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SLC38A7
HPA
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  • SLC38A7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC38A7
Synonyms FLJ10815
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 38 member 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband q21
Chromosome location (bp) 58665109 - 58684770
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000103042 (version 109)
Entrez gene 55238
HGNC HGNC:25582
UniProt Q9NVC3 (UniProt - Evidence at protein level)
neXtProt NX_Q9NVC3
GeneCards SLC38A7
Antibodypedia SLC38A7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Symporter that selectively cotransports sodium ions and amino acids, such as L-glutamine and L-asparagine from the lysosome into the cytoplasm and may participates in mTORC1 activation 1, 2. The transport activity requires an acidic lysosomal lumen 3.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Amino-acid transport, Ion transport, Sodium transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Sodium
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable L-amino acid transmembrane transporter activity. Predicted to be involved in amino acid transmembrane transport and sodium ion transport. Predicted to be located in axon and neuronal cell body. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC38A7-201
ENSP00000219320
ENST00000219320
Q9NVC3
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003333 [amino acid transmembrane transport]
GO:0005290 [L-histidine transmembrane transporter activity]
GO:0005313 [L-glutamate transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006865 [amino acid transport]
GO:0006867 [asparagine transport]
GO:0006868 [glutamine transport]
GO:0015179 [L-amino acid transmembrane transporter activity]
GO:0015180 [L-alanine transmembrane transporter activity]
GO:0015182 [L-asparagine transmembrane transporter activity]
GO:0015183 [L-aspartate transmembrane transporter activity]
GO:0015186 [L-glutamine transmembrane transporter activity]
GO:0015190 [L-leucine transmembrane transporter activity]
GO:0015191 [L-methionine transmembrane transporter activity]
GO:0015194 [L-serine transmembrane transporter activity]
GO:0015803 [branched-chain amino acid transport]
GO:0015807 [L-amino acid transport]
GO:0015808 [L-alanine transport]
GO:0015813 [L-glutamate transmembrane transport]
GO:0015821 [methionine transport]
GO:0015825 [L-serine transport]
GO:0016020 [membrane]
GO:0030424 [axon]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0070778 [L-aspartate transmembrane transport]
GO:0089709 [L-histidine transmembrane transport]
GO:0098655 [cation transmembrane transport]
GO:0140901 []
GO:0140902 []
GO:1902475 [L-alpha-amino acid transmembrane transport]
Show all
462 aa
50 kDa
No >9
SLC38A7-203
ENSP00000455490
ENST00000562397
H3BPV9
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   3TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
140 aa
14.6 kDa
No 3
SLC38A7-204
ENSP00000454734
ENST00000563196
H3BN87
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
94 aa
9.6 kDa
No 1
SLC38A7-205
ENSP00000455362
ENST00000564010
H3BPK8
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   9TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
373 aa
40.9 kDa
No 9
SLC38A7-206
ENSP00000454325
ENST00000564100
H3BMC5
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
354 aa
38.2 kDa
No 7
SLC38A7-207
ENSP00000457462
ENST00000564391
H3BU46
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
135 aa
14.1 kDa
No 2
SLC38A7-215
ENSP00000454646
ENST00000570101
Q9NVC3
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003333 [amino acid transmembrane transport]
GO:0005290 [L-histidine transmembrane transporter activity]
GO:0005313 [L-glutamate transmembrane transporter activity]
GO:0005515 [protein binding]
GO:0005764 [lysosome]
GO:0005765 [lysosomal membrane]
GO:0006811 [ion transport]
GO:0006814 [sodium ion transport]
GO:0006865 [amino acid transport]
GO:0006867 [asparagine transport]
GO:0006868 [glutamine transport]
GO:0015179 [L-amino acid transmembrane transporter activity]
GO:0015180 [L-alanine transmembrane transporter activity]
GO:0015182 [L-asparagine transmembrane transporter activity]
GO:0015183 [L-aspartate transmembrane transporter activity]
GO:0015186 [L-glutamine transmembrane transporter activity]
GO:0015190 [L-leucine transmembrane transporter activity]
GO:0015191 [L-methionine transmembrane transporter activity]
GO:0015194 [L-serine transmembrane transporter activity]
GO:0015803 [branched-chain amino acid transport]
GO:0015807 [L-amino acid transport]
GO:0015808 [L-alanine transport]
GO:0015813 [L-glutamate transmembrane transport]
GO:0015821 [methionine transport]
GO:0015825 [L-serine transport]
GO:0016020 [membrane]
GO:0030424 [axon]
GO:0042995 [cell projection]
GO:0043025 [neuronal cell body]
GO:0070778 [L-aspartate transmembrane transport]
GO:0089709 [L-histidine transmembrane transport]
GO:0098655 [cation transmembrane transport]
GO:0140901 []
GO:0140902 []
GO:1902475 [L-alpha-amino acid transmembrane transport]
Show all
462 aa
50 kDa
No >9
SLC38A7-216
ENSP00000456464
ENST00000570214
H3BRZ0
[Direct mapping] Putative sodium-coupled neutral amino acid transporter 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0016020 [membrane]
Show all
65 aa
7 kDa
No 2

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