
DO48760	70 years, female, NA, stage:2, alive, 690 days	276.0
DO50820	77 years, female, NA, stage:3, alive, 510 days	273.0
DO23545	67 years, male, NA, stage:2, dead, 570 days	266.7
DO45187	32 years, female, NA, stage:1, alive, 1260 days	265.3
DO45267	73 years, male, NA, stage:3, dead, 570 days	265.0
DO48751	68 years, male, NA, stage:2, dead, 480 days	260.4
DO45161	74 years, male, NA, stage:2, dead, 540 days	256.0
DO45094	76 years, male, NA, stage:3, alive, 1650 days	254.1
DO50787	63 years, male, NA, stage:3, alive, 480 days	251.5
DO45125	58 years, male, NA, stage:3, alive, 1680 days	250.4
DO50813	56 years, male, NA, stage:2, alive, 420 days	234.6
DO45259	65 years, male, NA, stage:3, alive, 330 days	234.2
DO50798	77 years, male, NA, stage:3, dead, 30 days	221.5
DO23525	71 years, male, NA, stage:4, alive, 1050 days	221.0
DO45115	81 years, male, NA, stage:2, alive, 840 days	218.5
DO45173	63 years, male, NA, stage:3, alive, 1170 days	213.6
DO23550	69 years, male, NA, stage:1, alive, 990 days	212.8
DO45101	63 years, male, NA, stage:2, alive, 1680 days	204.7
DO45265	73 years, male, NA, stage:3, alive, 1020 days	189.8
DO45221	75 years, female, NA, stage:4, dead, 390 days	187.0
DO23536	56 years, male, NA, stage:2, alive, 930 days	182.3
DO45119	74 years, male, NA, stage:3, dead, 510 days	182.2
DO45209	70 years, male, NA, stage:4, alive, 1350 days	181.0
DO48723	73 years, male, NA, stage:1, alive, 600 days	179.2
DO45211	76 years, male, NA, stage:3, alive, 240 days	171.1
DO45096	69 years, male, NA, stage:2, dead, 1290 days	169.2
DO45217	69 years, female, NA, stage:3, dead, 270 days	166.4
DO45215	65 years, male, NA, stage:2, alive, 1170 days	165.9
DO48674	80 years, male, NA, stage:2, alive, 1260 days	153.1
DO50802	49 years, male, NA, stage:2, alive, 930 days	142.8
DO227643	79 years, male, NA, stage:2, alive, 1260 days	138.5
DO50840	49 years, male, NA, stage:2, alive, 330 days	136.0
DO50818	65 years, male, NA, stage:2, alive, 510 days	134.3
DO50785	37 years, male, NA, stage:4, dead, 90 days	133.2
DO23517	62 years, male, NA, stage:2, alive, 1200 days	128.9
DO45091	56 years, male, NA, stage:2, dead, 1320 days	125.8
DO23509	60 years, male, NA, stage:3, dead, 780 days	125.0
DO48672	81 years, male, NA, stage:2, alive, 450 days	123.9
DO45247	31 years, female, NA, stage:2, alive, 210 days	115.3
DO23512	60 years, male, NA, stage:1, alive, 1260 days	109.4
DO23528	45 years, female, NA, stage:2, alive, 1020 days	109.0
DO23538	67 years, male, NA, stage:2, alive, 450 days	105.6
DO45145	78 years, male, NA, stage:3, dead, 60 days	97.5
DO45111	74 years, male, NA, stage:2, alive, 1590 days	94.9
DO23537	79 years, male, NA, stage:2, dead, 900 days	92.7
DO48741	64 years, male, NA, stage:3, alive, 240 days	91.7
DO45149	70 years, female, NA, stage:2, alive, 1260 days	91.6
DO45199	86 years, female, NA, stage:2, alive, 1350 days	89.5
