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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
PRIMARY MOUSE DATA
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:168.6 nTPM
HPA Brain:120.3 nTPM
GTEx:168.6 nTPM
FANTOM5:117.3 Scaled Tags Per Million
Mouse:180.1 nTPM
Allen mouse:14.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013998Antibody HPA014144Antibody CAB068211
Glial cells Not detectedNot detectedMedium
Neuronal cells HighHighHigh







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

120.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 97.5
1857 Female, age 85, left hemisphere 135.6
2290 Female, age 72, unknown 117.8
1854 Male, age 80, left hemisphere 112.5
2846 Female, age 79, unknown 112.2
2289 Male, age 61, right hemisphere 104.5
1781 Male, age 74, unknown 93.1
2288 Male, age 75, left hemisphere 57.5
2481 Female, age 94, left hemisphere 46.8
Globus pallidus, externus
nTPM: 26.8
2646 Male, age 61, right hemisphere 36.9
2395 Male, age 75, both hemispheres 33.4
2567 Female, age 72, unknown 22.1
2772 Female, age 79, unknown 21.8
1996 Male, age 80, right hemisphere 19.6
Globus pallidus, internus
nTPM: 23.8
2287 Male, age 75, right hemisphere 45.7
2483 Female, age 94, right hemisphere 34.4
2566 Female, age 72, unknown 27.8
1818 Male, age 74, unknown 17.8
2037 Male, age 80, right hemisphere 16.3
2111 Female, age 85, right hemisphere 15.0
2778 Female, age 91, both hemispheres 9.2
Nucleus accumbens
nTPM: 120.3
1856 Female, age 91, right hemisphere 220.9
1783 Male, age 74, unknown 170.7
2824 Male, age 61, right hemisphere 166.5
1806 Female, age 85, left hemisphere 135.1
2698 Female, age 72, unknown 109.5
2286 Male, age 75, left hemisphere 72.9
2391 Female, age 94, left hemisphere 43.8
2732 Male, age 80, right hemisphere 42.9
Nucleus basalis of Meynert
nTPM: 54.5
2484 Female, age 94, left hemisphere 62.3
2821 Male, age 75, both hemispheres 57.2
2393 Male, age 80, right hemisphere 56.3
2569 Male, age 61, both hemispheres 42.2
Nucleus of the diagonal band
nTPM: 107.5
1812 Female, age 91, both hemispheres 150.6
2775 Male, age 80, right hemisphere 108.7
2029 Male, age 61, right hemisphere 101.0
2195 Female, age 85, both hemispheres 98.3
1979 Male, age 74, unknown 78.9
Putamen
nTPM: 81.5
1838 Male, age 80, right hemisphere 130.8
1937 Female, age 91, right hemisphere 124.7
1829 Male, age 74, unknown 85.7
2466 Female, age 79, unknown 72.3
2489 Female, age 72, unknown 69.2
2482 Female, age 94, left hemisphere 54.0
2647 Male, age 75, left hemisphere 34.1
Septal nuclei
nTPM: 82.1
2629 Female, age 94, right hemisphere 120.0
2009 Female, age 91, both hemispheres 104.5
1960 Male, age 74, unknown 86.8
2031 Female, age 72, unknown 77.1
2394 Male, age 61, left hemisphere 71.3
2199 Male, age 80, right hemisphere 66.0
2059 Female, age 85, both hemispheres 48.6
Stria terminalis, bed nucleus
nTPM: 98.7
2201 Male, age 74, unknown 122.7
2486 Female, age 94, both hemispheres 93.0
1974 Female, age 91, both hemispheres 80.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 140.5
Samples: 246

