PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		96.778
Mouse brain, Intensity
Ponsi 		89.614
RNA expressioni
HPA Brain:140.1 nTPM
FANTOM5:14.6 Scaled Tags Per Million
Mouse:30.7 nTPM
Allen mouse:3.1 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA013998
Medulla oblongata mean intensity 96.778
intensityi
FRONT BACK
Nucleus of the solitary tract 53.839
Raphe magnus nucleus 63.931
Cochlear nucleus 60.116
Lateral paragigantocellular nucleus 17.344
Raphe pallidus nucleus 37.139
Facial nucleus 11.249
Hypoglossal nucleus 4.446
Ambiguus nucleus 7.240
External cuneate nucleus 51.167
Inferior olivary nucleus 46.527
Raphe obscures nucleus 48.359
Dorsal motor nucleus of vagus -
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 13.482
Parabrachial nucleus 89.614
Principle sensory trigeminal nucleus 44.564
Locus coeruleus -
Pontine nucleus 20.666
Vestibular nucleus 27.109
Pontine reticular nucleus, oral 5.507
Lateral lemniscus 38.326
Superior paraolivary nucleus 8.554

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 140.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 9.3
2301 Female, age 85, both hemispheres 12.5
2090 Male, age 80, both hemispheres 11.2
2188 Female, age 91, both hemispheres 9.3
1984 Male, age 76, both hemispheres 4.2
Area postrema
nTPM: 14.3
2054 Male, age 76, both hemispheres 30.8
2799 Male, age 61, both hemispheres 7.3
2306 Male, age 80, both hemispheres 4.7
Dorsal cochlear nucleus
nTPM: 16.9
2187 Female, age 91, both hemispheres 27.0
2058 Male, age 76, both hemispheres 18.8
2370 Male, age 61, both hemispheres 15.0
2378 Male, age 80, both hemispheres 11.8
2802 Male, age 74, right hemisphere 11.7
Dorsal medullary reticular nucleus
nTPM: 19.5
2040 Female, age 85, both hemispheres 21.7
2088 Male, age 76, both hemispheres 18.4
2373 Male, age 61, both hemispheres 18.4
Dorsal motor vagal complex
nTPM: 30.7
2844 Male, age 55, unknown 57.5
2813 Female, age 72, unknown 37.0
2133 Female, age 91, both hemispheres 34.0
2807 Female, age 85, both hemispheres 33.1
2643 Male, age 74, both hemispheres 28.0
2000 Male, age 74, unknown 25.8
2797 Male, age 61, both hemispheres 15.6
2185 Male, age 76, both hemispheres 14.9
Dorsal tegmental nucleus
nTPM: 25.1
1936 Male, age 76, left hemisphere 29.9
2358 Male, age 61, both hemispheres 28.6
2083 Male, age 80, both hemispheres 23.1
2326 Male, age 74, both hemispheres 18.7
Dorsolateral tegmental area
nTPM: 33.7
2141 Male, age 76, both hemispheres 57.0
2751 Female, age 85, both hemispheres 54.0
2360 Male, age 74, both hemispheres 21.8
2654 Male, age 80, both hemispheres 19.5
2337 Male, age 61, both hemispheres 16.3
Gigantocellular reticular nuclei, medullary
nTPM: 13.5
2314 Male, age 61, both hemispheres 20.2
1876 Female, age 85, both hemispheres 19.1
2022 Male, age 76, right hemisphere 17.2
2310 Male, age 80, both hemispheres 10.7
2387 Female, age 91, both hemispheres 8.2
2462 Male, age 74, both hemispheres 5.7
Gigantocellular reticular nuclei, pars
nTPM: 14.0
2084 Female, age 85, both hemispheres 29.4
2330 Male, age 80, both hemispheres 13.2
2336 Male, age 61, both hemispheres 12.8
2706 Male, age 80, both hemispheres 10.3
2168 Male, age 76, both hemispheres 4.3
Inferior olive
nTPM: 26.2
2379 Male, age 80, both hemispheres 36.5
2563 Male, age 74, both hemispheres 27.2
2628 Female, age 91, both hemispheres 25.8
2178 Male, age 61, both hemispheres 22.4
2085 Female, age 85, both hemispheres 19.0
Kolliker-Fuse nucleus
nTPM: 10.0
2163 Male, age 80, both hemispheres 13.7
2315 Male, age 76, right hemisphere 12.1
2793 Female, age 91, left hemisphere 4.3