DO50815	62 years, male, NA, stage:3, alive, 150 days	88.4
DO50804	81 years, male, NA, stage:2, alive, 720 days	87.4
DO50807	67 years, male, NA, stage:1, alive, 540 days	87.0
DO45171	56 years, male, NA, stage:3, alive, 600 days	86.5
DO23532	71 years, female, NA, stage:1, alive, 960 days	80.5
DO23549	74 years, male, NA, stage:3, alive, 990 days	79.5
DO50816	63 years, male, NA, stage:2, alive, 390 days	74.7
DO45167	67 years, male, NA, stage:2, dead, 1440 days	74.2
DO50857	72 years, male, NA, stage:2, alive, 210 days	70.7
DO50839	47 years, female, NA, stage:3, alive, 330 days	70.0
DO23539	77 years, male, NA, stage:1, alive, 1110 days	63.3
DO45107	63 years, female, NA, stage:2, alive, 1710 days	62.1
DO48677	58 years, male, NA, stage:3, alive, 1140 days	61.3
DO48715	58 years, female, NA, stage:2, dead, 690 days	60.9
DO50822	66 years, male, NA, stage:2, alive, 510 days	60.8
DO50789	73 years, female, NA, stage:2, alive, 570 days	59.6
DO23529	72 years, male, NA, stage:4, alive, 930 days	58.5
DO45093	71 years, male, NA, stage:2, dead, 720 days	57.2
DO48721	58 years, female, NA, stage:1, alive, 900 days	52.7
DO50814	83 years, male, NA, stage:3, alive, 420 days	51.7
DO45227	57 years, female, NA, stage:2, alive, 1020 days	50.9
DO50844	75 years, male, NA, stage:4, alive, 300 days	50.9
DO50825	70 years, male, NA, stage:2, alive, 390 days	45.6
DO50799	66 years, female, NA, stage:2, alive, 540 days	44.1
DO23508	79 years, female, NA, stage:2, alive, 390 days	43.4
DO48695	77 years, male, NA, stage:2, alive, 720 days	42.0
DO45255	81 years, male, NA, stage:3, alive, 720 days	40.3
DO48719	80 years, male, NA, stage:2, alive, 690 days	40.1
DO45117	73 years, female, NA, stage:2, dead, 1110 days	37.4
DO23542	66 years, male, NA, stage:3, alive, 960 days	36.1
DO45105	61 years, male, NA, stage:1, alive, 1680 days	34.9
DO45131	53 years, male, NA, stage:4, dead, 360 days	33.3
DO23552	80 years, female, NA, stage:1, alive, 810 days	31.8
DO23533	61 years, male, NA, stage:2, alive, 900 days	31.3
DO50811	62 years, male, NA, stage:1, alive, 450 days	30.9
DO23521	63 years, male, NA, stage:3, alive, 1110 days	30.7
DO45113	58 years, male, NA, stage:3, alive, 1560 days	30.2
DO45193	68 years, female, NA, stage:4, dead, 120 days	25.8
DO23534	60 years, male, NA, stage:2, alive, 840 days	25.4
DO48757	68 years, female, NA, stage:3, alive, 480 days	25.3
DO50817	75 years, male, NA, stage:2, alive, 390 days	23.4
DO45129	61 years, male, NA, stage:3, alive, 1470 days	21.7
DO45133	64 years, male, NA, stage:3, dead, 660 days	20.5
DO23516	69 years, male, NA, stage:3, dead, 20 days	20.1
DO48681	57 years, male, NA, stage:2, alive, 900 days	17.8
DO50783	62 years, male, NA, stage:3, alive, 480 days	16.8
DO45097	69 years, male, NA, stage:3, alive, 1620 days	14.3
DO50859	77 years, male, NA, stage:2, alive, 180 days	13.8
DO48727	81 years, female, NA, stage:2, dead, 390 days	12.0