Max nTPM: 334.5
Min nTPM: 20.7
Std nTPM: 58.0
Median nTPM: 137.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 334.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 330.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 299.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 273.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 272.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 269.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 265.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 264.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 260.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 254.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 248.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 247.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 243.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 231.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 229.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 229.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 226.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 224.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 223.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 222.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 222.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 221.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 221.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 221.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 215.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 211.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 209.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 209.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 209.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 208.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 206.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 206.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 205.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 203.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 202.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 202.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 201.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 201.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 199.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 197.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 195.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 193.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 190.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 188.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 188.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 188.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 186.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 186.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 186.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 185.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 184.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 184.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 183.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 180.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 179.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 178.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 177.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 177.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 175.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 174.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 174.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 173.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 173.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 172.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 171.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 170.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 170.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 169.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 169.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 169.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 168.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 168.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 168.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 166.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 166.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 166.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 166.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 165.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 164.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 163.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 162.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 161.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 161.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 161.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 160.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 160.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 159.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 159.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 158.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 158.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 155.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 155.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 154.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 154.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 154.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 154.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 154.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 153.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 152.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 152.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 151.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 151.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 150.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 149.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 147.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 146.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 145.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 143.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 143.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 143.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 142.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 142.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 141.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 140.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 140.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 138.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 138.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 136.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 135.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 134.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 134.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 133.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 133.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 132.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 131.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 131.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 129.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 128.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 128.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 127.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 127.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 126.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 126.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 126.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 126.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 126.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 125.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 122.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 121.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 121.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 120.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 120.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 119.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 119.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 118.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 118.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 117.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 116.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 114.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 114.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 111.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 111.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 111.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 109.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 108.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 108.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 107.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 105.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 105.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 103.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 102.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 101.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 100.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 100.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 97.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 97.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 97.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 96.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 96.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 95.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 95.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 95.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 94.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 94.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 93.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 90.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 89.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 89.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 88.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 86.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 83.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 82.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 81.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 80.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 78.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 77.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 75.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 73.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 68.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 66.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 64.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 60.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 55.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 54.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 50.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 46.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 41.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 39.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 32.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 168.6
Samples: 246

Max nTPM: 439.2
Min nTPM: 13.2
Std nTPM: 63.1
Median nTPM: 165.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 439.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 351.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 346.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 314.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 314.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 309.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 303.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 300.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 300.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 293.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 290.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 285.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 279.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 267.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 267.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 267.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 265.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 261.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 257.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 253.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 253.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 251.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 247.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 244.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 242.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 241.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 241.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 238.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 237.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 236.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 231.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 230.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 229.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 226.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 226.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 225.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 225.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 224.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 224.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 222.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 222.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 220.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 220.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 219.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 218.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 215.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 214.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 214.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 213.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 210.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 210.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 209.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 209.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 209.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 207.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 207.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 206.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 206.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 206.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 203.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 201.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 199.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 199.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 199.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 198.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 198.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 197.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 197.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 196.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 196.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 195.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 195.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 193.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 192.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 192.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 191.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 191.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 190.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 189.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 189.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 189.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 189.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 188.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 188.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 188.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 187.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 187.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 186.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 186.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 185.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 184.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 183.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 183.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 181.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 181.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 181.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 181.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 181.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 180.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 180.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 180.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 180.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 180.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 180.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 179.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 179.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 178.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 177.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 176.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 175.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 175.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 174.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 173.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 173.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 172.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 171.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 170.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 170.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 170.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 170.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 167.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 166.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 166.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 165.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 164.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 164.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 163.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 163.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 163.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 162.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 162.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 162.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 162.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 161.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 160.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 160.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 159.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 158.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 158.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 158.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 157.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 157.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 157.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 156.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 156.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 154.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 154.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 154.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 153.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 153.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 153.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 153.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 151.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 151.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 151.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 151.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 150.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 150.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 150.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 149.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 149.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 148.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 147.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 146.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 145.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 145.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 144.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 143.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 142.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 142.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 141.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 140.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 140.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 140.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 139.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 139.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 138.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 137.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 137.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 136.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 135.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 134.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 133.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 133.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 132.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 131.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 130.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 130.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 130.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 130.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 130.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 129.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 129.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 128.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 128.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 128.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 127.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 126.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 126.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 126.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 126.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 124.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 123.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 121.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 119.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 118.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 117.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 115.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 114.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 114.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 111.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 110.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 109.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 107.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 105.5
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 104.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 94.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 93.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 89.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 88.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 86.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 86.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 81.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 80.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 80.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 77.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 75.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 74.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 70.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 68.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 64.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 62.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 58.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 58.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 54.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 53.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 53.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 46.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 46.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 30.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 24.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 24.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 15.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.2
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Brain - Putamen (basal ganglia)
Average nTPM: 112.3
Samples: 205