Lateral lemniscal nuclei
nTPM: 3.3
2746 Female, age 85, left hemisphere 4.6
2036 Male, age 80, both hemispheres 3.3
2453 Male, age 74, right hemisphere 3.3
2169 Male, age 76, both hemispheres 2.7
2320 Female, age 91, left hemisphere 2.3
Lateral medullary reticular nucleus
nTPM: 21.5
2374 Male, age 61, both hemispheres 43.3
2804 Female, age 91, both hemispheres 40.6
2190 Female, age 85, both hemispheres 17.2
2305 Male, age 74, both hemispheres 11.4
2044 Male, age 76, both hemispheres 9.0
2852 Male, age 80, both hemispheres 7.3
Lateral parabrachial nucleus
nTPM: 14.2
2790 Male, age 61, both hemispheres 19.4
2792 Male, age 76, both hemispheres 15.1
2013 Male, age 80, both hemispheres 14.5
2139 Female, age 85, right hemisphere 7.8
Lateral vestibular nucleus
nTPM: 18.9
2311 Male, age 80, both hemispheres 19.3
2184 Male, age 76, both hemispheres 18.6
Locus coeruleus
nTPM: 140.1
2720 Male, age 74, both hemispheres 226.9
2014 Male, age 55, unknown 166.4
2123 Female, age 91, both hemispheres 160.2
1980 Male, age 76, both hemispheres 118.6
2162 Male, age 80, both hemispheres 114.7
2788 Male, age 74, unknown 108.8
2317 Female, age 72, unknown 85.3
Medial olivary nucleus
nTPM: 12.9
2138 Female, age 91, both hemispheres 23.2
2851 Male, age 80, both hemispheres 14.0
1962 Male, age 76, both hemispheres 9.5
1943 Male, age 61, both hemispheres 5.0
Medial parabrachial nucleus
nTPM: 32.6
2463 Female, age 85, right hemisphere 53.1
2170 Female, age 91, both hemispheres 40.0
2786 Male, age 76, both hemispheres 33.9
2156 Male, age 61, both hemispheres 18.7
2854 Male, age 80, both hemispheres 17.4
Medial periolivary nuclei
nTPM: 5.4
2791 Male, age 74, right hemisphere 7.9
2458 Female, age 91, both hemispheres 5.8
2081 Male, age 80, both hemispheres 5.4
2063 Male, age 76, both hemispheres 4.3
2171 Female, age 85, both hemispheres 3.8
Medial vestibular nucleus
nTPM: 14.4
2134 Male, age 76, both hemispheres 23.8
2801 Male, age 74, both hemispheres 18.6
2624 Male, age 61, both hemispheres 15.7
2743 Female, age 85, both hemispheres 14.9
2803 Female, age 91, both hemispheres 8.3
2093 Male, age 80, both hemispheres 5.2
Motor facial nucleus
nTPM: 6.1
2126 Male, age 61, both hemispheres 14.0
2365 Male, age 74, right hemisphere 6.0
2327 Male, age 80, both hemispheres 5.7
2697 Female, age 85, both hemispheres 4.5
2062 Male, age 76, both hemispheres 3.5
2795 Female, age 91, both hemispheres 3.1
Motor hypoglossal nucleus
nTPM: 27.1
2277 Male, age 76, both hemispheres 42.3
2182 Male, age 80, both hemispheres 35.0
2461 Male, age 61, both hemispheres 34.9
2132 Female, age 85, both hemispheres 13.9
2125 Female, age 91, both hemispheres 9.1
Motor trigeminal nucleus
nTPM: 13.2
2321 Female, age 91, both hemispheres 19.2
2335 Male, age 61, both hemispheres 18.5
2309 Male, age 76, both hemispheres 16.9
2560 Male, age 74, both hemispheres 8.4
2079 Male, age 80, both hemispheres 3.0
Nuclei of the trapezoid body
nTPM: 4.6
2166 Male, age 80, both hemispheres 5.9
2159 Male, age 61, both hemispheres 5.1
2368 Female, age 91, both hemispheres 4.6
1983 Male, age 76, both hemispheres 3.8
2735 Female, age 85, both hemispheres 3.8
Nucleus ambiguus
nTPM: 13.2
2071 Male, age 76, both hemispheres 15.8
2096 Female, age 85, both hemispheres 10.6
Nucleus cuneatus
nTPM: 8.7
2562 Male, age 61, both hemispheres 21.9
2131 Male, age 76, both hemispheres 10.6
2376 Male, age 61, both hemispheres 9.5
2381 Male, age 80, both hemispheres 8.4
2805 Female, age 91, both hemispheres 7.8
2564 Male, age 74, both hemispheres 6.6
2100 Male, age 76, both hemispheres 5.1
