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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:83.2 nTPM
HPA Brain:92.5 nTPM
GTEx:83.2 nTPM
FANTOM5:75.2 Scaled Tags Per Million
Mouse:60.0 nTPM
Allen mouse:6.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031572Antibody HPA031573
Glial cells MediumLow
Neuronal cells MediumHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 67.8
2481 Female, age 94, left hemisphere 107.2
2288 Male, age 75, left hemisphere 80.8
1781 Male, age 74, unknown 66.1
2289 Male, age 61, right hemisphere 65.9
2290 Female, age 72, unknown 60.8
1854 Male, age 80, left hemisphere 58.5
1857 Female, age 85, left hemisphere 53.3
2846 Female, age 79, unknown 49.7
Globus pallidus, externus
nTPM: 75.7
2772 Female, age 79, unknown 108.9
1996 Male, age 80, right hemisphere 76.2
2646 Male, age 61, right hemisphere 75.7
2395 Male, age 75, both hemispheres 71.1
2567 Female, age 72, unknown 46.3
Globus pallidus, internus
nTPM: 74.5
2483 Female, age 94, right hemisphere 101.7
2287 Male, age 75, right hemisphere 85.7
1818 Male, age 74, unknown 75.3
2778 Female, age 91, both hemispheres 73.0
2037 Male, age 80, right hemisphere 69.8
2111 Female, age 85, right hemisphere 61.2
2566 Female, age 72, unknown 54.7
Nucleus accumbens
nTPM: 70.0
2286 Male, age 75, left hemisphere 97.7
2391 Female, age 94, left hemisphere 78.2
2732 Male, age 80, right hemisphere 73.6
2824 Male, age 61, right hemisphere 69.2
1856 Female, age 91, right hemisphere 69.0
2698 Female, age 72, unknown 60.2
1806 Female, age 85, left hemisphere 57.0
1783 Male, age 74, unknown 55.5
Nucleus basalis of Meynert
nTPM: 69.8
2484 Female, age 94, left hemisphere 77.4
2821 Male, age 75, both hemispheres 76.4
2569 Male, age 61, both hemispheres 74.7
2393 Male, age 80, right hemisphere 50.7
Nucleus of the diagonal band
nTPM: 80.1
1812 Female, age 91, both hemispheres 88.3
2775 Male, age 80, right hemisphere 83.2
1979 Male, age 74, unknown 80.4
2029 Male, age 61, right hemisphere 75.1
2195 Female, age 85, both hemispheres 73.6
Putamen
nTPM: 58.2
2482 Female, age 94, left hemisphere 93.4
1937 Female, age 91, right hemisphere 62.2
2647 Male, age 75, left hemisphere 61.2
2466 Female, age 79, unknown 54.3
1838 Male, age 80, right hemisphere 48.8
1829 Male, age 74, unknown 44.3
2489 Female, age 72, unknown 43.0
Septal nuclei
nTPM: 79.2
1960 Male, age 74, unknown 85.5
2031 Female, age 72, unknown 83.2
2009 Female, age 91, both hemispheres 83.1
2629 Female, age 94, right hemisphere 79.3
2199 Male, age 80, right hemisphere 77.0
2394 Male, age 61, left hemisphere 73.2
2059 Female, age 85, both hemispheres 72.8
Stria terminalis, bed nucleus
nTPM: 92.5
2201 Male, age 74, unknown 99.4
1974 Female, age 91, both hemispheres 96.5
2486 Female, age 94, both hemispheres 81.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 76.4
Samples: 246