Max nTPM: 286.5
Min nTPM: 15.0
Std nTPM: 56.7
Median nTPM: 105.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 286.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 281.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 278.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 266.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 261.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 219.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 217.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 217.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 214.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 210.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 209.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 209.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 206.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 206.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 205.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 203.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 202.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 201.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 199.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 198.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 196.7
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 196.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 193.5
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 190.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 189.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 187.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 185.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 180.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 178.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 177.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 174.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 172.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 167.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 167.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 166.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 166.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 165.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 165.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 160.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 159.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 159.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 157.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 155.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 152.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 151.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 148.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 148.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 146.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 145.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 143.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 143.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 142.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 142.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 140.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 140.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 140.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 140.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 140.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 140.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 140.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 139.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 139.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 138.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 136.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 134.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 132.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 131.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 131.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 129.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 127.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 127.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 127.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 126.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 126.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 125.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 124.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 124.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 123.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 123.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 123.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 122.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 122.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 122.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 120.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 119.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 119.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 117.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 117.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 115.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 114.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 114.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 114.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 113.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 111.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 111.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 111.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 110.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 110.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 110.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 110.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 105.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 105.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 105.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 105.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 105.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 105.3
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 105.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 100.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 99.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 97.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 97.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 97.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 96.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 95.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 95.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 94.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 93.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 92.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 92.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 90.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 90.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 89.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 89.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 88.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 88.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 88.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 87.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 87.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 86.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 86.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 85.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 85.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 84.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 83.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 83.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 83.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 83.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 82.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 81.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 81.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 81.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 80.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 78.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 78.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 78.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 77.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 75.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 75.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 73.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 73.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 71.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 71.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 70.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 69.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 68.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 67.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 66.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 66.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 65.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 65.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 63.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 63.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 61.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 61.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 61.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 60.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 58.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 56.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 55.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 55.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 54.1
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 53.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 53.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 51.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 51.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 50.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 50.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 50.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 50.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 43.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 41.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 41.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 40.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 40.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 38.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 38.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 33.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 32.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 27.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 26.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 26.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 24.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 21.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 20.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 19.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 18.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 17.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 15.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 15.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.3
FF:10164-103B2 76 years, female 117.3
Nucleus accumbens
Scaled Tags Per Million: 61.5
FF:10037-101F1 23-56 years, mixed 61.5
Putamen
Scaled Tags Per Million: 115.7
FF:10176-103C5 60 years, female 115.7
Globus pallidus
Scaled Tags Per Million: 20.4
FF:10175-103C4 60 years, female 31.3
FF:10161-103A8 76 years, female 9.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

180.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 180.1
Samples: 4

Max nTPM: 221.6
Min nTPM: 141.1
Sample A Male 198.5
Sample B Male 221.6
Sample C Female 141.1
Sample D Female 159.2
Septum
nTPM: 140.2
Samples: 4

Max nTPM: 178.4
Min nTPM: 97.3
Sample A Male 97.3
Sample B Male 178.4
Sample C Female 133.2
Sample D Female 152.0
Ventral forebrain
nTPM: 100.5
Samples: 4

Max nTPM: 109.8
Min nTPM: 87.1
Sample A Male 103.6
Sample B Male 101.3
Sample C Female 109.8
Sample D Female 87.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.3
73788010 Antisense, RP_051213_01_A05, Mouse strain C57BL/6J (56 days, male) 15.2
69671905 Antisense, RP_050428_02_F01, Mouse strain C57BL/6J (56 days, male) 13.4
Pallidum
Expression energy: 7.3
73788010 Antisense, RP_051213_01_A05, Mouse strain C57BL/6J (56 days, male) 7.8
69671905 Antisense, RP_050428_02_F01, Mouse strain C57BL/6J (56 days, male) 6.8

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