2808 Female, age 85, both hemispheres 4.9
2380 Male, age 80, both hemispheres 3.7
Nucleus gracilis
nTPM: 8.6
2299 Female, age 85, both hemispheres 10.2
2627 Male, age 74, both hemispheres 8.8
2382 Male, age 80, both hemispheres 6.7
Nucleus raphe magnus
nTPM: 4.3
2051 Male, age 76, both hemispheres 6.0
2455 Male, age 74, both hemispheres 4.9
2172 Female, age 85, both hemispheres 4.4
2328 Male, age 80, both hemispheres 4.3
2459 Female, age 91, both hemispheres 3.9
2160 Male, age 61, both hemispheres 2.2
Nucleus raphe obscurus
nTPM: 13.7
2800 Male, age 61, midline 17.3
2142 Male, age 76, midline 12.4
2845 Female, age 85, midline 11.3
Nucleus raphe pallidus
nTPM: 20.8
2183 Male, age 80, midline 49.1
2145 Male, age 76, midline 9.7
1924 Male, age 61, midline 3.6
Nucleus tractus solitarii
nTPM: 35.9
2307 Male, age 80, both hemispheres 51.5
2656 Male, age 76, both hemispheres 50.8
2191 Female, age 85, both hemispheres 33.4
2144 Female, age 91, right hemisphere 8.0
Paramedian reticular nucleus
nTPM: 20.8
2313 Male, age 61, both hemispheres 38.6
2052 Male, age 76, both hemispheres 16.1
2057 Male, age 80, both hemispheres 14.8
2050 Female, age 85, both hemispheres 13.8
Parvicellular reticular nuclei
nTPM: 15.0
2119 Male, age 80, both hemispheres 25.4
2095 Male, age 76, both hemispheres 13.9
2558 Male, age 74, both hemispheres 5.8
Parvicellular reticular nuclei, medullary
nTPM: 22.7
2181 Male, age 80, left hemisphere 27.7
2189 Female, age 91, both hemispheres 22.6
2091 Female, age 85, both hemispheres 17.8
Pedunculopontine tegmental nucleus
nTPM: 36.7
2334 Male, age 80, both hemispheres 56.3
1921 Female, age 85, both hemispheres 28.9
2338 Male, age 61, both hemispheres 25.0
Peritrigeminal nucleus
nTPM: 10.4
2067 Female, age 85, both hemispheres 14.4
2136 Male, age 76, both hemispheres 8.4
2179 Male, age 61, both hemispheres 8.4
Pontine nuclei
nTPM: 3.8
2115 Male, age 80, left hemisphere 5.8
2109 Female, age 72, unknown 4.3
1968 Male, age 76, left hemisphere 4.0
2319 Female, age 91, both hemispheres 4.0
2787 Female, age 85, both hemispheres 3.4
2727 Male, age 61, right hemisphere 3.0
1863 Male, age 55, unknown 2.9
2454 Male, age 74, left hemisphere 2.8
Pontine raphe nucleus
nTPM: 79.9
2853 Male, age 76, midline 126.2
2122 Female, age 85, midline 33.5
Posteroventral cochlear nucleus
nTPM: 14.4
2752 Female, age 85, both hemispheres 23.0
2070 Male, age 76, both hemispheres 20.8
2371 Male, age 61, both hemispheres 10.3
2341 Male, age 80, both hemispheres 10.0
2135 Female, age 91, both hemispheres 8.2
Prepositus hypoglossal nucleus
nTPM: 20.2
2855 Female, age 85, right hemisphere 25.8
2086 Male, age 80, both hemispheres 14.7
Principal sensory trigeminal nucleus
nTPM: 6.5
2324 Male, age 76, both hemispheres 13.0
2158 Male, age 61, both hemispheres 4.7
2367 Female, age 91, left hemisphere 4.4
2008 Male, age 80, left hemisphere 3.9
Reticular pontine nucleus, caudal
nTPM: 5.5
2559 Male, age 74, both hemispheres 10.4
2092 Male, age 76, both hemispheres 5.8
2332 Male, age 80, right hemisphere 3.7
2457 Female, age 91, both hemispheres 2.3
Reticular pontine nucleus, oral
nTPM: 28.9
2167 Male, age 76, both hemispheres 68.4
1939 Male, age 80, both hemispheres 51.9
2012 Female, age 85, both hemispheres 15.7
2361 Male, age 74, both hemispheres 5.0
2366 Female, age 91, both hemispheres 3.6
Reticulotegmental nucleus
nTPM: 21.5
2325 Male, age 76, both hemispheres 28.9
2452 Male, age 74, both hemispheres 21.5
2333 Male, age 80, both hemispheres 18.8
2322 Female, age 91, both hemispheres 16.8
Spinal trigeminal nucleus, caudal