Max nTPM: 204.3
Min nTPM: 48.6
Std nTPM: 16.4
Median nTPM: 73.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 204.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 144.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 129.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 115.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 115.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 114.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 109.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 108.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 107.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 106.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 105.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 104.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 103.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 102.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 102.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 100.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 98.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 98.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 97.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 97.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 96.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 96.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 96.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 95.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 95.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 95.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 94.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 94.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 94.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 93.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 92.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 92.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 92.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 92.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 91.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 91.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 91.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 90.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 89.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 88.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 88.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 87.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 87.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 87.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 86.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 86.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 86.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 85.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 85.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 85.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 84.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 84.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 84.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 84.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 84.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 84.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 84.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 84.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 83.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 83.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 83.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 83.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 82.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 82.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 82.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 82.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 82.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 82.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 82.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 81.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 81.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 81.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 81.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 81.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 81.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 80.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 80.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 80.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 80.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 80.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 79.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 79.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 79.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 79.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 79.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 79.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 79.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 79.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 78.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 78.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 78.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 78.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 78.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 77.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 77.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 77.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 77.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 77.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 76.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 76.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 76.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 76.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 76.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 76.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 76.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 76.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 76.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 76.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 75.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 75.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 75.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 75.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 74.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 74.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 73.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 73.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 73.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 73.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 73.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 73.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 72.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 72.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 72.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 72.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 72.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 72.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 71.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 71.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 71.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 71.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 71.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 71.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 71.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 71.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 71.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 70.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 70.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 70.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 70.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 70.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 70.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 70.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 70.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 70.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 69.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 69.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 69.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 69.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 69.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 69.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 69.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 69.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 69.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 69.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 69.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 69.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 68.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 68.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 68.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 68.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 68.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 68.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 68.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 68.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 68.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 67.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 67.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 67.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 67.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 67.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 66.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 66.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 66.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 66.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 66.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 66.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 66.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 66.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 65.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 65.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 65.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 65.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 64.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 64.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 64.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 63.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 63.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 63.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 63.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 63.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 63.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 63.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 63.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 62.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 62.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 61.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 61.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 61.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 60.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 60.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 60.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 59.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 58.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 58.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 58.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 58.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 57.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 57.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 57.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 57.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 57.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 56.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 56.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 56.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 56.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 55.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 54.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 54.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 52.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 51.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 50.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 50.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 83.2
Samples: 246

Max nTPM: 188.5
Min nTPM: 45.7
Std nTPM: 20.5
Median nTPM: 78.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 188.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 185.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 167.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 143.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 140.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 137.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 137.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 137.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 136.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 129.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 124.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 123.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 121.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 118.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 115.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 115.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 113.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 113.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 111.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 110.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 109.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 108.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 108.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 107.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 107.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 106.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 106.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 106.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 104.8
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 104.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 104.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 104.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 104.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 103.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 103.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 103.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 102.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 102.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 102.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 102.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 102.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 102.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 101.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 100.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 99.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 98.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 97.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 97.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 96.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 96.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 95.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 95.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 94.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 94.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 93.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 93.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 89.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 89.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 89.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 89.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 89.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 88.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 88.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 88.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 88.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 87.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 87.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 87.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 87.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 87.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 86.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 86.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 86.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 85.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 85.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 85.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 85.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 85.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 85.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 85.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 85.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 85.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 85.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 84.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 84.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 84.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 84.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 84.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 84.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 84.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 84.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 84.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 83.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 83.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 83.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 83.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 82.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 82.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 82.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 82.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 82.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 82.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 81.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 81.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 81.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 81.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 81.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 80.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 80.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 80.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 80.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 80.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 79.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 79.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 79.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 79.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 78.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 78.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 78.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 78.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 78.7
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 78.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 78.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 78.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 78.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 78.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 77.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 77.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 77.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 77.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 77.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 77.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 77.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 77.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 76.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 76.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 76.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 76.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 76.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 75.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 75.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 75.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 75.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 75.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 75.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 75.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 75.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 74.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 74.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 74.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 74.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 74.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 74.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 74.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 74.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 74.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 73.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 73.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 72.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 72.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 72.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 72.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 72.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 71.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 71.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 71.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 71.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 71.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 71.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 71.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 71.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 71.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 71.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 71.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 70.9
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 70.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 70.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 70.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 70.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 70.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 70.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 70.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 70.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 69.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 69.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 69.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 69.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 69.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 69.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 69.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 68.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 68.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 68.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 68.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 68.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 68.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 67.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 67.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 67.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 67.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 67.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 67.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 67.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 67.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 67.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 67.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 67.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 67.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 66.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 66.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 65.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 65.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 65.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 65.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 65.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 64.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 64.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 64.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 64.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 64.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 63.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 63.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 63.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 63.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 63.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 62.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 62.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 62.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 62.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 62.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 61.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 61.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 61.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 61.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 60.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 60.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 59.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 58.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 57.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 56.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 52.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 51.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 45.7
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 76.7
Samples: 205