DO48746	76 years, male, NA, stage:3, alive, 570 days	12.0
DO23513	76 years, male, NA, stage:3, alive, 1200 days	9.7
DO48706	72 years, male, NA, stage:2, alive, 870 days	9.7
DO23511	83 years, female, NA, stage:3, dead, 180 days	9.5
DO45237	58 years, male, NA, stage:2, alive, 900 days	8.1
DO45175	74 years, male, NA, stage:2, alive, 1140 days	5.5
DO50832	73 years, male, NA, stage:3, alive, 90 days	5.4
DO45163	76 years, male, NA, stage:2, alive, 960 days	3.4
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LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
877	Tumor	2.7
343	Tumor	2.0
311	Tumor	1.8
917	Tumor	1.8
671	Tumor	1.7
217	Tumor	1.7
813	Tumor	1.6
943	Tumor	1.6
455	Tumor	1.5
383	Tumor	1.4
713	Tumor	1.4
535	Tumor	1.4
223	Tumor	1.4
213	Tumor	1.3
975	Tumor	1.3
697	Tumor	1.2
817	Tumor	1.2
211	Tumor	1.2
355	Tumor	1.2
375	Tumor	1.2
881	Tumor	1.2
421	Tumor	1.1
617	Tumor	1.1
491	Tumor	1.1
814	Normal	1.1
545	Tumor	1.0
447	Tumor	1.0
187	Tumor	0.9
536	Normal	0.9
297	Tumor	0.9
983	Tumor	0.8
385	Tumor	0.8
135	Tumor	0.8
497	Tumor	0.8
141	Tumor	0.8
563	Tumor	0.8
395	Tumor	0.7
715	Tumor	0.7
331	Tumor	0.7
191	Tumor	0.7
185	Tumor	0.7
283	Tumor	0.6
365	Tumor	0.6
433	Tumor	0.5
823	Tumor	0.5
923	Tumor	0.5
483	Tumor	0.5
471	Tumor	0.4
137	Tumor	0.4
427	Tumor	0.4
883	Tumor	0.4
492	Normal	0.4
527	Tumor	0.4
367	Tumor	0.4
145	Tumor	0.4
963	Tumor	0.4
444	Normal	0.3
857	Tumor	0.3
195	Tumor	0.2
277	Tumor	0.2
861	Tumor	0.2
515	Tumor	0.2
161	Tumor	0.2
685	Tumor	0.2
525	Tumor	0.2
498	Normal	0.2
557	Tumor	0.2
863	Tumor	0.2
538	Normal	0.2
493	Tumor	0.2
391	Tumor	0.1
641	Tumor	0.1
745	Tumor	0.1
284	Normal	0.1
467	Tumor	0.1
921	Tumor	0.1
1045	Tumor	0.1
721	Tumor	0.1
672	Normal	0.1
384	Normal	0.0
224	Normal	0.0
913	Tumor	0.0
415	Tumor	0.0
463	Tumor	0.0
523	Tumor	0.0
361	Tumor	0.0
387	Tumor	0.0
528	Normal	0.0
546	Normal	-0.1
852	Normal	-0.1
364	Normal	-0.1
368	Normal	-0.1
517	Tumor	-0.1
332	Normal	-0.1
816	Normal	-0.1
366	Normal	-0.1
228	Normal	-0.1
286	Normal	-0.1
363	Tumor	-0.1
376	Normal	-0.2
722	Normal	-0.2
815	Tumor	-0.2
982	Normal	-0.2
413	Tumor	-0.2
416	Normal	-0.2
1015	Tumor	-0.2
851	Tumor	-0.2
354	Normal	-0.2
665	Tumor	-0.2
818	Normal	-0.2
686	Normal	-0.2
212	Normal	-0.2
696	Normal	-0.2
484	Normal	-0.2
125	Tumor	-0.2
858	Normal	-0.2
824	Normal	-0.2
342	Normal	-0.2
392	Normal	-0.2
192	Normal	-0.2
314	Normal	-0.2
925	Tumor	-0.2
488	Normal	-0.2
328	Normal	-0.2
344	Normal	-0.2
478	Normal	-0.3
268	Normal	-0.3
636	Normal	-0.3
422	Normal	-0.3
534	Normal	-0.3
341	Tumor	-0.3
524	Normal	-0.3
352	Normal	-0.3
494	Normal	-0.3
386	Normal	-0.3
916	Normal	-0.3
394	Normal	-0.3
388	Normal	-0.3
227	Tumor	-0.3
358	Normal	-0.3
1044	Normal	-0.3
434	Normal	-0.3
573	Tumor	-0.3
716	Normal	-0.3
1028	Normal	-0.3
396	Normal	-0.3
278	Normal	-0.3
312	Normal	-0.3
953	Tumor	-0.4
976	Normal	-0.4
146	Normal	-0.4
984	Normal	-0.4
951	Tumor	-0.4
353	Tumor	-0.4
362	Normal	-0.4
615	Tumor	-0.4