nTPM: 13.8
2390 Female, age 91, both hemispheres 18.3
2308 Male, age 80, both hemispheres 15.9
2642 Male, age 74, both hemispheres 15.3
2447 Male, age 76, both hemispheres 11.4
2312 Male, age 61, both hemispheres 8.3
Spinal trigeminal nucleus, interpolar
nTPM: 13.8
2389 Female, age 91, both hemispheres 17.0
2033 Male, age 80, both hemispheres 14.2
2625 Male, age 61, both hemispheres 13.8
2386 Female, age 85, both hemispheres 13.0
2066 Male, age 76, right hemisphere 10.8
Spinal trigeminal nucleus, oral
nTPM: 19.2
1978 Male, age 76, both hemispheres 27.5
2164 Male, age 80, both hemispheres 18.0
2737 Female, age 85, both hemispheres 12.0
Spinal vestibular nucleus
nTPM: 11.8
2780 Male, age 80, both hemispheres 13.8
2186 Female, age 91, both hemispheres 13.3
2384 Male, age 74, both hemispheres 12.7
2796 Male, age 61, both hemispheres 11.4
2806 Female, age 85, both hemispheres 11.2
2748 Male, age 76, both hemispheres 8.1
Subcoeruleus area
nTPM: 30.2
2323 Female, age 91, left hemisphere 52.3
2369 Female, age 85, left hemisphere 40.1
2451 Male, age 74, both hemispheres 30.5
1958 Male, age 80, both hemispheres 22.6
2089 Male, age 76, left hemisphere 5.7
Superior olive
nTPM: 4.7
2364 Male, age 74, right hemisphere 8.7
2020 Male, age 76, both hemispheres 4.6
1875 Female, age 85, both hemispheres 3.8
2329 Male, age 80, right hemisphere 3.8
2561 Female, age 91, both hemispheres 2.7
Superior vestibular nucleus
nTPM: 19.7
2383 Male, age 74, both hemispheres 26.1
2015 Male, age 80, both hemispheres 18.0
2061 Male, age 76, both hemispheres 15.0
Ventral medullary reticular nucleus
nTPM: 19.8
2372 Male, age 61, both hemispheres 25.2
2060 Male, age 76, both hemispheres 14.4
Ventral periolivary nuclei
nTPM: 3.7
2130 Female, age 85, both hemispheres 5.2
2165 Male, age 80, both hemispheres 3.7
2023 Male, age 76, both hemispheres 3.5
2794 Female, age 91, left hemisphere 2.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 17.1
2180 Male, age 61, both hemispheres 25.4
2302 Female, age 91, both hemispheres 23.0
2118 Male, age 80, both hemispheres 16.0
2741 Female, age 85, both hemispheres 13.1
1986 Male, age 76, both hemispheres 8.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 13.0
2359 Male, age 61, both hemispheres 42.6
2840 Female, age 85, both hemispheres 16.8
2449 Male, age 74, both hemispheres 5.8
2161 Male, age 80, both hemispheres 5.1
1959 Male, age 76, both hemispheres 4.1
2456 Female, age 91, both hemispheres 3.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 14.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 14.6
FF:10165-103B3 76 years, female 22.1
FF:10182-103D2 60 years, female 7.1
Medulla oblongata
Scaled Tags Per Million: 4.4
FF:10038-101F2 18-64 years, mixed 6.9
FF:10155-103A2 76 years, female 3.5
FF:10174-103C3 60 years, female 2.8
Pons
Scaled Tags Per Million: 2.8
FF:10033-101E6 18-54 years, mixed 2.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 30.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 30.7
Samples: 4

Max nTPM: 33.0
Min nTPM: 27.9
Sample A Male 33.0
Sample B Male 30.3
Sample C Female 31.6
Sample D Female 27.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.1
69671905 Antisense, RP_050428_02_F01, Mouse strain C57BL/6J (56 days, male) 3.6
73788010 Antisense, RP_051213_01_A05, Mouse strain C57BL/6J (56 days, male) 2.6
Pons
Expression energy: 3.0
69671905 Antisense, RP_050428_02_F01, Mouse strain C57BL/6J (56 days, male) 3.4
73788010 Antisense, RP_051213_01_A05, Mouse strain C57BL/6J (56 days, male) 2.6

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