Max nTPM: 158.5
Min nTPM: 46.2
Std nTPM: 17.1
Median nTPM: 73.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 158.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 155.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 135.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 130.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 128.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 122.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 116.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 109.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 108.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 107.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 102.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 102.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 101.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 101.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 100.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 99.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 99.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 98.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 98.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 97.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 97.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 96.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 96.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 96.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 95.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 95.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 95.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 94.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 93.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 92.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 92.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 92.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 92.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 91.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 91.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 90.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 90.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 88.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 88.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 88.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 88.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 87.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 86.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 86.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 86.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 85.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 85.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 85.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 84.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 84.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 83.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 83.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 83.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 83.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 83.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 82.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 82.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 82.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 81.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 81.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 81.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 81.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 81.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 81.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 80.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 80.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 79.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 79.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 79.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 78.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 78.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 78.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 78.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 78.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 78.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 78.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 78.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 78.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 78.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 77.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 77.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 77.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 77.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 77.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 76.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 76.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 76.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 76.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 75.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 75.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 75.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 75.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 75.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 74.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 74.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 73.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 73.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 73.4
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 73.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 73.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 73.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 72.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 72.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 72.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 72.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 72.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 71.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 71.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 71.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 71.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 71.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 70.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 70.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 70.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 70.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 70.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 70.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 69.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 69.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 69.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 69.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 69.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 69.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 69.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 69.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 69.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 68.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 68.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 68.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 68.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 68.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 68.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 68.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 67.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 67.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 67.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 67.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 67.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 67.3
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 67.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 66.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 66.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 66.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 66.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 66.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 66.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 65.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 65.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 65.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 65.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 65.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 65.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 65.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 65.0
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 65.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 64.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 64.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 64.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 64.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 63.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 63.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 62.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 62.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 62.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 61.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 61.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 61.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 61.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 61.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 60.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 60.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 60.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 60.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 60.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 60.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 60.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 59.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 59.7
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 59.4
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 59.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 59.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 58.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 58.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 58.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 57.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 57.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 56.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 56.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 56.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 55.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 55.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 54.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 53.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 52.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 47.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 46.2
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

75.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 64.0
FF:10164-103B2 76 years, female 64.0
Nucleus accumbens
Scaled Tags Per Million: 74.2
FF:10037-101F1 23-56 years, mixed 74.2
Putamen
Scaled Tags Per Million: 75.2
FF:10176-103C5 60 years, female 75.2
Globus pallidus
Scaled Tags Per Million: 61.5
FF:10175-103C4 60 years, female 70.6
FF:10161-103A8 76 years, female 52.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 38.9
Samples: 4

Max nTPM: 42.1
Min nTPM: 32.0
Sample A Male 42.0
Sample B Male 42.1
Sample C Female 32.0
Sample D Female 39.5
Septum
nTPM: 60.0
Samples: 4

Max nTPM: 73.6
Min nTPM: 54.1
Sample A Male 73.6
Sample B Male 56.0
Sample C Female 54.1
Sample D Female 56.3
Ventral forebrain
nTPM: 49.6
Samples: 4

Max nTPM: 58.9
Min nTPM: 43.3
Sample A Male 49.7
Sample B Male 58.9
Sample C Female 46.5
Sample D Female 43.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.2
71836892 Antisense, RP_051017_02_F10, Mouse strain C57BL/6J (56 days, male) 3.2
68744964 Antisense, RP_050210_01_A05, Mouse strain C57BL/6J (56 days, male) 1.3
Pallidum
Expression energy: 6.8
71836892 Antisense, RP_051017_02_F10, Mouse strain C57BL/6J (56 days, male) 8.7
68744964 Antisense, RP_050210_01_A05, Mouse strain C57BL/6J (56 days, male) 4.9

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