618	Normal	-0.4
425	Tumor	-0.4
661	Tumor	-0.4
327	Tumor	-0.4
785	Tumor	-0.4
298	Normal	-0.4
113	Tumor	-0.4
356	Normal	-0.4
443	Tumor	-0.4
616	Normal	-0.4
912	Normal	-0.4
526	Normal	-0.4
666	Normal	-0.4
142	Normal	-0.5
214	Normal	-0.5
1026	Normal	-0.5
412	Normal	-0.5
778	Normal	-0.5
756	Normal	-0.5
628	Normal	-0.5
313	Tumor	-0.5
513	Tumor	-0.5
642	Normal	-0.5
452	Normal	-0.5
445	Tumor	-0.5
514	Normal	-0.5
664	Normal	-0.5
978	Normal	-0.5
724	Normal	-0.5
695	Tumor	-0.5
448	Normal	-0.5
878	Normal	-0.5
516	Normal	-0.5
1025	Tumor	-0.5
914	Normal	-0.5
1043	Tumor	-0.5
714	Normal	-0.5
466	Normal	-0.5
188	Normal	-0.5
966	Normal	-0.5
1014	Normal	-0.5
627	Tumor	-0.5
468	Normal	-0.5
882	Normal	-0.5
1031	Tumor	-0.5
554	Normal	-0.5
285	Tumor	-0.5
662	Normal	-0.5
1016	Normal	-0.5
518	Normal	-0.5
635	Tumor	-0.6
393	Tumor	-0.6
487	Tumor	-0.6
957	Tumor	-0.6
558	Normal	-0.6
786	Normal	-0.6
884	Normal	-0.6
981	Tumor	-0.6
737	Tumor	-0.6
474	Normal	-0.6
431	Tumor	-0.6
186	Normal	-0.6
647	Tumor	-0.6
424	Normal	-0.6
138	Normal	-0.6
432	Normal	-0.6
755	Tumor	-0.7
124	Normal	-0.7
862	Normal	-0.7
446	Normal	-0.7
262	Normal	-0.7
537	Tumor	-0.7
465	Tumor	-0.7
148	Normal	-0.7
218	Normal	-0.7
456	Normal	-0.7
911	Tumor	-0.7
414	Normal	-0.7
351	Tumor	-0.7
865	Tumor	-0.7
648	Normal	-0.7
867	Tumor	-0.7
663	Tumor	-0.7
1013	Tumor	-0.7
426	Normal	-0.7
746	Normal	-0.7
477	Tumor	-0.7
126	Normal	-0.7
461	Tumor	-0.7
553	Tumor	-0.7
873	Tumor	-0.7
482	Normal	-0.7
428	Normal	-0.7
572	Normal	-0.7
147	Tumor	-0.8
162	Normal	-0.8
977	Tumor	-0.8
1032	Normal	-0.8
473	Tumor	-0.8
868	Normal	-0.8
196	Normal	-0.8
451	Tumor	-0.8
864	Normal	-0.8
222	Normal	-0.8
221	Tumor	-0.8
777	Tumor	-0.8
472	Normal	-0.8
464	Normal	-0.8
1042	Normal	-0.8
954	Normal	-0.8
574	Normal	-0.8
874	Normal	-0.8
952	Normal	-0.8
411	Tumor	-0.9
1046	Normal	-0.9
698	Normal	-0.9
564	Normal	-0.9
436	Normal	-0.9
956	Normal	-0.9
567	Tumor	-0.9
132	Normal	-0.9
968	Normal	-0.9
918	Normal	-0.9
172	Normal	-0.9
136	Normal	-1.0
866	Normal	-1.0
937	Tumor	-1.0
1041	Tumor	-1.0
958	Normal	-1.0
481	Tumor	-1.0
357	Tumor	-1.0
462	Normal	-1.0
171	Tumor	-1.0
743	Tumor	-1.0
922	Normal	-1.0
568	Normal	-1.0
924	Normal	-1.0
114	Normal	-1.1
423	Tumor	-1.1
1021	Tumor	-1.1
938	Normal	-1.1
964	Normal	-1.1
128	Normal	-1.1
1022	Normal	-1.1
111	Normal	-1.1
533	Tumor	-1.1
1027	Tumor	-1.1
131	Tumor	-1.1
965	Tumor	-1.2
267	Tumor	-1.2
926	Normal	-1.2
944	Normal	-1.2
232	Normal	-1.2
112	Tumor	-1.2
955	Tumor	-1.3
272	Normal	-1.3
127	Tumor	-1.3
967	Tumor	-1.3
915	Tumor	-1.3
261	Tumor	-1.3
571	Tumor	-1.4
723	Tumor	-1.5
258	Normal	-1.5
271	Tumor	-1.5
435	Tumor	-1.5
123	Tumor	-1.6
738	Normal	-1.6
744	Normal	-1.7
231	Tumor	-1.7
257	Tumor	-1.8
742	Normal	-1.9
741	Tumor	-2.0
728	Normal	-2.2
727	Tumor	-2.4
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA053417	Antibody CAB022360
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma